BGIOSGA025667

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Revision as of 06:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025667| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025667, complete gene.| tag = OJ1103_...")
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Gene Name

BGIOSGA025667

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025667, complete gene.

LocusTag

OJ1103_E04.109

Ensembl Transcript ID

BGIOSGA025667-TA

Ensembl Protein ID

BGIOSGA025667-PA

Length

4433

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15248024..15252456

Sequence Coding Region

15248024..15248313,15248903..15249098,15249183..15250516,15250799..15250971,15251151..15251397
,15251493..15251787,15252310..15252456

Genome Context

<gbrowseImage1> name=IndicaChromosome07:15248024..15252456 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:15248024..15252456 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGTCGCTCCGCCGCGTCCTCCTCCAGCTCGTGCTCCTCGCCGGCGTCGCCTTCCGCGGGGTCCGCTTCGACGACGCCGCCGACGCCGCCGCCGCCGCCCAGGGGTCGTCAGACCTCTTCGAGCTCCCTTCGCCGTCCCCGACTCTCGCGCTCCCCGGCGGCGGGGATGAGGGGGCCTCGACGGAGATCATCGCCGCGCCGTGGCCGGGGCGCCACGGCCTGTTCACGCCGCCGCGGAGCACGTCCCAGCCGGCGAGAGCGGTGGTCCAGCCGGCCGCCGACTTCGGCTCCCAACTCCAGTTTTACGACAATGGTACAATTCAACTAGTGGACCTTCTATCAAAATTGCCTCGGTGGCAGTTCTCCACCGGACCCCCTCTTTCGAAGCATATCACTACTTCGAAACCTGATTTGAACTATGTCATATACCTTGATGGGTCAGAAACATCGGACCTTATAGAAGTTCATAATGGCAGTGGTGTGAGACTTCCCTGGAAACTGGAGGAGTTTATTGCTGAGACTCCATATATACGGGATTCTTTTGTTACGATTGGATCAAAGGTTTCAACTACTTTTGTGGTCAATGCTGATAGCGGTGAGATCATTTACAAGCATAGCTTGCCAGTGGCCTTGAACGAGGTAGGTGGCCCCCTGGTTGAGGAAATTCCATCCAAGTTAGATGCTGCTAGAAGTGGTACAAGTGCTAATATCATAGTGGTTGTGAGAACTGATTATTCTATCAGTGCATCGGATCTTGGGGAACATTTGTTCAACTGGACAAGAACTTCCTTCACTGCAAATTACTATGCGAGGTATGGCCACCAAGACATGCTTGCCCAATCGTCCTGTCTGCGAGGAAATATTCCATGCATTAGGACTGAGGGTCCACCAATTAAACTTTATTTACCTGATTCAAGTTCAGATAATGCAATTGTCTTGAGACCTGTGAACGAAGTTTCTGCTGTGGATGCTCTGGAACCACTTCTACCTCCAAAGAAGTTACCACAACCTGCTGGCGAGTCTAATGTGGCCTTGGATAGTGCTCAAAACCAGACTGCTGACATTGCCCTAGGTCATTTTGTGCCTGCTGACACTGAATTGACCAACAGTGTCACTAAATTTTCTTACAGATGGCTATTCCCCACGTTTCTCATGTTGTTGATCATGGCTTGTCTAGTGAAATTGGCCGATGCAAGCAAATATTGCAGGCAATTTGTGATTCGATTTTTGAAGCCATTTATGCGTGATGAGAAATTGATGGACCCAAGAGGCAAATCAGAGGGAACATCAAAAAGAAGGAAGGCGCGGAAGAAAGATGGACTTATCAATAGCACTCAGATCTTTTCAGCATCTGATAAAGAGGGGAATGGAACTGGTGGATCAACTGAGGCACAAAGTAATAAAGCACATGATTCAACAAATGTGGAACTCCCTAATGGCCTCAATGGGCGTCAGATTGGTAAGCTTTGTGTTTACAGTAAAGAAATTGGTAAAGGGAGCAATGGTACAGTTGTCTTTGAAGGCTCCTATGGTGGTCGGGAAGTTGCTGTGAAACGTCTGCTGCGCTCTCACAATGATATAGCCTCGAAAGAGATTGAGAATCTGATTGCATCTGATCAGGATCCTAATATTGTTCGAATGTATGGTTTTGAGCAGGACAATGATTTTGTTTATATCTCCCTTGAGAGGTGTCGCTGCAGCTTGGCTGATCTAATCCAACTGCACTCGGTACCACCATTTTCAAATACTAAGGGAACAGACATTGAACTTTGGAGGCAGGATGGACTTCCTTCGGCACAACTTCTAAAGCTGATGAGAGATGTTGTTGCTGGTATTGTGCATTTGCATAGTTTGGGAATTATACATCGTGATTTGAAGCCTCAGAATGTTTTGATAAGCAAGGAAGGACCTCTCAGAGCAAAACTTTCAGATATGGGTATCAGTAAGCGTTTGCAGGAGGATATGACTTCTGTTAGTCATCATGGCACTGGATTTGGAAGCTCTGGTTGGCAAGCACCTGAACAGCTTTGTCATGGTCGTCAGACTCGAGCCATAGATTTATTTAGTTTGGGCTGCCTTATATTCTATTGCATTACTAAAGGCAAGCATCCGTTTGGTGAGTACTATGAACGGGACATGAAAATCATAAACAATCAATTTGATCTCTTCATACTGGATCACATACCAGAAGCAGTGCATCTTATTTCTCAACTGTTAGATCCAGATCCAGAGAAGAGACCAACGGCCGTGTATGTGATGCATCATCCTTTCTTTTGGAGCCCTGAGTTGTGCCTTTCATTTCTACGAGATACCAGTGACAGAATTGAGAAAACCAGTGAAACTGATCTCATAGATGCTTTGGAAGGCATAAATGTTGAAGCATTTGGTAAAAATTGGGGAGAGAAATTAGATGCTGCCCTGCTTGCAGACATGGGACGTTATAGAAAATATAGTTTTGAGTCCACTCGTGACCTTCTAAGATTGATCAGAAACAAATCAGGACATTACAGAGAATTTTCAGATGATCTCAAGGAGCTACTTGGGTCGCTGCCGGAGGGATTTGTTCAGTATTTCTCAAGCCGATTCCCAAAGCTGCTAATTAAAGTCTACGAGGTCATGTCCGAGCATTGCAAGGACGAAGAAGCTTTCAGCAAATATTTCCTTGGAAGCTCGGCGTAG</cdnaseq>

Protein Sequence

<aaseq>MRSLRRVLLQLVLLAGVAFRGVRFDDAADAAAAAQGSSDLFELPSPSPTLALPGGGDEGASTEIIAAPWPGRHGLFTPPRSTSQPARAVVQPAADFGSQLQFYDNGTIQLVDLLSKLPRWQFSTGPPLSKHITTSKPDLNYVIYLDGSETSDLIEVHNGSGVRLPWKLEEFIAETPYIRDSFVTIGSKVSTTFVVNADSGEIIYKHSLPVALNEVGGPLVEEIPSKLDAARSGTSANIIVVVRTDYSISASDLGEHLFNWTRTSFTANYYARYGHQDMLAQSSCLRGNIPCIRTEGPPIKLYLPDSSSDNAIVLRPVNEVSAVDALEPLLPPKKLPQPAGESNVALDSAQNQTADIALGHFVPADTELTNSVTKFSYRWLFPTFLMLLIMACLVKLADASKYCRQFVIRFLKPFMRDEKLMDPRGKSEGTSKRRKARKKDGLINSTQIFSASDKEGNGTGGSTEAQSNKAHDSTNVELPNGLNGRQIGKLCVYSKEIGKGSNGTVVFEGSYGGREVAVKRLLRSHNDIASKEIENLIASDQDPNIVRMYGFEQDNDFVYISLERCRCSLADLIQLHSVPPFSNTKGTDIELWRQDGLPSAQLLKLMRDVVAGIVHLHSLGIIHRDLKPQNVLISKEGPLRAKLSDMGISKRLQEDMTSVSHHGTGFGSSGWQAPEQLCHGRQTRAIDLFSLGCLIFYCITKGKHPFGEYYERDMKIINNQFDLFILDHIPEAVHLISQLLDPDPEKRPTAVYVMHHPFFWSPELCLSFLRDTSDRIEKTSETDLIDALEGINVEAFGKNWGEKLDAALLADMGRYRKYSFESTRDLLRLIRNKSGHYREFSDDLKELLGSLPEGFVQYFSSRFPKLLIKVYEVMSEHCKDEEAFSKYFLGSSA</aaseq>

Gene Sequence

<dnaseqindica>1..290#880..1075#1160..2493#2776..2948#3128..3374#3470..3764#4287..4433#ATGAGGTCGCTCCGCCGCGTCCTCCTCCAGCTCGTGCTCCTCGCCGGCGTCGCCTTCCGCGGGGTCCGCTTCGACGACGCCGCCGACGCCGCCGCCGCCGCCCAGGGGTCGTCAGACCTCTTCGAGCTCCCTTCGCCGTCCCCGACTCTCGCGCTCCCCGGCGGCGGGGATGAGGGGGCCTCGACGGAGATCATCGCCGCGCCGTGGCCGGGGCGCCACGGCCTGTTCACGCCGCCGCGGAGCACGTCCCAGCCGGCGAGAGCGGTGGTCCAGCCGGCCGCCGACTTCGGGTGAGCTTCTTGGTCCCCCTCCCTCCGTCTTCTTCCAGTTGCGATGCTGTTCAGGAGGAGGCTATGGAGTCTATAGGAGGTGGATCGATTGGCTTGTGCAGCGGGACAGGGTTGGGGGGGGGGGGCTTTGCCTCCTGTTCTTATCCTTGGCTTTTGGAGGAGCGAAATGGATTCCCATCCCGCCAAGTGTTAAAGAGGGTTTCTTGTAGTTAGGGAGGCTTGCTAGGTTCCTTTGTCACTTTCTTGCTTTCGTGCTGCAATGGAGTGGGGAAATGCGGGGAAAAGAGAGCTCTCTAGCTGCTTAGGTCATGCATGATCCATGGTTGGAACAGCATCTTCTTGCTGCTTTGGTAGTTCTCACTAGCATTAGTAATGACATGACTTTGCTTGATTGCATTGCACTTCAATTTTAGTATTAGTTACGAATTAATTTATGGAAATGAGCAGCTTTTGCACTTACTATTCCTAGTATAAGAGGTGCTACTTATGATTCAAATTGAGCTGTTTGGTTCATTTCTTATGTGTGTACTTTCCATTTTGTCCCGCCATTTGAAATTGCAACTTATTTGCTTGTTTTTATTGTGAACAGCTCCCAACTCCAGTTTTACGACAATGGTACAATTCAACTAGTGGACCTTCTATCAAAATTGCCTCGGTGGCAGTTCTCCACCGGACCCCCTCTTTCGAAGCATATCACTACTTCGAAACCTGATTTGAACTATGTCATATACCTTGATGGGTCAGAAACATCGGACCTTATAGAAGTTCATAATGGCAGTGGTGTGGTATGCTTTGCACAATTGCGTTAGTTCTCAACATCCTGTCTAGTTTTGCTTTGTTTCTCACCTATCACTGGCTTATTCCTGTAGAGACTTCCCTGGAAACTGGAGGAGTTTATTGCTGAGACTCCATATATACGGGATTCTTTTGTTACGATTGGATCAAAGGTTTCAACTACTTTTGTGGTCAATGCTGATAGCGGTGAGATCATTTACAAGCATAGCTTGCCAGTGGCCTTGAACGAGGTAGGTGGCCCCCTGGTTGAGGAAATTCCATCCAAGTTAGATGCTGCTAGAAGTGGTACAAGTGCTAATATCATAGTGGTTGTGAGAACTGATTATTCTATCAGTGCATCGGATCTTGGGGAACATTTGTTCAACTGGACAAGAACTTCCTTCACTGCAAATTACTATGCGAGGTATGGCCACCAAGACATGCTTGCCCAATCGTCCTGTCTGCGAGGAAATATTCCATGCATTAGGACTGAGGGTCCACCAATTAAACTTTATTTACCTGATTCAAGTTCAGATAATGCAATTGTCTTGAGACCTGTGAACGAAGTTTCTGCTGTGGATGCTCTGGAACCACTTCTACCTCCAAAGAAGTTACCACAACCTGCTGGCGAGTCTAATGTGGCCTTGGATAGTGCTCAAAACCAGACTGCTGACATTGCCCTAGGTCATTTTGTGCCTGCTGACACTGAATTGACCAACAGTGTCACTAAATTTTCTTACAGATGGCTATTCCCCACGTTTCTCATGTTGTTGATCATGGCTTGTCTAGTGAAATTGGCCGATGCAAGCAAATATTGCAGGCAATTTGTGATTCGATTTTTGAAGCCATTTATGCGTGATGAGAAATTGATGGACCCAAGAGGCAAATCAGAGGGAACATCAAAAAGAAGGAAGGCGCGGAAGAAAGATGGACTTATCAATAGCACTCAGATCTTTTCAGCATCTGATAAAGAGGGGAATGGAACTGGTGGATCAACTGAGGCACAAAGTAATAAAGCACATGATTCAACAAATGTGGAACTCCCTAATGGCCTCAATGGGCGTCAGATTGGTAAGCTTTGTGTTTACAGTAAAGAAATTGGTAAAGGGAGCAATGGTACAGTTGTCTTTGAAGGCTCCTATGGTGGTCGGGAAGTTGCTGTGAAACGTCTGCTGCGCTCTCACAATGATATAGCCTCGAAAGAGATTGAGAATCTGATTGCATCTGATCAGGATCCTAATATTGTTCGAATGTATGGTTTTGAGCAGGACAATGATTTTGTTTATATCTCCCTTGAGAGGTGTCGCTGCAGCTTGGCTGATCTAATCCAACTGCACTCGGTACCACCATTTTCAAATACTAAGGGAACAGACATTGAACTTTGGAGGCAGGATGGACTTCCTTCGGCACAACTTCTAAAGCTGATGAGGTATGTGACAACTGGTCACTGGTGCCCTTTAATGTTGCACACCATGTCTATCAGTATATGCATGTGTTGTTTACTTTGAGATTAATTGACTAAGGTCACGCTTATGCATAGCTTAACTTGATGCCCTTTTGCTAAGAACACTTTGCCAACAACCAACATCCACCATTTGCTATTACAAAGTTCCTTAATGGCTGATATTATTTGCCTGCCTATTCTTGGTATTGTTGCTAGCGTGTCCACCAGACCACCACTGATGTTGCCCTTGTGAATTTTCATGTGCAGAGATGTTGTTGCTGGTATTGTGCATTTGCATAGTTTGGGAATTATACATCGTGATTTGAAGCCTCAGAATGTTTTGATAAGCAAGGAAGGACCTCTCAGAGCAAAACTTTCAGATATGGGTATCAGTAAGCGTTTGCAGGAGGATATGACTTCTGTTAGTCATCATGGCACTGGTAAGGTTCAAAGTTGCTTGCGAATATGCAATATGAGAAATTACTTTCTGTATCTTTTTTATGGTCAAGGTCAACTTTCTTAAGTGCATTTTTTAGTCATTGCGATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTAACTAGCCATTTCATCCCTGTCAACTTACTGCAGGATTTGGAAGCTCTGGTTGGCAAGCACCTGAACAGCTTTGTCATGGTCGTCAGACTCGAGCCATAGATTTATTTAGTTTGGGCTGCCTTATATTCTATTGCATTACTAAAGGCAAGCATCCGTTTGGTGAGTACTATGAACGGGACATGAAAATCATAAACAATCAATTTGATCTCTTCATACTGGATCACATACCAGAAGCAGTGCATCTTATTTCTCAACTGTTAGATCCAGATCCAGAGAAGAGGTAAGAATAATTTGGTATTTTGACATCGTTAATGCCCTGAACATTTAAAAAGGCTTCCTGATTTTCTGAATGCATTTTTTTATTAATGTTAACAGACCAACGGCCGTGTATGTGATGCATCATCCTTTCTTTTGGAGCCCTGAGTTGTGCCTTTCATTTCTACGAGATACCAGTGACAGAATTGAGAAAACCAGTGAAACTGATCTCATAGATGCTTTGGAAGGCATAAATGTTGAAGCATTTGGTAAAAATTGGGGAGAGAAATTAGATGCTGCCCTGCTTGCAGACATGGGACGTTATAGAAAATATAGTTTTGAGTCCACTCGTGACCTTCTAAGATTGATCAGAAACAAATCAGGACATTACAGAGAATTTTCAGATGATCTCAAGGTCTGTTGCTGCATTTCTTGTTTTGTTTGCTTTGTTTTAGTTTTCCTGCATACAGCTAAACTATGGGTCAAACAAGAGGTGGTGCTGTAGTATGCATGAATGCTGTTGTGTGTTCAATGGATGTTCATATTAGTTGCTGTGCATGAATGTAGTATATAGGAAAAGTAGTTAGTTGCAGTCATGAATGTTATATTAGTTGCTTCTGTATTATCTTAGATAGTTTCTTAGTTTACTTCTTTTATGTAAGGTTCAACTAAACTATGTAGTGTGCTAGTTTGTGATGATTTTGATTCTACAGTCTTATCTTCCTCACAAGGGTGGGCACTACTGCTGACCTCCTCCTAGGAGTTAGGATATATCTCTGCCTTTTCGGTTTTCTGGAGAATATTAAAAGTTTGAGATACTATTTTATACATTTTCAGTTTTCTGAAGAATATTATCAAGTTTGAGATACTACTTACAGATTGTGACCATGCAATCATCATCCCAGACGCTAACATATTCATGTTAATAAAATTCCAGGAGCTACTTGGGTCGCTGCCGGAGGGATTTGTTCAGTATTTCTCAAGCCGATTCCCAAAGCTGCTAATTAAAGTCTACGAGGTCATGTCCGAGCATTGCAAGGACGAAGAAGCTTTCAGCAAATATTTCCTTGGAAGCTCGGCGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025667