BGIOSGA025635

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Revision as of 06:31, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025635| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025635, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA025635

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025635, complete gene.

LocusTag

OSJNBA0027N13.120

Ensembl Transcript ID

BGIOSGA025635-TA

Ensembl Protein ID

BGIOSGA025635-PA

Length

4580

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:14335863..14340442

Sequence Coding Region

14335863..14336278,14336354..14336495,14336843..14337207,14337285..14337444,14337850..14338187
,14338289..14338466,14338605..14339138,14339327..14340442

Genome Context

<gbrowseImage1> name=IndicaChromosome07:14335863..14340442 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:14335863..14340442 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGACATGGACTAGCAATGCAGAAATTTATTTATCATACAATGTTGAGCAGGAAGTAGAGGAGCACGGCGCTTCCGATAAAGTTGTCATGGAGAACATTCTGTCAAACAATGATTTTTCGGAAGGTCTACATTTGTGGCATCCTAATGGTTGCCATGGATTTGTGGCTGTTGAAGGATCAGGTTATCATCATGGAATAAGGCCTCACTCAGGGTCAAATTATGCCGTACTTACTCGTCGCACACATAATTGGCAAGGGCTTGAGCAGGACATAACAGAAAAGGTCACTGTTGGTACTGAGTACATTGTTGCTGCCCATGTCAGAGTCCATGGTGAACTCAATGAGCCTGTTGGAATTCAGGCCACTCTAAAACTTGAGGGCGATGGTTCTTCTACGAACTATCAATCAGTTGCAAGGATCTCAGCATCAAAAGACTGTTGGGAGAAGTTGGAAGGTTCATTTGAACTAAAAACTCTACCAAGACGTTTGGTATTCTACATTGAAGGCCCCCCTCCTGGTGTAGACTTGCTCATAGATTCAGTCACCATCTCCTACAAGAAAACAGAGCGGGCTGCATCCAAACTGGTTAGTGGAACAGAAAACATCATTTCAAATTATGATTTTTCGGAAGGCCTTCATTTGTGGAACCCTATCTGCTGTCATGCATATGTGGCATCTCAATGGTCTGGTTTCCTTGATGGTATTAGAGGGAGCTCAGGAGAAAATTATGCTGTAGTTTCGAAGAGAACTGAAAGCTGGCAAGGTCTTGAACAAGATATTACAGATAAAGTATCTGCTGGTACTGCTTATGCAGTATCAGCCTATGTTAGAGTTGATGGGAATATCCATACGAAAGTTGAAGTTAAAGCAACCTTGAGGTTGCATAACACAGATGATTCAACACACTACAGTCCAGTTGGAAGCCTGTTAGCTTCAAAAGAAAAGTGGGAGAAGATGGAAGGATCCTTTTGCTTGACAAATATGCCAAAACGTGTAGTATTCTACCTGGAAGGACCTCCTGCTGGCGTGGACCTTATCATTGATTCCGTAAATATAACTTGCTCTGGATATCAGCAGTTAAAAGAAGTAAAAGTACCAAGTGGAGTTGATACCATCGTTAAGAATCCTCACTTTGACGAAGGGTTAAACAATTGGTCTGGAAGAGGATGCAATATCTGTAGGCATGAGCTTACTGCTTATGGAAATGTCAAGCCTCTAAATGGCAGCTATTTTGCTTCAGCCACTGGACGGGTCCACAATTGGAACGGTATCCAGCAAGATATCACTGGCAGGGTACAGAGAAAAGTTCTTTATGAGATAAGTTCTGCTGTCCGCATATTTGGGAGTGCCAATGATACAGAAGTCCGCGTTACTCTGTGGGTACAAGAATATGGCCGTGAGCGATATGTAAGCCTTGCAAAGAACCCGGCATCTGATAAGCAATGGACACATCTAAAAGGAAAGTTCCTCCTCCATGCCCCGTTTTCAAAAGCTGTTATTTTTGTAGAGGGGCCACCTGCAGGCATTGATATTCTTGTTGATGGCCTTGTCCTATCTCCAGCAAGAAAACTCCATGCTGCACCCCGCCCAAGAATTGAGAATGTTTCATATGGAGCTAATGTAATACATAACAGTGCTTTCAGTCATGGGCTTTCTGGGTGGAGTCCCATGGGGTCATGTCGATTGAGTATCCATACTGAATCACCCCATATGCTTTCTGCCATCTTGAAGGACCCCTCAGCTAAGCAACATATAAGAGGTTCTTATATTCTTGCCACAAACCGCACTGATGTGTGGATGGGCCCTTCTCAGTTGATAACTGACAAGCTTAGGCTGCACACCACTTACAGAGTTTCTGCTTGGGTACGTGCTGGGTCTGGAGGACATGGACGTTACCATGTAAATGTTTGTCTTGCTGTAGATCACCAGTGGGTTAATGGTGGGCAAGTAGAAGCTGATGGCGATCAATGGTATGAACTCAAAGGAGCATTCAAGCTTGAAAAGAAGCCATCCAAAGTTACTGCATATGTTCAGGGACCGCCTCCAGGTGTTGATCTCAGAGTTATGGGGTTCCAAATTTATGCTGTTGATAGAAAAGCACGTTTTGAATATCTGAAGGAGAAAACTGACAAGGTAAGGAAGCGTGATGTCATCCTGAAGTTCCAGGGATCAGATGCTGCAAACCTTTTTGGTTCATCTATCAAGATACAACAGACCGAGAACAGTTTTCCATTTGGATCATGCATAGGGAGAAGTAACATTGAGAATGAGGATCTTGCTGATTTCTTCGTGAAGAACTTTAATTGGGCTGTATTTGAAAATGAACTGAAGTGGTACTGGACAGAGGCTGAACAAGGGAGACTAAATTATAAAGATTCTGATGAGTTGCTTGAATTTTGCCGGAAACATAACATTCAAGTTCGTGGTCACTGCTTATTCTGGGAAGTAGAAGATTCAGTCCAGCCATGGATTCGATCATTACATGGTCACCACCTGATGGCTGCTATACAGAATCGTTTGCAAAGTCTGTTGTCAAGGTACAAAGGTCAGTTTAAACATCATGATGTAAACAACGAGATGCTTCATGGGTCTTTCTACCAAGATAGACTGGGAAATGATATTAGAGCTCACATGTTTAGGGAAGCACATAAACTTGACCCTTCAGCAGTACTCTTTGTTAACGACTACAATGTTGAAGATCGATGCGACTCAAAATCTACACCAGAAAAATTAATTGAACAGATTGTTGATCTCCAAGAAAGGGGTGCTCCAGTTGGTGGGATTGGCTTGCAAGGCCATATCACGCATCCAGTGGGTGACATCATCTGCGATTCCCTGGACAAGCTCTCCATACTGGGTCTCCCTATCTGGATCACCGAATTGGATGTCACGGCTGAGAATGAACACATCCGAGCCGATGATCTGGAGGTGTACCTTCGCGAAGCCTTTGCGCATCCTTCCGTGGAGGGGATTATCCTTTGGGGATTCTGGGAGCTGTTCATGTTCCGAGAACACGCTCACCTGGTTGATGTTGATGGAACGATCAATGAGGCTGGCAAAAGGTACATTGCACTGAAGCAAGAGTGGCTAACCAGCATTACTGGCAACGTGGATCACCATGGACAGTTGAAGTTCAGAGGCTACCATGGGTCATACACGGTAGAAGTAGCAACGCCTTCAGGAAAGGTAACCAGATCGTTTGTTGTTGACAAGGATAACGCTGTTCAGGTGGTTACCCTGAACATTTAG</cdnaseq>

Protein Sequence

<aaseq>MTWTSNAEIYLSYNVEQEVEEHGASDKVVMENILSNNDFSEGLHLWHPNGCHGFVAVEGSGYHHGIRPHSGSNYAVLTRRTHNWQGLEQDITEKVTVGTEYIVAAHVRVHGELNEPVGIQATLKLEGDGSSTNYQSVARISASKDCWEKLEGSFELKTLPRRLVFYIEGPPPGVDLLIDSVTISYKKTERAASKLVSGTENIISNYDFSEGLHLWNPICCHAYVASQWSGFLDGIRGSSGENYAVVSKRTESWQGLEQDITDKVSAGTAYAVSAYVRVDGNIHTKVEVKATLRLHNTDDSTHYSPVGSLLASKEKWEKMEGSFCLTNMPKRVVFYLEGPPAGVDLIIDSVNITCSGYQQLKEVKVPSGVDTIVKNPHFDEGLNNWSGRGCNICRHELTAYGNVKPLNGSYFASATGRVHNWNGIQQDITGRVQRKVLYEISSAVRIFGSANDTEVRVTLWVQEYGRERYVSLAKNPASDKQWTHLKGKFLLHAPFSKAVIFVEGPPAGIDILVDGLVLSPARKLHAAPRPRIENVSYGANVIHNSAFSHGLSGWSPMGSCRLSIHTESPHMLSAILKDPSAKQHIRGSYILATNRTDVWMGPSQLITDKLRLHTTYRVSAWVRAGSGGHGRYHVNVCLAVDHQWVNGGQVEADGDQWYELKGAFKLEKKPSKVTAYVQGPPPGVDLRVMGFQIYAVDRKARFEYLKEKTDKVRKRDVILKFQGSDAANLFGSSIKIQQTENSFPFGSCIGRSNIENEDLADFFVKNFNWAVFENELKWYWTEAEQGRLNYKDSDELLEFCRKHNIQVRGHCLFWEVEDSVQPWIRSLHGHHLMAAIQNRLQSLLSRYKGQFKHHDVNNEMLHGSFYQDRLGNDIRAHMFREAHKLDPSAVLFVNDYNVEDRCDSKSTPEKLIEQIVDLQERGAPVGGIGLQGHITHPVGDIICDSLDKLSILGLPIWITELDVTAENEHIRADDLEVYLREAFAHPSVEGIILWGFWELFMFREHAHLVDVDGTINEAGKRYIALKQEWLTSITGNVDHHGQLKFRGYHGSYTVEVATPSGKVTRSFVVDKDNAVQVVTLNI</aaseq>

Gene Sequence

<dnaseqindica>1..416#492..633#981..1345#1423..1582#1988..2325#2427..2604#2743..3276#3465..4580#ATGACATGGACTAGCAATGCAGAAATTTATTTATCATACAATGTTGAGCAGGAAGTAGAGGAGCACGGCGCTTCCGATAAAGTTGTCATGGAGAACATTCTGTCAAACAATGATTTTTCGGAAGGTCTACATTTGTGGCATCCTAATGGTTGCCATGGATTTGTGGCTGTTGAAGGATCAGGTTATCATCATGGAATAAGGCCTCACTCAGGGTCAAATTATGCCGTACTTACTCGTCGCACACATAATTGGCAAGGGCTTGAGCAGGACATAACAGAAAAGGTCACTGTTGGTACTGAGTACATTGTTGCTGCCCATGTCAGAGTCCATGGTGAACTCAATGAGCCTGTTGGAATTCAGGCCACTCTAAAACTTGAGGGCGATGGTTCTTCTACGAACTATCAATCAGTTGCAAGGTATTTTAACTGGAAGGTGATTTTATAGAATATTATACACCATCATGGATTTATCAGTTGAAGTTGTTTTACCAGGATCTCAGCATCAAAAGACTGTTGGGAGAAGTTGGAAGGTTCATTTGAACTAAAAACTCTACCAAGACGTTTGGTATTCTACATTGAAGGCCCCCCTCCTGGTGTAGACTTGCTCATAGATTCAGTCACCATCTCCTACAAGGTATGCTTTTAAATCTCTTTGCTTATGTTCATGTCAGAGCAATCTTGTGATATAAGAATCATGCTCTAAAAGTCTGATTTAATGCTGTCTTAATATGTCCACACCATATTTCTCAGTAGTCATAGCAAAGAAGAGGAAAAATCATACACTAAGACTAATTGTGATCATGATATATTTTTCTTAACATGCCAGTACATACTACTACAGTTTTTGCTATGCGTAGTTGAGACATGTCATGTTTTTTTCCCCATCAAGCTATCAGTGGTGCTTAAAGGTTGACATTGTATTATTCGATTGGATTTGTTACTCTAAGCTACCATTTTCTAACTACTTCAGAGTTTCTGTAGAAAACAGAGCGGGCTGCATCCAAACTGGTTAGTGGAACAGAAAACATCATTTCAAATTATGATTTTTCGGAAGGCCTTCATTTGTGGAACCCTATCTGCTGTCATGCATATGTGGCATCTCAATGGTCTGGTTTCCTTGATGGTATTAGAGGGAGCTCAGGAGAAAATTATGCTGTAGTTTCGAAGAGAACTGAAAGCTGGCAAGGTCTTGAACAAGATATTACAGATAAAGTATCTGCTGGTACTGCTTATGCAGTATCAGCCTATGTTAGAGTTGATGGGAATATCCATACGAAAGTTGAAGTTAAAGCAACCTTGAGGTTGCATAACACAGATGATTCAACACACTACAGTCCAGTTGGAAGGTACATTTCATAAAAGTTGTTCAACGATCAAATTTTTTCTCACCTCTCCTCTAATTTTTCCCTTCTTGATTTAATAGCCTGTTAGCTTCAAAAGAAAAGTGGGAGAAGATGGAAGGATCCTTTTGCTTGACAAATATGCCAAAACGTGTAGTATTCTACCTGGAAGGACCTCCTGCTGGCGTGGACCTTATCATTGATTCCGTAAATATAACTTGCTCTGGATATCAGCAGTTAAAAGTGAGTGCTTTTCCACCAGCATTTGCTTTAACCTTTTTCTAAGAAACGTTATTAACTTTTTCTTCATGTGAATCTTGGCGTGATACATGTTTCTCGGAAGTATAATTAGGAGGCTGAGCAACTAGCTTGAATTTACTGATTATTGAATGTAGAGTGCTAAAATTCTTCTTAGCCAAAATTTATGTTTTGAACCATTTGTATTTTTCTGACCTAATGTATTCCCAAATAGGTTTTTTAGTGCAAAGGGGTAACACATAGTTGATTTTTTTTACAAATTTAAATATGTCTGCTTCTACCTTCAGTGGATTTATCTCATCATATGTTCATTCATGCTTTTCCTGCTATATAATACAAACATTGCCTTTTTAGCCTATGCTTATTACTTCTTAATCTTTCTTTCCAAAGGAAGTAAAAGTACCAAGTGGAGTTGATACCATCGTTAAGAATCCTCACTTTGACGAAGGGTTAAACAATTGGTCTGGAAGAGGATGCAATATCTGTAGGCATGAGCTTACTGCTTATGGAAATGTCAAGCCTCTAAATGGCAGCTATTTTGCTTCAGCCACTGGACGGGTCCACAATTGGAACGGTATCCAGCAAGATATCACTGGCAGGGTACAGAGAAAAGTTCTTTATGAGATAAGTTCTGCTGTCCGCATATTTGGGAGTGCCAATGATACAGAAGTCCGCGTTACTCTGTGGGTACAAGAATATGGCCGTGAGCGATATGTAAGCCTTGCAAAGTAAGTATATGCTTATTTCATTGGTTACACTTTCTGTGACAAGTGGCAGCGTTATTTTTGTAAACATAGACTGGTTTACTAACATATTCTTGTATACAAAGGAACCCGGCATCTGATAAGCAATGGACACATCTAAAAGGAAAGTTCCTCCTCCATGCCCCGTTTTCAAAAGCTGTTATTTTTGTAGAGGGGCCACCTGCAGGCATTGATATTCTTGTTGATGGCCTTGTCCTATCTCCAGCAAGAAAACTCCATGCTGCACCCCGCCCAAGAATTGAGGTTTAAACTAATTCCTTCTGACTAACATTCTTATTTAAATGATCTTGATACATGTTTAGAAGTTTATCAAATCATGATGATGGACAGTGAAATTTTGAACACCAATTCTGAATCAAGGATAATTTCTTTATACTGCAGAATGTTTCATATGGAGCTAATGTAATACATAACAGTGCTTTCAGTCATGGGCTTTCTGGGTGGAGTCCCATGGGGTCATGTCGATTGAGTATCCATACTGAATCACCCCATATGCTTTCTGCCATCTTGAAGGACCCCTCAGCTAAGCAACATATAAGAGGTTCTTATATTCTTGCCACAAACCGCACTGATGTGTGGATGGGCCCTTCTCAGTTGATAACTGACAAGCTTAGGCTGCACACCACTTACAGAGTTTCTGCTTGGGTACGTGCTGGGTCTGGAGGACATGGACGTTACCATGTAAATGTTTGTCTTGCTGTAGATCACCAGTGGGTTAATGGTGGGCAAGTAGAAGCTGATGGCGATCAATGGTATGAACTCAAAGGAGCATTCAAGCTTGAAAAGAAGCCATCCAAAGTTACTGCATATGTTCAGGGACCGCCTCCAGGTGTTGATCTCAGAGTTATGGGGTTCCAAATTTATGCTGTTGATAGAAAAGCACGTTTTGAATATCTGAAGGAGAAAACTGACAAGGTAAACTTTCCTTACTTCTTTTGTATGTTAAGATGATAAATTTATGTCTGCAGAAGCTTGAAAAGAATCTTTATTTTCTTCATGGCAATTTTAGACCAAAATTTTATTCTATAAAGTATCCATTGCTTTGCTTATAATAGTGATTGTGGGCAACATTGAAGTTACATTTCCTTCTTTTTCCCAAATAGGTAAGGAAGCGTGATGTCATCCTGAAGTTCCAGGGATCAGATGCTGCAAACCTTTTTGGTTCATCTATCAAGATACAACAGACCGAGAACAGTTTTCCATTTGGATCATGCATAGGGAGAAGTAACATTGAGAATGAGGATCTTGCTGATTTCTTCGTGAAGAACTTTAATTGGGCTGTATTTGAAAATGAACTGAAGTGGTACTGGACAGAGGCTGAACAAGGGAGACTAAATTATAAAGATTCTGATGAGTTGCTTGAATTTTGCCGGAAACATAACATTCAAGTTCGTGGTCACTGCTTATTCTGGGAAGTAGAAGATTCAGTCCAGCCATGGATTCGATCATTACATGGTCACCACCTGATGGCTGCTATACAGAATCGTTTGCAAAGTCTGTTGTCAAGGTACAAAGGTCAGTTTAAACATCATGATGTAAACAACGAGATGCTTCATGGGTCTTTCTACCAAGATAGACTGGGAAATGATATTAGAGCTCACATGTTTAGGGAAGCACATAAACTTGACCCTTCAGCAGTACTCTTTGTTAACGACTACAATGTTGAAGATCGATGCGACTCAAAATCTACACCAGAAAAATTAATTGAACAGATTGTTGATCTCCAAGAAAGGGGTGCTCCAGTTGGTGGGATTGGCTTGCAAGGCCATATCACGCATCCAGTGGGTGACATCATCTGCGATTCCCTGGACAAGCTCTCCATACTGGGTCTCCCTATCTGGATCACCGAATTGGATGTCACGGCTGAGAATGAACACATCCGAGCCGATGATCTGGAGGTGTACCTTCGCGAAGCCTTTGCGCATCCTTCCGTGGAGGGGATTATCCTTTGGGGATTCTGGGAGCTGTTCATGTTCCGAGAACACGCTCACCTGGTTGATGTTGATGGAACGATCAATGAGGCTGGCAAAAGGTACATTGCACTGAAGCAAGAGTGGCTAACCAGCATTACTGGCAACGTGGATCACCATGGACAGTTGAAGTTCAGAGGCTACCATGGGTCATACACGGTAGAAGTAGCAACGCCTTCAGGAAAGGTAACCAGATCGTTTGTTGTTGACAAGGATAACGCTGTTCAGGTGGTTACCCTGAACATTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025635