BGIOSGA025605

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Revision as of 06:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025605| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025605, complete gene.| tag = P0443H1...")
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Gene Name

BGIOSGA025605

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025605, complete gene.

LocusTag

P0443H10.4

Ensembl Transcript ID

BGIOSGA025605-TA

Ensembl Protein ID

BGIOSGA025605-PA

Length

4331

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:13317060..13321390

Sequence Coding Region

13317060..13317662,13318870..13319077,13319159..13319235,13319320..13319359,13319470..13319530
,13320180..13320249,13321074..13321278,13321374..13321390

Genome Context

<gbrowseImage1> name=IndicaChromosome07:13317060..13321390 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:13317060..13321390 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGAATAAGCACCAATCAGCTCTACAATTCTGGAATTCCGGTGACTGTGCCATCGCCTCTGCCTGCTATACCAGCTACCCTGGATGAAAACATTCCCAGGATTCCAGATGGGCAGAATGTTCCGCGGGAGAGAGAATTGAGAAGCACACCTATGCCACCTCATCAGAATCAGAGTACTGTTGCTCCTCTTCATGGGCATTTTCAGTCCAGTACCGGGTCTGTTGGGCCTCTGCGTTCGTCCCAGGCGATAAGGTTCTCTTCAGTTTCAAGCAATGAGCAATATACAAATGCCAATCCTTACAATTCTCAACCGCCGAGTAGTGGGAGTTCTTCAACGCTCAATTATGGATCACAATATGGAGGCTTTGAACCTTCCTTGACTGATTTTCCAAGAGATGCTGGGCCGACGTGGTGTCCTGATCCAGTTGATGGCTTGCTTGGATATACAGATGATGTCCCTGCTGGGAACAATTTGACTGAAAACAGTTCTATTGCAGCTGGTGATGAACTTGCCAAGCAAAGTGAATGGTGGAATGATTTTATGAATTATGACTGGAAAGATATTGATAACACAGCTTGTACTGAAACTCAACCACAGGTTGGACCAGCTGCGCAATCATCTGTCGCAGTTCACCAATCAGCTGCCCAACAATCAGTTTCATCTCAATCAGGAGAACCTTCTGCAGTTGCTATACCCTCGCCCTCTGGTGCCTCCAATACCTCCAACTCCAAGACACGAATGAGATGGACTCCTGAACTTCATGAGCGCTTTGTAGATGCTGTCAATCTACTTGGTGGCAGTGAAAAAGCTACTCCCAAGGGTGTGTTAAAGCTAATGAAGGCAGACAATTTGACCATTTATCATGTTAAAAGTCACCTTCAGAAATACAGAACAGCTCGATACAGACCAGAATTGTCTGAAGGTTCTTCAGAAAAGAAGGCAGCCTCAAAAGAGGACATACCATCAATAGATCTGAAAGGAGGGAACTTTGATCTCACTGAGGCATTGCGTCTCCAGTTAGAACTCCAAAAGAGGCTTCATGAACAGCTTGAGATCCAAAGAAGTTTGCAGCTGAGAATTGAGGAGCAAGGGAAGTGCCTTCAGATGATGCTCGAGCAGCAGTGCATACCTGGGACAGACAAGGCGGTGGATGCTTCAACCTCAGCAGAAGGAACAAAGCCATCTTCTGATCTTCCAGAATCTTCTGCCGTGAAGGATGTTCCAGAAAACAGTCAGAACGGAATAGCCAAACAAACAGAATCAGGTGACAGATAA</cdnaseq>

Protein Sequence

<aaseq>MERISTNQLYNSGIPVTVPSPLPAIPATLDENIPRIPDGQNVPRERELRSTPMPPHQNQSTVAPLHGHFQSSTGSVGPLRSSQAIRFSSVSSNEQYTNANPYNSQPPSSGSSSTLNYGSQYGGFEPSLTDFPRDAGPTWCPDPVDGLLGYTDDVPAGNNLTENSSIAAGDELAKQSEWWNDFMNYDWKDIDNTACTETQPQVGPAAQSSVAVHQSAAQQSVSSQSGEPSAVAIPSPSGASNTSNSKTRMRWTPELHERFVDAVNLLGGSEKATPKGVLKLMKADNLTIYHVKSHLQKYRTARYRPELSEGSSEKKAASKEDIPSIDLKGGNFDLTEALRLQLELQKRLHEQLEIQRSLQLRIEEQGKCLQMMLEQQCIPGTDKAVDASTSAEGTKPSSDLPESSAVKDVPENSQNGIAKQTESGDR</aaseq>

Gene Sequence

<dnaseqindica>1..603#1811..2018#2100..2176#2261..2300#2411..2471#3121..3190#4015..4219#4315..4331#ATGGAGAGAATAAGCACCAATCAGCTCTACAATTCTGGAATTCCGGTGACTGTGCCATCGCCTCTGCCTGCTATACCAGCTACCCTGGATGAAAACATTCCCAGGATTCCAGATGGGCAGAATGTTCCGCGGGAGAGAGAATTGAGAAGCACACCTATGCCACCTCATCAGAATCAGAGTACTGTTGCTCCTCTTCATGGGCATTTTCAGTCCAGTACCGGGTCTGTTGGGCCTCTGCGTTCGTCCCAGGCGATAAGGTTCTCTTCAGTTTCAAGCAATGAGCAATATACAAATGCCAATCCTTACAATTCTCAACCGCCGAGTAGTGGGAGTTCTTCAACGCTCAATTATGGATCACAATATGGAGGCTTTGAACCTTCCTTGACTGATTTTCCAAGAGATGCTGGGCCGACGTGGTGTCCTGATCCAGTTGATGGCTTGCTTGGATATACAGATGATGTCCCTGCTGGGAACAATTTGACTGAAAACAGTTCTATTGCAGCTGGTGATGAACTTGCCAAGCAAAGTGAATGGTGGAATGATTTTATGAATTATGACTGGAAAGATATTGATAACACAGCTTGTACTGAAACTCAACCACAGGTATGACAGTTTCTGCTATTTTGGTGGCTGAACTTGGGGAGTAATTCTTCATTATCTAAGAACAATTCTACTCTTATTTGGCTAAACTATTTCCTAAATTAACTGTTGTTTCATGCTGTGATGTGTTCTTTGTTAGTGAGTTTGAAATGAAGCATCATCTTGATTATTGACTTTCTAAAATTATCCTTTTGTTTCTGCAACATCCAATTGTCCGTGACATTACCGTGTTTGATGCATATTATGTACGATGTGTTTATCAGATTAGTATATTTCGTTCTTCGTATCTCCAGCTCAAAACTGCCACTTAATAAATTATCTTTAGCATTATGGCAGTCTAGCGACCCCAATAAGATTTACATGTTTGCGTTGACAAATGCAATTATTCTTATATGTGACATGCAAGCAAAACGTCTACACTTTGCTTTGTTTAACAAATGTTTACTATAGATTGGATGTTTTCAATTGGGCATGCTTAGCCATGATGCATTTGACACCTAGATAGTTCAAAAATGCGATTATGCTCAAGATAAAAGGATGCAGTTGCTGCAACCTTGTAGTTTTCCTGGCTCCATATAACCAAGCAAAAAACATGATGACTTTACTGTATGTAGAATTGTGGAGAGTCATCTTGAATGAGCTTGGGCAGGCTTGACTTGGTTTGAACTGCATGTAGGTTTCTGCTCTTATTATGTATAAGTATGAATTATAGGGATTTTCTTGACAGAAGCTCAAATAGGCTCCATGTTTGCTCAAGAGAAGCTCAACAGGTTTAATAACATATCATAACCAAACTTCAGATCAGCTAAAATAGCATAGTGTTGTTTAAACTAAAATTTATACGACCAAGTTGCTTGACGGCTTGGTTGCCAGGGAACTCTCTCTCTCTCTCTTTTTTAAACAAAGAAAAGGGTATAATATTGACATACTTGTGAAGTTTTGAGCTTAACCAAGAATTTTTTTTTTAACCCTGAGATGATATCTAAATTTCTTTCTGGTTGATATCATCAGGATAAGCTTAGGCTTGTTTGGGTGGGTGCTGCCAGTTTCCAGTTGAGCTTGAATTAAGACTGTGGGATGTGTCACATGTAGTTATCCCTAAGTGCCCTATGCTATTCATTGTTGATGACTACTGCAAATTCTTTAGTTCCTAGTCTTCTAGACGCATCCAACATGTAATTGAGTGGTGCTCTATTTATCTTCAATATAGGTTGGACCAGCTGCGCAATCATCTGTCGCAGTTCACCAATCAGCTGCCCAACAATCAGTTTCATCTCAATCAGGAGAACCTTCTGCAGTTGCTATACCCTCGCCCTCTGGTGCCTCCAATACCTCCAACTCCAAGACACGAATGAGATGGACTCCTGAACTTCATGAGCGCTTTGTAGATGCTGTCAATCTACTTGGTGGCAGTGAAAGTGTGTATTGCTTTAAGAAATGTTACATCTCCTATGATTGAACTAATTATGCATATTGACATTTATTGTGAATTGTTGCAGAAGCTACTCCCAAGGGTGTGTTAAAGCTAATGAAGGCAGACAATTTGACCATTTATCATGTTAAAAGTCACCTTCAGGTCTGTTAGTTGTCCCTATTGCATGATATTTTTGTGAAAGAAAATTATTCTTATCTTTTCATTTTGAGTTAATTTATTTTGCAGAAATACAGAACAGCTCGATACAGACCAGAATTGTCTGAAGGTCTGCCACGTTCCACTTTTTCTGTGTTTTGCTGCATTCTTTTATTTATTTATTTTGTTGCCATGTATTATTTATTTTATTGCCATGTTCATCAATTTGAGATTTTTCAGGTTCTTCAGAAAAGAAGGCAGCCTCAAAAGAGGACATACCATCAATAGATCTGAAAGGAGGGTAAGTTTGAAATCTTCATGACTTCATTATGCTTCTACCTTGCGATCTCACTGCTGTGTTCTCTTTTATTCATTTGGAATCCTGTATTCAATCATATTATTAGCAAAACTGGTTCAGTGAAAGATTCTCCATTAAAAGGGGCTTTCTTGGTATAACAAAAGGAATAATTTGTTGATCAAATGCTTAAGATATTTTGTTGAGCAGCAAACTTTTTTTTTTGTAATAGGACAACAATACTCGTTACAGCACTGTGTTCTATATTGAAGTGGCTTGGAAACAATTCTTTATTACCAATAGATATTCTTATTCAAACTCGTTGACTCTCCTTGGTCTCCTTGGAACTTTCTCCTTTTGTATTTTCTGTTATTTATTTGTATCAAATGCAATTGTGTCTAGTGAACAGAAAGCAGTGATCTTCCACAATAAAAAAAAAAAATCTATCTGGTCTTTGTCTGGTCTAATGTTAGTCCTTCATTCTTGCTTGTATTTTGCCTACTAATCTGATCGCAAATATGGAATGTCCTGCTGTTTTTAGCCAACTTGTACCGCAAATATGCAATGGCCTGCTGTTTTAGCCAACTTGTTTGGGCATCCTTAACATTAGACCATCTTGTGAGGTCCGAGTGTTCATTCTTGTATTCTGTTGCAGGAACTTTGATCTCACTGAGGCATTGCGTCTCCAGTTAGAACTCCAAAAGAGGCTTCATGAACAGCTTGAGGTATGTAGCATACTAATGAATTGTTTTTCATGCTTTATATTTCTTCTGAAAGGAAGGTGGGGAAGGGCTTTGGTATGAAGTTCAGAATAAAGTAGGCAAGCTTCAAGCTATCATATAGTACTAGTGTAAGCTGACTTGTTTGAGCTCCATGCATATAAAGCAAAGAACGAATTAGCGCTTTATGGAGTTCTTTCTATTGTGAATTATATAACCGACCATTAACATCATATGTGGTAAGCAAATTGATTGGAGTATTAGGTGAAAAGGGTGCCTTAGGAAAAAAAAATCCAAAAGTATTTCAAACCAAGACCAACCGTTAAAATTAGCATATGGATGCAGTTATTATTTTGTTCAGGGTTTAGTTTTTTTTCCGTACATGTAGGTTCTTGCAATAGAGGGCATCACAGCTCATTAGGAAAATATGAACTTAGCTGTTAATTTCTAGTACTTTTTTGCCATATTTGTATTGTTTTCATCTGTTTTTCTTATCCTTTCATATCAACAGTCGGCTAAACCTGTTGTTGAACATTGTCTCTGCTCCTTTTTACTAGACATTCCTAGAAAAACTAGTTTCATGGATTAGCTAGGTCTGCCATAACAGGGGCCAGGGCATTGAAAATCTGCTAAGTCTGCTTTAGATGTTTTTGTCTATGAGATGCGTTAAAAATGAAGTAACCAAATTCCTTACCTAGTTGATTAACATGGATTATGAAGGAAGCTAGACCAACATCAAAGTGAACTTCTCATTTCCCCAAGCTGTTGACTGCAGGGTGTTGAACTTTCTGAAATTAACCCTTTTGGTTCAATGCTTATTTGCTCTGCAGATCCAAAGAAGTTTGCAGCTGAGAATTGAGGAGCAAGGGAAGTGCCTTCAGATGATGCTCGAGCAGCAGTGCATACCTGGGACAGACAAGGCGGTGGATGCTTCAACCTCAGCAGAAGGAACAAAGCCATCTTCTGATCTTCCAGAATCTTCTGCCGTGAAGGATGTTCCAGAAAACAGTCAGAACGGAATAGCCAAACAAACAGGCATGAGAATCCATTAAAGTCATATTCATGCTGCTGATACCAGCTTAATAATGTTGAGATTGAGATAATTGATGATCCTTAAATTTTTGTTTCAGAATCAGGTGACAGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025605