BGIOSGA025608

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Revision as of 06:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025608| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025608, complete gene.| tag = OsI_258...")
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Gene Name

BGIOSGA025608

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025608, complete gene.

LocusTag

OsI_25826

Ensembl Transcript ID

BGIOSGA025608-TA

Ensembl Protein ID

BGIOSGA025608-PA

Length

4143

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:13432258..13436400

Sequence Coding Region

13432258..13433018,13434360..13436400

Genome Context

<gbrowseImage1> name=IndicaChromosome07:13432258..13436400 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:13432258..13436400 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTTTCAGTTGTGCGCCTCGTCTTCTCCATGGTAGGCGAGGTGTGCCGCGTGATGGAGAAAGACGCGGAGCGGCATGACAGGCTCTACGGCGGCCTCCAGTCCATCAAGCTGGAGATGGAGATGGTGAACGCCCTGATCAAGGAGGAGGAGCCGGCCGGAGGAGCCGTGCGGGAGACGAGGATGCAGCAGCTGCAGGAGTTCGCGTACGACGTGGAGGATTTCGTGGAGGGCCTGTGGGAGGCAGGAGCGTACGGCAAGGTCCTCGTCGCCATAGGGATGGATCCCCGTGGCCAGCAGGTTCGAAGCATCGACCGCTTCAAGGAGAGAATAATCTCTCTACGGAAGGAATGGAAACCGCGGATCGGCGGTGAATCCAGCCATGTCGGTGGCGGCGGAGACGAAGAGGAGGAGGAGGAGTTGGATGAGCTTCTTCCTCTCGAGGGCATGGACGTGCCCAGGAGCCGAGTCGTTGAGCTGCTCTCGCCGTCGTCGCCGGCAGAGGGGCGGCAGCTGCGGGTGGTCTCCGTCGTGGGCTGCCGCGGTGTGGGGAAGACCTCCCTCGCACGAGCGATCTACAGGGATCCTTCCGTCTCCCACGCATTCGACTGCGTTGCTTGGGTTGATGCGTCGGGATGCAACACCAACAAGGCCCTTCTGCACAGGATTTTCGAAAGCGTTCGGGCGACGACGGAAAATGTTCCCATGGAAGCGGAAGGTGCTGCTTTCACCAATCTCCACACCATTTTGTCTCCCAAGAGGTACTTGGTCTTTATTGATGATGTGGAGCAAGCACAAGTGTGGAAAGATACAGTACATGCTTTCCCTGACAATGGCATGAATAGCAGAGTAATTGTGACCACGAGTGTTCATTCTGTCGCCGCAGCCTGCAGCGCTGGAAGTTACGTGTACAGTATGCAATGTCTTAGCGACGATGACTCAAAAAGTTTATTCTGGAGAAGGGTTTTTGGTTATCAAAGGATTCCTCCACATTCCCTGGTAATGGATTCAGAAAGCATCTTCAGTAAATGTGGTGGTTTACCACTGGCACTAGCTAGCGTAGCCAAACATTTGAATGTAAAAGGAGTAAGGTTAGACAGTAGTCACTGCAAAGAGGTGGGACAAAACCTAGGCAGAGACTACCTGCAGTCAGGTAACGGCATCTTTAAGGGAATGAGAAGAGTGCTAACGCAATGCTATGACAGCCTGCCTGACTATGAGCACAAGTCTTGCTTGCTTTACCTAAGCATATTCCCCAGGGGCCATCAGATTAAGAGCAAGAGCCTAGTAAGAAGATTAAGAGCTGAAGGGTTGGTCGTCAAAGAAGGCTGCAAATGTTTTGATGAGTTGGTTGACCGTTGTATTATTGAGCCAGTGCCGATTATCAACAATTCCGTAGTTGTCAAGAGCTGTCAGGTTCATGGTATAGTGCTGGAGTTTATCATTCAAAAGTCAGTAGAGAAAAATGTGGTTGCTCTAATCCGAGGTCATGATCCCCTACTTAAAAACAGCGCTGAGACCTGTGTCCGCCGACTCTCCATTCAGTCAAGCACCAAAGAAAGATTCGATGAACTTGCGGACAAATCTGCTTTGAGGTCGTTAACCATGTTCAAGAGTGAGCCATTTGATTTCCGGAGCTGCAAGATGCTGCGACTCCTTGATCTTGAAGGTTGCACTGACCTTGACAAGAGATTTCTTGAAGGCTTATGTCAGCTGTTGCTTCTCAGGTATCTCAGCCTCAGGAGAACTGGCATCAACAAGCTTCCCACCCAGATAGAGAAACTGCAACGTTTGGAGACGCTGGATATCCGAGAGACAAAAGTGGAGAAATTGCCCATGCAGGTCATAATGCTGCCAAAGCTAGCTTACCTGTTTGGCAGGTTTCAGCTACCTGACGTTCCCAATGGAAAAGTAACAAACACGCTCTCTGAGTTCCTGAAGAAGAAAAGTTCGCTGCACACTCTTGCTGGATTTGTTGCCAACAAGAGGCAAAGTCCTGAACATGTTATACTCCTCGCAAGAAACCTGAAGAAGGTGAAATTATGGTGCAACGAGGATGCCCGAAAGAGCTTTCTTGGTCCTGACCTTGGCGCCCCAAGCGGTTCACGAAGGAAAAGAGACTGTTGGGGCAAAACAAAATTAGAAGATAATTACTCTCATAGCATCACATCTGAAGAACGCCAAAGTAACAACTTTGATTTTATCAGGCTTCTTAAGATGCGCTTTACCTCTCTAGAGTCTGTATCCATTGTTTCCAGTGGACTTTGCAAAGACTTCTTGGGTTCTCTAGAGGGTCCATGCAACATCAGCTCTATCAAACTGCGGGGAAATTTGGACACACTGCCTGATTCTAACAAGTTGGGTGAGCTAGGTAGGATTAAGAAGCTGCATCTCTTCTCGACTGGTCTCAGCATCGAAGTTCTATCGGCCTTGCAATGCCTACGAGGATTGGAATACCTCAAGCTTGTAGAGCACAGCGATATATTTTGCAACGGCATTTTCATTGTGGAGAAAAACGGATTCGAAAGCCTTAAGAGCCTGTGGATCGAGTCTCCAATGCCTCCAAAAATGCGATTCAATGAAGGAGCCATGGAAAGCCTAACTTCCCTTCACCTTCTTTGTCCACATTCTCAGATGCAACAGCCATCCGAAATCGTCGAGGGCATCTCACATCTCTCGAATCTCAGTGAGGTGATACTCCACAGGTCAATGCAACGAGCTTGGGAAACACTGGCAACTGGGCACCCTAACCGGCCGTGTGTGAAGAGGCAACCAGAACCAGCTGCCAACACAGCAGAATAA</cdnaseq>

Protein Sequence

<aaseq>MVSVVRLVFSMVGEVCRVMEKDAERHDRLYGGLQSIKLEMEMVNALIKEEEPAGGAVRETRMQQLQEFAYDVEDFVEGLWEAGAYGKVLVAIGMDPRGQQVRSIDRFKERIISLRKEWKPRIGGESSHVGGGGDEEEEEELDELLPLEGMDVPRSRVVELLSPSSPAEGRQLRVVSVVGCRGVGKTSLARAIYRDPSVSHAFDCVAWVDASGCNTNKALLHRIFESVRATTENVPMEAEGAAFTNLHTILSPKRYLVFIDDVEQAQVWKDTVHAFPDNGMNSRVIVTTSVHSVAAACSAGSYVYSMQCLSDDDSKSLFWRRVFGYQRIPPHSLVMDSESIFSKCGGLPLALASVAKHLNVKGVRLDSSHCKEVGQNLGRDYLQSGNGIFKGMRRVLTQCYDSLPDYEHKSCLLYLSIFPRGHQIKSKSLVRRLRAEGLVVKEGCKCFDELVDRCIIEPVPIINNSVVVKSCQVHGIVLEFIIQKSVEKNVVALIRGHDPLLKNSAETCVRRLSIQSSTKERFDELADKSALRSLTMFKSEPFDFRSCKMLRLLDLEGCTDLDKRFLEGLCQLLLLRYLSLRRTGINKLPTQIEKLQRLETLDIRETKVEKLPMQVIMLPKLAYLFGRFQLPDVPNGKVTNTLSEFLKKKSSLHTLAGFVANKRQSPEHVILLARNLKKVKLWCNEDARKSFLGPDLGAPSGSRRKRDCWGKTKLEDNYSHSITSEERQSNNFDFIRLLKMRFTSLESVSIVSSGLCKDFLGSLEGPCNISSIKLRGNLDTLPDSNKLGELGRIKKLHLFSTGLSIEVLSALQCLRGLEYLKLVEHSDIFCNGIFIVEKNGFESLKSLWIESPMPPKMRFNEGAMESLTSLHLLCPHSQMQQPSEIVEGISHLSNLSEVILHRSMQRAWETLATGHPNRPCVKRQPEPAANTAE</aaseq>

Gene Sequence

<dnaseqindica>1..761#2103..4143#ATGGTTTCAGTTGTGCGCCTCGTCTTCTCCATGGTAGGCGAGGTGTGCCGCGTGATGGAGAAAGACGCGGAGCGGCATGACAGGCTCTACGGCGGCCTCCAGTCCATCAAGCTGGAGATGGAGATGGTGAACGCCCTGATCAAGGAGGAGGAGCCGGCCGGAGGAGCCGTGCGGGAGACGAGGATGCAGCAGCTGCAGGAGTTCGCGTACGACGTGGAGGATTTCGTGGAGGGCCTGTGGGAGGCAGGAGCGTACGGCAAGGTCCTCGTCGCCATAGGGATGGATCCCCGTGGCCAGCAGGTTCGAAGCATCGACCGCTTCAAGGAGAGAATAATCTCTCTACGGAAGGAATGGAAACCGCGGATCGGCGGTGAATCCAGCCATGTCGGTGGCGGCGGAGACGAAGAGGAGGAGGAGGAGTTGGATGAGCTTCTTCCTCTCGAGGGCATGGACGTGCCCAGGAGCCGAGTCGTTGAGCTGCTCTCGCCGTCGTCGCCGGCAGAGGGGCGGCAGCTGCGGGTGGTCTCCGTCGTGGGCTGCCGCGGTGTGGGGAAGACCTCCCTCGCACGAGCGATCTACAGGGATCCTTCCGTCTCCCACGCATTCGACTGCGTTGCTTGGGTTGATGCGTCGGGATGCAACACCAACAAGGCCCTTCTGCACAGGATTTTCGAAAGCGTTCGGGCGACGACGGAAAATGTTCCCATGGAAGCGGAAGGTGCTGCTTTCACCAATCTCCACACCATTTTGTCTCCCAAGAGGTCTGTACTCTAGTCCATTTTCCTCTCTTGGGCGCGACTCTTCTACTCTATCAATTTCATGTATCATAATCCACTATTGCATTAAGGCCGTCTCCAATGGCTATATATAGCTACTTGCTAGCTTTTAGTGCCTACATGGCATATTCATCTCAACTATATATAGATAGCACAAAATTGATTCATCCAATGGTGATCTTCTGTATATGGTTGACCACAAATTTTTATACAATAGATAATAAGCCGCAGCCTCAACACCCATAAATGAAGTAATGAACATATATTATACAGCCAAATACTACATGAATATTTATATTCCAAGTCTCGTAACTAAGAAACAACACAAAGAAATACTAGAAGACCAAGCTTCCACCAAATCATATAAAGTTTATCTTGATATGCAATCCAAACTCATGCATGTTACATTTGCTTTCCATCTAACTTTGGTCCCTGCCTCTCTCCTTTGGCCAAATCCTCTCGATCCAAATCCGACTGCTCTCTTTGGCCCTAGTGCCTTCGCTCATTTTACCGTCATACAACATATTCGGGCACGAACATCTTGTTAGAAAACGATAGACAAATAAACGATAAATAACAATAGATCAATCACAGAAGACACGAGATTTAACGTGGAAGAGCATGAGAGAAAAATTGCGGGCGCCAGCCAGCAAAATATCTTCACTATATCGGGGTGAGGTTACAACGCCGAACGGCGGCTTACGTGAAACCGTAAAAGGATAACGATCCACTTCGCTCCGGCCCAAGCCTTCGGCGACGAGCCTCCACTTCGCTCCGTCCGATGCTGGCCTTTATACGTGTGCAAATGAATTTGGATCACAGCTTAACACATCTCATACCCAATGAAACTTGGGCCCTATATTCAGAGTGACGCACCATCCATCCAATACAACAATAGATTTTAGCTTCCTTGACAGATTCTCTGTGACGAACAAGGAATCTGTAATTGATATATGATGATTTCGCTAGTTATTGACAAAAGTGTGTCGTCAAGGAAGGCTAGGACCATTGTAGTTATCGGCATTTCCAATAAACACTTCATCATCCTACCGGATCCTGCCATTAGATTAGAAAATCATACAGGATCCTGCCTATTGGCAGGGCCTCTTTATTCACACACTCTCTTCCACGAATACAAAAAAAGTTGATGTGGTCATGCTTATAGACAGCTGCCATGCACTGTTGGAGAAATTGTTTCAAAAGAGGCCCTCACCTCACATAAACTATTCTTCATCTAAGGTCTTGCGCCGACAAATTTTTTTGTGATCAAACACCACAAGTATATGAATGTTTTATATAAACTGTATTTCCTACCTGCTTTGCTAGGTACTTGGTCTTTATTGATGATGTGGAGCAAGCACAAGTGTGGAAAGATACAGTACATGCTTTCCCTGACAATGGCATGAATAGCAGAGTAATTGTGACCACGAGTGTTCATTCTGTCGCCGCAGCCTGCAGCGCTGGAAGTTACGTGTACAGTATGCAATGTCTTAGCGACGATGACTCAAAAAGTTTATTCTGGAGAAGGGTTTTTGGTTATCAAAGGATTCCTCCACATTCCCTGGTAATGGATTCAGAAAGCATCTTCAGTAAATGTGGTGGTTTACCACTGGCACTAGCTAGCGTAGCCAAACATTTGAATGTAAAAGGAGTAAGGTTAGACAGTAGTCACTGCAAAGAGGTGGGACAAAACCTAGGCAGAGACTACCTGCAGTCAGGTAACGGCATCTTTAAGGGAATGAGAAGAGTGCTAACGCAATGCTATGACAGCCTGCCTGACTATGAGCACAAGTCTTGCTTGCTTTACCTAAGCATATTCCCCAGGGGCCATCAGATTAAGAGCAAGAGCCTAGTAAGAAGATTAAGAGCTGAAGGGTTGGTCGTCAAAGAAGGCTGCAAATGTTTTGATGAGTTGGTTGACCGTTGTATTATTGAGCCAGTGCCGATTATCAACAATTCCGTAGTTGTCAAGAGCTGTCAGGTTCATGGTATAGTGCTGGAGTTTATCATTCAAAAGTCAGTAGAGAAAAATGTGGTTGCTCTAATCCGAGGTCATGATCCCCTACTTAAAAACAGCGCTGAGACCTGTGTCCGCCGACTCTCCATTCAGTCAAGCACCAAAGAAAGATTCGATGAACTTGCGGACAAATCTGCTTTGAGGTCGTTAACCATGTTCAAGAGTGAGCCATTTGATTTCCGGAGCTGCAAGATGCTGCGACTCCTTGATCTTGAAGGTTGCACTGACCTTGACAAGAGATTTCTTGAAGGCTTATGTCAGCTGTTGCTTCTCAGGTATCTCAGCCTCAGGAGAACTGGCATCAACAAGCTTCCCACCCAGATAGAGAAACTGCAACGTTTGGAGACGCTGGATATCCGAGAGACAAAAGTGGAGAAATTGCCCATGCAGGTCATAATGCTGCCAAAGCTAGCTTACCTGTTTGGCAGGTTTCAGCTACCTGACGTTCCCAATGGAAAAGTAACAAACACGCTCTCTGAGTTCCTGAAGAAGAAAAGTTCGCTGCACACTCTTGCTGGATTTGTTGCCAACAAGAGGCAAAGTCCTGAACATGTTATACTCCTCGCAAGAAACCTGAAGAAGGTGAAATTATGGTGCAACGAGGATGCCCGAAAGAGCTTTCTTGGTCCTGACCTTGGCGCCCCAAGCGGTTCACGAAGGAAAAGAGACTGTTGGGGCAAAACAAAATTAGAAGATAATTACTCTCATAGCATCACATCTGAAGAACGCCAAAGTAACAACTTTGATTTTATCAGGCTTCTTAAGATGCGCTTTACCTCTCTAGAGTCTGTATCCATTGTTTCCAGTGGACTTTGCAAAGACTTCTTGGGTTCTCTAGAGGGTCCATGCAACATCAGCTCTATCAAACTGCGGGGAAATTTGGACACACTGCCTGATTCTAACAAGTTGGGTGAGCTAGGTAGGATTAAGAAGCTGCATCTCTTCTCGACTGGTCTCAGCATCGAAGTTCTATCGGCCTTGCAATGCCTACGAGGATTGGAATACCTCAAGCTTGTAGAGCACAGCGATATATTTTGCAACGGCATTTTCATTGTGGAGAAAAACGGATTCGAAAGCCTTAAGAGCCTGTGGATCGAGTCTCCAATGCCTCCAAAAATGCGATTCAATGAAGGAGCCATGGAAAGCCTAACTTCCCTTCACCTTCTTTGTCCACATTCTCAGATGCAACAGCCATCCGAAATCGTCGAGGGCATCTCACATCTCTCGAATCTCAGTGAGGTGATACTCCACAGGTCAATGCAACGAGCTTGGGAAACACTGGCAACTGGGCACCCTAACCGGCCGTGTGTGAAGAGGCAACCAGAACCAGCTGCCAACACAGCAGAATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025608