Os12g0143800

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Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0143800| Description = Similar to Disrupted meiotic cDNA 1 protein (Fragment)| Version = NM_001072670.1 GI:115487301 GeneID:4351482| Length...")
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Gene Name

Os12g0143800

Description

Similar to Disrupted meiotic cDNA 1 protein (Fragment)

Version

NM_001072670.1 GI:115487301 GeneID:4351482

Length

4227 bp

Definition

Oryza sativa Japonica Group Os12g0143800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2153104..2157330

Sequence Coding Region

2153379..2153423,2153665..2153831,2153917..2153995,2154087..2154155,2154237..2154329
,2154411..2154477,2154579..2154640,2154729..2154774,2155359..2155404
,2155490..2155547,2155717..2155755,2155849..2155920,2156067..2156158
,2157036..2157135

Expression

GEO Profiles:Os12g0143800

Genome Context

<gbrowseImage1> name=NC_008405:2153104..2157330 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2153104..2157330 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgccgtccaagcagtacagcgaaggcgggcagctccagctcatggacgccgagaggatcgaggaggaggaggagtgcttcgagtccatcgacaagctaatctcgcaagggataaactctggagatgtgaagaagctgcaggatgctggtatctacacttgcaatggcctcatgatgcatacaaagaagagcctgacaggaatcaagggattatctgaagcaaaggtagacaagatctgcgaagcagccgaaaaacttctgagtcagggcttcataacaggaagtgatctccttattaagcggaaatctgttgttcgaatcaccactgggagccaggcgcttgacaagctgcttggcggagggattgaaacactttgcatcacagaggcatttggagaatttcgatcagggaagacccagttggctcacactctatgcgtctccgctcagcttccaatccacatgcatggggggaacgggaaggttgcttacattgatactgagggaacattccggcctgaacgaattgtgccgattgctgagagatttgggatggatgccaatgctgttcttgataatatcatatatgctcgtgcatacacctatgagcaccagtacaaccttctccttggccttgccgctaagatggctgaagagcctttcaggcttctgattgtggattctgtgatcgcactattccgtgtcgatttcagtggcaggggtgaacttgcagagcgccagcaaaaattggcacagatgctctcccgccttactaaaatagctgaggagttcaatgttgcagtgtacatcaccaaccaagtgattgccgacccaggtggtggaatgttcataactgacctgaaaaaaccagcgggaggccacgtgctggcgcatgcagctaccatccggttgatgctgaggaaaggcaaaggagagcagcgtgtctgcaagatctttgatgcccctaacctgcctgagggagaagctgttttccaggtaacatcaggtggaataatggatgcgaaagactga</cdnaseq>

Protein Sequence

<aaseq>MAPSKQYSEGGQLQLMDAERIEEEEECFESIDKLISQGINSGDV KKLQDAGIYTCNGLMMHTKKSLTGIKGLSEAKVDKICEAAEKLLSQGFITGSDLLIKR KSVVRITTGSQALDKLLGGGIETLCITEAFGEFRSGKTQLAHTLCVSAQLPIHMHGGN GKVAYIDTEGTFRPERIVPIAERFGMDANAVLDNIIYARAYTYEHQYNLLLGLAAKMA EEPFRLLIVDSVIALFRVDFSGRGELAERQQKLAQMLSRLTKIAEEFNVAVYITNQVI ADPGGGMFITDLKKPAGGHVLAHAATIRLMLRKGKGEQRVCKIFDAPNLPEGEAVFQV TSGGIMDAKD</aaseq>

Gene Sequence

<dnaseqindica>3908..3952#3500..3666#3336..3414#3176..3244#3002..3094#2854..2920#2691..2752#2557..2602#1927..1972#1784..1841#1576..1614#1411..1482#1173..1264#196..295#acttcgtcgtcttcctctgctgcttccttctcctccaagcccccgctccgctccgacgacctcgccgcctccgcctacaggtgaggaggtttttctccgccgcggcggacgcctccgctcgccgttctcgcttgggtttttgggtgattctggttgggttctcccctgatcgcacatttcgacgcaggtgggcagatggcgccgtccaagcagtacagcgaaggcgggcagctccagctcatggacgccgagaggatcgaggaggaggaggagtgcttcgagtccatcgacaagcgtacgccctccgcctcatctccatcccttcctccccctgtctcgtatcccgcactgcattgcttggcgcgcctgctcgtgtgcgttcgtgtgtgttcgcgtgtgttcgcgcgtgcgagtggcagtgctcgttctgcctcgcctttcaattagtcgctgttcgacttgtagttcgatgcttgattcgcggtgaagtaaacgagatttagcattagtacgtttccactttttttttgttggtttcgattctgcttgcgagcagcgtctggatgctttgtgatgtgcgtgttgggttgcttctagttttccccccaatttcgtgcgttctggacataaattagcctcgtctcgtgacgaatttgttctggaattttcgccgctccacaattgatctctgtttttgggctatttcctgctgatcggtgtgtggatcgccacatcgcttgctatgagaggatcgattagaatttatccccatttttagtcaaatttacacgcgttttgcattaacccgtcaaaatgatcgctggaactcgtcggaattctccaccggctagtttaaacatttgcattttctgcatattagttgaatcagttgtgtgttttggtgcacttggagtgcatttagttgaaccagttgtgtatgggtgcacttggaggtttagggattaagcttgagttcctcttgcactttacgttttctggtggctccctaactctagcgagttcaattttagtaagttgtttggtgtgatcctgacatttgcctgtgtttcatgcttcatttggttcttcctgcaaattattcattgccgtgaattcaaactaatgagcatagttcctgcattactgttcatctctggtgcacttgtctacagtaatctcgcaagggataaactctggagatgtgaagaagctgcaggatgctggtatctacacttgcaatggcctcatgatgcatacaaagaaggttgtgaactcgggatcccaaaccttcatgccatctcctgcttgttccatttctggtttatgacacccatcttctttcgtttgttctatttctttcttacagtatgcttatctgatattgtttcaatatatggattcatcttgtagagcctgacaggaatcaagggattatctgaagcaaaggtagacaagatctgcgaagcagccgaaaaacttctggtgtggttctcttttcattattaaagtctgaaagcttcactgtcaattctgtgtgatacattcttctgaaattgctatatttgtttttctcagagtcagggcttcataacaggaagtgatctccttattaaggtaaggaaataggagctaatctgcatacagcatactagtgtacaggatatggtgttatagcaaactaagtggaaactattccttgcttcatggatgctctagagcttttagttactccagctgtgcacttccctgggctgtttggtttattctttttcttcttttgaagcggaaatctgttgttcgaatcaccactgggagccaggcgcttgacaagctgcttggcggtagcatatatagtcctctgattatgttatgatcagttgttgcattatgttgttctaatctattttcattcttcaaattttcaaggagggattgaaacactttgcatcacagaggcatttggagaatttcggtgcgtagacgttcttgttccttttgattctttttcctggattacaactgcagattggttgtaccaatggaatgtggccatatctgtctaatagatatggtgaaaatctagcttagcaatatgtttagtattctggttgaagttaatttgctaaggctgttgtgctcccatttttatcatttattcatgccagtatatacagtaaattcctaaatatgtttgtattctgctaacactgagaacttaatactcctcatgtgtaaacttcaggcatatacacatcaatattgtctgaaactgttttctttgatgttaatactaaattggttctactaaacattaaatttagctgagataatcttgttttgcgacaaagttgatgtattatagaatgattccttgaattgcagcttggaacaatttggctttgtgtagcacataaataaaacatcttactatttaatgtgaaccagccaaactttgacccttgatgtactttgatttaacgttcatcattcgtcaatttggttccagcttcttagctttgtaatttgtaatctgtcatctttatttttggtcctcagatcagggaagacccagttggctcacactctatgcgtctccgctcaggttcatttccgacacatttttgtcatcaacaccttactaccatagatccaatgaataattttatttattttttgtttgtgaactgcagcttccaatccacatgcatggggggaacgggaaggttgcttacattgatactgagggaacattgtatcttttgaatttactgagtaataactcagctgattcactcaatggatttatttgcatttccatatcgccccaacttgtttccttaatggaattttcagccggcctgaacgaattgtgccgattgctgagagatttgggatggatgccaatgctgttcttgataatgtatggctcttaatttgtctttaccatttcaggcctaacagatgaagctgtatgttatatttccatttatttcttgtttagatcatatatgctcgtgcatacacctatgagcaccagtacaaccttctccttggccttgccgctaagatggctgaagagcctttcaggcttctggtaggcatggctccataacataaaagaacattgataaatttgtgtatctcagttacttatgtggttgttttacctgagtagattgtggattctgtgatcgcactattccgtgtcgatttcagtggcaggggtgaacttgcagagcgccaggtattgtcaatatttgtgttggtagaaacaaaaaaaaatcataaagtagttgaaggcctaaagttatgtactaattactctgaacttgcagcaaaaattggcacagatgctctcccgccttactaaaatagctgaggagttcaatgttgcagtgtacatcaccaaccaaggtgagctttcaggactatcctgtatatcccaagaaagagtaacaccataagggatttcaaattacaagtgtcctccttgtttcagtgattgccgacccaggtggtggaatgttcataactgacctgaaaaaaccagcgggaggccacgtgctggcgcatgcagctaccatccggttgatgctgaggaaaggcaaaggagagcagcgtgtctgcaagatctttgatgcccctaacctgcctgagggagaagctatatccttttgtattatacatatacatgtttaccaaaacttcttgtgcaattggtaacttcggttcagtaggttgctaaaatattgattggtttttctttctttgttcagacttgctcctcaaactcttgtgatttagttaattgcagatgctgttttcggtgactggaagtccaaaagctttgcataacagattattaatggtgtggtgtaaaatagttgcttcccttgaccaataacacgttttccaggtaacatcaggtggaataatggatgcgaaagactgaatgttcattgagggtgcttcctgtcttcaaattattcaggtttctcctagtaaattcctgcataggccatataggtttggtacattgactaaactactactgctactttgccactgtcgaggaaatatgcaacctcatttatccagacgattataccttaaaatgggtatttttctatgcttatgagatcaacagttgtactgaaacaaatacagtattgtcttaagtgaaaaatatataagaggtttacatgatggtaactttccccagaaact</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0143800, RefSeq:Os12g0143800