BGIOSGA025698

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Revision as of 06:32, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025698| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025698, complete gene.| tag = OsI_260...")
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Gene Name

BGIOSGA025698

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025698, complete gene.

LocusTag

OsI_26003

Ensembl Transcript ID

BGIOSGA025698-TA

Ensembl Protein ID

BGIOSGA025698-PA

Length

7007

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:15941968..15948974

Sequence Coding Region

15941968..15942859,15945228..15945748,15946835..15947059,15948234..15948974

Genome Context

<gbrowseImage1> name=IndicaChromosome07:15941968..15948974 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:15941968..15948974 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGTCGTCGGAGGCGTCGTCGTCGCCGCCGCTTACGAAACCGATAATGCACGCCCACGGCCAGGAGTAGATCCCCAGCTGCTGATGGCTGCTCGTCGCGGCGACAGCAAGCTGCTCGAGGAGAAGCTCGTGGGGCTCAACGACGATAGGGTGGAGGCGGCGGCATCAGAGGAGGCAGTAGTCGTCGTGGACGTCGTCGTCGTGGACGTCGTCCCGCCTCCTCCCCGGCGTACTCCTCCTCCTCCTCCTCCTCCTGCTGCGGCTGATGTTATACCGGCCTCCTCCTCCTCGCTCCCGGCGGCGCCGCCACCGCCGCTTGATGGGGTGACAGCCGAGGGGGACACCCTTCTGCACGTGGTGGCGGAGTGCGGCGACGGCTTGGAGTTCCGCCGCTGCGCCAGGCTGATCTACGACACGGAGAAGCGCCTCCTGGACGCGCGCAACGGCAGGGGCGACACGCCCCTGCACTGCGCCGCGCGCGCCGGGAACGCCGAGATGATCTCCTTCCTCATCGATCTCGCCGCGGCCTCCCGCGACGGGAAGGCGGCGACGGAAGCGGAGAGGAAGGTGGCGTACCTAAGAGTGCACAACAACCGTGGGGAGACCGCATTGCACCATGCGGTCCGTGCGGTTGCTACTGCCGCCGGCAGAAAGGGCGGCCGCATCGAGAAGCAGCTGGACTGCATCGACCGTCTGATAGCCGAGGATGCGGAGCTGGCCGCCATCCCACCCCCGAGTGAGAAGGCTGCTGCTTCCCCATTGTACCTGGCCATCTCACTGGGCGAAATTGGCATTGCAAAGCATCTGTTCGTTATAAGTGAAGGCAATCTATCCTGCTCCGGACCAAATGGACGAAACGTCTTGCATGCAGCTGTTTCTCATGACCAAGCACTGCAGGCTCTGCCTATGGTTTTGGAATGGCTCCAGAATAAGAAACTGAAGACGGCCGACGTCGACATGCAGCAGCTGACTAGCCAGAGGGATAAGGACAACGGGAGCACCCCTCTTCACTTGGCCGCATCAATGGCTGGGCTGCCGTCCCTAGGGTCGAAGTCGGCAGGGCGATCAGCGACCAGGCTGCTGCTGGATGCCAACGTGTCCACGGCGTACCAGCCGGACAACCAAGGGCGGTACCCCATACACGCTGCTGCGTCGGCTGGCAGCCTGGAGGCCGTGAAGGCCCTGCTCCAGAAATGCCCAGACTGTGCTACCCTGCGAGATGCGAGAGGAAGAACTTTCCTCCATGCTGCCGTTGAGAATGAGAGACTTGAAGTGGTTGGCTATGTCCGCACTGCGCCAGGGTTGTCATCGATCCTAAATCTGCAGGACGACAATGGGGACACCGCGCTGCATAGCGCTGTCCGTACTAAATGTTTTCAGGCCGTCCTATGTCTCCTTAAACATCCACAGCCAGCGTCGCACGATGGAATCTATTCGCAGCCGGCGAGGCGAGGCGAGGTTGGGGACATGGTAGGTCCGGCAGCGAGCAGATCTGGCGCCCATGACGAGTGCGAGCATGGCCCCGTCGTCCCCGATCGGCAGGAGCGAGGAGAGAGGGAGGACAACGCTGGCAGTTGTGAGGAGAAAGGGGGAAGAAGGGGGACCGGTGCGCCGCTTGTCGTCGACGTCGGACCGGATCCAAGAATAAAAATACAAAACTTACTCTGGATACTGAGGGCTCCATTTGGTGAAAGTCGGGGCGACCTCTTCGATGAAAAACATGCCAAAATCGTCGTCGAATCTAAAAGGGACATGGAAAAGATGTCAGAGAATATAACAGCTGCAGCGCAAGTCCTGGCCCTTTTCTCTGTCCTTATTACAACTGTGACATTTGCATCTGCTTTCACTTTGCCCGGAGGATACCGATCAGCTGGCGACTATGGTGGTGCCGCTGGCACGCCAGTGCTTGCTAGGCGTGGGAGCTACGCTTTCGATGCGTTTATCCTCGCCGACGCTCTGGCATTCGTCTGCTCTTTCGTTGCTACGTCCTTTCTGCTCTATGCCGGGGTGCCTGCTTATAAACTTGAAGTCCGCCTTAACAACATTAATTTTGCATACGGCCTGATGATGAACTCTGGAGGATGCTTGGTGGTTGCTCTTGCCTTGGGCTTCTACGTGGTTCTGCTTCCACCAGTTGGCCACACGATTGCGACTGAGATCGGTGTCGTGATGATTATGGTTGCAATAGTTGCATTCACCAAGGATTCGGACGGCAGGGTTAAACCTGCCTTCATAACCGTTCCTGTTATGAGAAACAACTGGAAACCGTCACAAGAGGTTGTGCGAAGCTTCATTACTTATTTCTACGAACGTTATTGGTCCTTCATACTAATATTCGGCCTCCCTGCAATTCACACGTGGGCCAAAGCAAAGTAA</cdnaseq>

Protein Sequence

<aaseq>MAVVGGVVVAAAYETDNARPRPGVDPQLLMAARRGDSKLLEEKLVGLNDDRVEAAASEEAVVVVDVVVVDVVPPPPRRTPPPPPPPAAADVIPASSSSLPAAPPPPLDGVTAEGDTLLHVVAECGDGLEFRRCARLIYDTEKRLLDARNGRGDTPLHCAARAGNAEMISFLIDLAAASRDGKAATEAERKVAYLRVHNNRGETALHHAVRAVATAAGRKGGRIEKQLDCIDRLIAEDAELAAIPPPSEKAAASPLYLAISLGEIGIAKHLFVISEGNLSCSGPNGRNVLHAAVSHDQALQALPMVLEWLQNKKLKTADVDMQQLTSQRDKDNGSTPLHLAASMAGLPSLGSKSAGRSATRLLLDANVSTAYQPDNQGRYPIHAAASAGSLEAVKALLQKCPDCATLRDARGRTFLHAAVENERLEVVGYVRTAPGLSSILNLQDDNGDTALHSAVRTKCFQAVLCLLKHPQPASHDGIYSQPARRGEVGDMVGPAASRSGAHDECEHGPVVPDRQERGEREDNAGSCEEKGGRRGTGAPLVVDVGPDPRIKIQNLLWILRAPFGESRGDLFDEKHAKIVVESKRDMEKMSENITAAAQVLALFSVLITTVTFASAFTLPGGYRSAGDYGGAAGTPVLARRGSYAFDAFILADALAFVCSFVATSFLLYAGVPAYKLEVRLNNINFAYGLMMNSGGCLVVALALGFYVVLLPPVGHTIATEIGVVMIMVAIVAFTKDSDGRVKPAFITVPVMRNNWKPSQEVVRSFITYFYERYWSFILIFGLPAIHTWAKAK</aaseq>

Gene Sequence

<dnaseqindica>1..892#3261..3781#4868..5092#6267..7007#ATGGCCGTCGTCGGAGGCGTCGTCGTCGCCGCCGCTTACGAAACCGATAATGCACGCCCACGGCCAGGAGTAGATCCCCAGCTGCTGATGGCTGCTCGTCGCGGCGACAGCAAGCTGCTCGAGGAGAAGCTCGTGGGGCTCAACGACGATAGGGTGGAGGCGGCGGCATCAGAGGAGGCAGTAGTCGTCGTGGACGTCGTCGTCGTGGACGTCGTCCCGCCTCCTCCCCGGCGTACTCCTCCTCCTCCTCCTCCTCCTGCTGCGGCTGATGTTATACCGGCCTCCTCCTCCTCGCTCCCGGCGGCGCCGCCACCGCCGCTTGATGGGGTGACAGCCGAGGGGGACACCCTTCTGCACGTGGTGGCGGAGTGCGGCGACGGCTTGGAGTTCCGCCGCTGCGCCAGGCTGATCTACGACACGGAGAAGCGCCTCCTGGACGCGCGCAACGGCAGGGGCGACACGCCCCTGCACTGCGCCGCGCGCGCCGGGAACGCCGAGATGATCTCCTTCCTCATCGATCTCGCCGCGGCCTCCCGCGACGGGAAGGCGGCGACGGAAGCGGAGAGGAAGGTGGCGTACCTAAGAGTGCACAACAACCGTGGGGAGACCGCATTGCACCATGCGGTCCGTGCGGTTGCTACTGCCGCCGGCAGAAAGGGCGGCCGCATCGAGAAGCAGCTGGACTGCATCGACCGTCTGATAGCCGAGGATGCGGAGCTGGCCGCCATCCCACCCCCGAGTGAGAAGGCTGCTGCTTCCCCATTGTACCTGGCCATCTCACTGGGCGAAATTGGCATTGCAAAGCATCTGTTCGTTATAAGTGAAGGCAATCTATCCTGCTCCGGACCAAATGGACGAAACGTCTTGCATGCAGCTGTTTCTCATGACCAAGGTAGATAATACTCCTACTCAACTCCTTACAATATCAATCATCCTCTTCCTACATACGGAGTATATGTAGGGGATCAGTACGTACTGTATTATATTTATGGGAGTAATACTTCACTTGCTGCATGCGTTTTATGTTTTCTAAGAAATTAAAGCTCAGCAAATCCTGCTTTTTTTTTAATTGAAAGCAACAGCGACAGCAAAGTGCCTGATAATACTTCAGCCATTTAGGAGTACATGCTCCCCCGGTTTCATAATTTTTGACGTTTGACAATAATATGGTCTACAAAATATATCTTTAACCTTATCTTTTTATTATAATATATACAATAAATAAATGCATGTTTACTTTTATTATAACACTTTTGATACACACATACATACATATGTTGTTCTAGTTCCTTAAATCTAAATAATTTTAAAGTTACTGATAGTCAAAGTTACAAAAGTTTGACTTTAATTTTATCCAAAAAGTCAACAATTATAGAACCGAAGAGGGTTAGAGATTTTGGAGACATGTTTACAGTAATTAAGGTTTCACATAGAAGACTATAATGCCCCCTCTTTAAATGAGGAGTGGTTGGAGGTGGGAGGATAATTTACGGTAAGATCAAAATTAATTTGAATGTGTGAGGTGGTTGATTCAACAAATATTATTATTCCAAAGTCCTTTATATTTATGAATAAATGGAGAGGATCAAAATCCATTGCCCAAATTCCTTTATACCTTGAACGGAGGGGGTATAAATGACCATCATGATATGGAAAAAAGTTTTGTTAATTTGTTTTTTTTCCATCTTTGAAAGTTTGTAAAAATAACAATCAGTAGTTTTGCTAAAAATATGGCGCTATATTTTTGTACTTGATTTCAGTCACTCTTTTCTTATGTGATTGCTATAAGTTTTTTTTCTTATGTATGATTGCCATAAGTATGTTTATAGCTTAGCTTTTAAGAGTGTGTCTATATATATATATATATATATACATATATGTATACATACATATATATATATATATATGTATACATATATATACATACTTATGGCAATAAGTATGTATACATATATACGTGTATACATATATATATATATATATATGTATGTATACATGTATACACATATATATATATACATGTATACACACACACACACACACACACACACACACACACACACACATATATATATATATATATATATATATATATATATATATATATATATATATATATATGTCACACTAGAAAAAATGCCTGTGTGTTACAACGGGTGAAGTCTATTTTAATTTTATTATTGTTATATGGTTTAGTTAAGATGAAATTCTTTGTAAGAGTGGATATATATATATTTAGAAAATCATGAGCTGTAGTTAGGAATCTGACGTCTCAAGTTAGCATGCGAGATTTTTAAACAGATTTCTTATATGATTCCTTCTGTATTACCAAAAGTGAACGATCTTACAAACCGACTCAAATACGGATATGTATTTCCAAAAGCAAACGAACTTAAAAACCAACTCATACACGGATGATGTACCAAAATACTGGCAAAAACATCTTCAATTTTTATAATAATAGAGATAGAGAAGAGATATAGATTAAAACCAAAACATAAAATTAATACCGACTCAAACACGGATGACGAACTGTGGAAACATCTTCAATATATATATATATATATATATATATATATATATATAAAATATGAAAATGCAGATATGCACTTGAGCTCACATGCATCAACAATCTACACCATTGATGTGTTCCAAGATTCGTGCTGCAAAATGTACCTAACCTTGACCAAATGAATTCTTACTATAGAAAGAAAAGATTAGGTTGGTACACAACACATATAATAAGTATGTTGCATTTTTTTACCAAATATTTTTTTTCAATAACAACCATATATGAAATTTGTGCATGGTATTTCTCTAACCCTTATTTTTTTATAACATGATATTTAGTCAACATAAGAAAATGTTACATCTATTATATCACCAAATTATCATCTTGCAAAAATTATATATCCTACCATGTAAAACTACATAAACGAGGTAATTATACAAACAAGATAATTTATATAAACAAGGTAAATTTGATCTGATAATTTGATAACCTCAATGTTTTACATATAAGGAAAAAAATTACATCAACAAGGTATTTTGCACTTGTAAAAAATATTGAATAAAGTAAACATCATATATGGTACATTTTGTTAGTACCTAATGTACCTGCCCTAAGATTCGTGCAACCTATATAGAGGGTACATAGGAGTTGGATTTTTTTTGCACTCGAGCTCACATGCACCCACAATCTACACCCTATATATATGTATCCCTATATATACATCCAACTGTCTGCATGCTTGATGCAGCACTGCAGGCTCTGCCTATGGTTTTGGAATGGCTCCAGAATAAGAAACTGAAGACGGCCGACGTCGACATGCAGCAGCTGACTAGCCAGAGGGATAAGGACAACGGGAGCACCCCTCTTCACTTGGCCGCATCAATGGCTGGGCTGCCGTCCCTAGGGTCGAAGTCGGCAGGGCGATCAGCGACCAGGCTGCTGCTGGATGCCAACGTGTCCACGGCGTACCAGCCGGACAACCAAGGGCGGTACCCCATACACGCTGCTGCGTCGGCTGGCAGCCTGGAGGCCGTGAAGGCCCTGCTCCAGAAATGCCCAGACTGTGCTACCCTGCGAGATGCGAGAGGAAGAACTTTCCTCCATGCTGCCGTTGAGAATGAGAGACTTGAAGTGGTTGGCTATGTCCGCACTGCGCCAGGGTTGTCATCGATCCTAAATCTGCAGGACGACAATGGGGACACCGCGCTGCATAGCGCTGTCCGTACTAAATGTTTTCAGGCCGTCCTATGTCTCCTTAAACATCCACAGGTACGCTTGGATATGCCGAATAAGGAGGGCATGATGCCTGCCGATGTTTCATGGAGCATGATGCCTTTAAAGACTTATTATGCATAGGTAAGTAATAAATACTACTTGGGCCTATCTCCGTTTGTTAATTGACTCATCTTTTTCTGATCTCTATAAATCACTTTTTCCTATAATAGAGCATCTGTTCATATCAAACTGCTCTTACTATAATGTTCTTTTGCTTCTTGTTGTGTGAAACAAACAATTTTCCAATCTTCTAATCTAGATTTGCAAAGAATATATAATTAGTTGTTTATCAACACTGATAAAGATAAATAAATAAATAAATCAATCAATCAACCAATCTATCTATCTATCTATCTATTATTCAAGAGGATATATCCGGTAAAAACGAGACAAGTGTTAGAAACTCGTGAAAATTATATCTAAAAGTGTGTAAATTCATGAAAAAAATTACTAAAGATAGTTAAAGATTTGAAATAAATTCTCACCAAATCTCAAATCCAAAATCAACTTCATTTGAGAGAAAAAAAAAGACAAATTTCAGATGAGTAGTAACAAATTTTTGTTACTCCCAAATGAAGCTGAGTTTGAACATGAGATTTAGTGAGAATGTATTTCATATCTACACCTATCTCTAGTAATTTTTTCATGAATTTGAAAAACAGTAGGCATGATTTTTACAAGTTTCCAACAGTTAGCTCGTTTTCACCGGATATGTCCCCATTATTCAATCAATCTATCTATCCATCTATCTATTGGGAAAGTTTCAGGTGCAACCCACCTACTGAGTGCAAAAATGCAACCCTCAATCTCCATGGTTGTATCTAATATGTGTGGTCTAGAACAAGCCCCTTCTGCCCCACAATGCATTTTGCAAAATAACACTCACCTCCATTGGTGTTTTTGCATTTTAGTCCCTACATTCCTCTCTCTTCCTCCCGGACCTCCCTCTCTCTTCTCGTCCCCTCGCTCATCCTCTCTCTCTCAGTGGTGCATGGCAAGGCAGTGGAAAGGGGCGGGCTGAGGTCAGGAAGCCAATCCCTCCCAATCTTCATCTTCCTCCCCTTTCTATTCTCACTCCAGCCAGCGTCGCACGATGGAATCTATTCGCAGCCGGCGAGGCGAGGCGAGGTTGGGGACATGGTAGGTCCGGCAGCGAGCAGATCTGGCGCCCATGACGAGTGCGAGCATGGCCCCGTCGTCCCCGATCGGCAGGAGCGAGGAGAGAGGGAGGACAACGCTGGCAGTTGTGAGGAGAAAGGGGGAAGAAGGGGGACCGGTGCGCCGCTTGTCGTCGACGTCGGACCGGTTGCTTCCTGCTGTTGTCGTCGCCTCCTTTGCCATGCCTGCTCGCGCTCCTGCTTGTCGTTGCGCCGCCGCACCTCCGCCTCTATCCTCGACATCGCCGCATCTAATCTATCTATGTATCTATCTATCTATCCATCTATCTATCTATCTATCTATCTATCTATCTATATTATTCAGACAACATTAAAAGAAGTAACCACGAAACCACATTCGCTATGGAGTCTTTAAAACCACATTAATTAAAGAACAATAAAAAAATGAGTTTAAGTAGGAACATAATTTAGAACAATTAAAATTTGGAACAAAATTCAGGGGTTTCTGTGACTTTCAAAAGTTATAAAATTGAAAATCTGATGATCATAAGGTTTGATTTTTTTAAAACAAAAAATTCTAAGGAAACGAGATAACTATTTAACAAATGTTTCCAAAAAATCATGCGTACAAAAATGAGATAATTTTGTTTGCATGCTAGTCGCACAATTACGTGGGCCACCTGCTAGTTATGATCATATGAGCATTAAAATTAATGCGTCGGGATTTGTTGAATAGAGTAAAACTCAAGTAGATAATAAGTTGGAACCCATTTGAACTAAAGTTGCACTTTTCTATATTATGTAGGTTTAATTAGTCTACATTTTGTGAACTGATAGTACGTATACATATATTTGAGGTCCTCAATCTTTTAGGAATATTAAAAGCTTTATGCAATTAATACTAGCTAAAGGCCCATACGTAGCAACGAATATTATAAGAGATGAAAATAAAAGTAAAAATTACAAGTTCATAGCATAGTTAGTTGGTTAGGCATATAAATTAAAGACACCATACTGAAGTATGCTGCTAGTTCACTTTTTTTATCATCATGTATTTCTACAAGCAATATGGTTAGATAATACAATATTGGATACTTATAATTCATCTGTGGGTAAAAGGTGAATCTGAAGGTTTTGTATATGTAACACGTTAGAATTTCTATAATTAGGAATTCCACATCCATTCATGTATTGTGGGGACCTTATGCTTATGGCCTCACATGTTAGTTTGTGGTGTTGGAGAGACAGCCTCAGACACCAACTCTAACATTATTTAACGTAGTTATCTAGAATATATTTTCTTTTTTCCACTCATATGGCATGGAAATTTATTTATACACATGTACAATTCTTGCGTGCAGGATCCAAGAATAAAAATACAAAACTTACTCTGGATACTGAGGGCTCCATTTGGTGAAAGTCGGGGCGACCTCTTCGATGAAAAACATGCCAAAATCGTCGTCGAATCTAAAAGGGACATGGAAAAGATGTCAGAGAATATAACAGCTGCAGCGCAAGTCCTGGCCCTTTTCTCTGTCCTTATTACAACTGTGACATTTGCATCTGCTTTCACTTTGCCCGGAGGATACCGATCAGCTGGCGACTATGGTGGTGCCGCTGGCACGCCAGTGCTTGCTAGGCGTGGGAGCTACGCTTTCGATGCGTTTATCCTCGCCGACGCTCTGGCATTCGTCTGCTCTTTCGTTGCTACGTCCTTTCTGCTCTATGCCGGGGTGCCTGCTTATAAACTTGAAGTCCGCCTTAACAACATTAATTTTGCATACGGCCTGATGATGAACTCTGGAGGATGCTTGGTGGTTGCTCTTGCCTTGGGCTTCTACGTGGTTCTGCTTCCACCAGTTGGCCACACGATTGCGACTGAGATCGGTGTCGTGATGATTATGGTTGCAATAGTTGCATTCACCAAGGATTCGGACGGCAGGGTTAAACCTGCCTTCATAACCGTTCCTGTTATGAGAAACAACTGGAAACCGTCACAAGAGGTTGTGCGAAGCTTCATTACTTATTTCTACGAACGTTATTGGTCCTTCATACTAATATTCGGCCTCCCTGCAATTCACACGTGGGCCAAAGCAAAGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025698