BGIOSGA025715

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Revision as of 06:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025715| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025715, complete gene.| tag = P0683C0...")
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Gene Name

BGIOSGA025715

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025715, complete gene.

LocusTag

P0683C09.118

Ensembl Transcript ID

BGIOSGA025715-TA

Ensembl Protein ID

BGIOSGA025715-PA

Length

3506

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16305575..16309080

Sequence Coding Region

16305575..16305635,16306147..16306391,16306910..16306972,16307058..16307076,16307321..16307419
,16307500..16307577,16307666..16307910,16308580..16308736,16308938..16309080

Genome Context

<gbrowseImage1> name=IndicaChromosome07:16305575..16309080 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:16305575..16309080 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCTGGCGGAATCGCCTCAGTGGCGCCAGAAGGCCACGAATTTCTTCTCTTCATCCAGCTTCAAGCTGAAGCAGGCAGGGCAATCAGCAGGGGACAATATAGCTGATGTTGCTGGCAAGGTTGGTTCAGTGGTTAAGAGTCGGTGGGCTGTCTTCCAGGAGGCTAGGCAGCGGCAGCCGCCACCAGGGGAGACTGTGCAAGAGCGTTTCATCTCTGCTGCTGCCACCACTGGGGTGCTTCTGAGGAAGGGCATTTCAGAGACAAAGGAGAAAGTTGCAGTGGGAAAGGTCAAAGTTGAAGAGGCTGCTAAAAAAACTGCTGACAAAAGCAAGACTATTTTGAACAACATTGAACGCTGGCAGAAGGGAGTCGCCAGCACTGATGTCTTTGGTGTTCCCATTGAAGCCACTGTACAACGAGAGCAATCTGGTAAAGCTGTGCCTCTGGTACTTGTGAGATGTGCAGATTATCTGGTTATATCAGGTTTGAGTAATGAGTACTTATTCAAATCAGAAGGTGAAAAGAAAGTTCTTCAGCAATTAGTCTCTCTTTACAATGAAGATTCAGGTTCACCTTTGCCTGATGGTGTAAACCCCATTGATGTGGCTGCACTGATAAAGTGCTATCTTGCCAGCATCCCTGAGCCACTTACTACATTCTCTCTTTATGATGAACTTAGAGATGCAAGGGTTAGCATTGCAGATTTAAGAAATATACTGAAGAAGCTTCCCAATGTGAACTACATGACACTAGAGTTTGTTACAGCACTGCTACTTAGAGTAAGCCGTAAATCATCGCTTAACAAGATGGACTCTCGTAGCCTTGCAGTGGAATTTGCTCCTTTGATCATGTGGCAGCAAGGTGATTCTGGAACAGATTTGCGGAATCATCTTAGATTTACCCTAAAAGCACCTCCAAAAATTGTGGATACAACATCAAATACCACAGAATGGGATCTGCTAGATGAGGATGATGTGGATGCTTCTTCCCAAATCCCATTGGATGACGCTTCGCCCCCAGATTACAGCTCAATTGAGGTCATCCAATCTCTGATTGAGCATCACAATGCCATTTTCACTGATGCGAATGAGACCGTATGGAGATAG</cdnaseq>

Protein Sequence

<aaseq>MPLAESPQWRQKATNFFSSSSFKLKQAGQSAGDNIADVAGKVGSVVKSRWAVFQEARQRQPPPGETVQERFISAAATTGVLLRKGISETKEKVAVGKVKVEEAAKKTADKSKTILNNIERWQKGVASTDVFGVPIEATVQREQSGKAVPLVLVRCADYLVISGLSNEYLFKSEGEKKVLQQLVSLYNEDSGSPLPDGVNPIDVAALIKCYLASIPEPLTTFSLYDELRDARVSIADLRNILKKLPNVNYMTLEFVTALLLRVSRKSSLNKMDSRSLAVEFAPLIMWQQGDSGTDLRNHLRFTLKAPPKIVDTTSNTTEWDLLDEDDVDASSQIPLDDASPPDYSSIEVIQSLIEHHNAIFTDANETVWR</aaseq>

Gene Sequence

<dnaseqindica>1..61#573..817#1336..1398#1484..1502#1747..1845#1926..2003#2092..2336#3006..3162#3364..3506#ATGCCGCTGGCGGAATCGCCTCAGTGGCGCCAGAAGGCCACGAATTTCTTCTCTTCATCCAGTACGTTCAACAGTAACCCAATCTTGGTTTTACTATAGATATAAATCATGTAGTTGTCATGCCTAATTGTCCTATACTAGTTTATGGTTTACTGTGGGTCATATTGCTGTCATGCCTTGTATTAAACTAACTTTTAGGAACTAGAGTTACTCATTAGGACAAATAGCTGGATATCATGGTACTTTTGCTGTTCCTGCCTTCCCGAGTTTGTGTTTGTAGGTAATTGTGTACTAGCTTTCCAGTGCCTTTTTTTTTCTTAGTTACTGAACTCTGTAAGTAATTTCTATGGTTTGTACTTAAGAAATGGGAGAGATTTTCCCTTTTGGTCTGGGAACAAAAAAATGCCACTCCAAGAAAGGAATTTACATGTTCTGAATTGCTCCAAGCAGTTGTGTCATGCAATTCCAAGAGTGTGACAGCCTTTTCATTCCTGTGGATTTTAAAGTAAGCAAATGATTGTTCTGCCCACTTTAGCTACAGTGCTGAAACTTATGTGGATACTCTGGTTCAGGCTTCAAGCTGAAGCAGGCAGGGCAATCAGCAGGGGACAATATAGCTGATGTTGCTGGCAAGGTTGGTTCAGTGGTTAAGAGTCGGTGGGCTGTCTTCCAGGAGGCTAGGCAGCGGCAGCCGCCACCAGGGGAGACTGTGCAAGAGCGTTTCATCTCTGCTGCTGCCACCACTGGGGTGCTTCTGAGGAAGGGCATTTCAGAGACAAAGGAGAAAGTTGCAGTGGGAAAGGTCAAAGTTGAAGAGGTGCGTGATTTTTAATAAAATCTACTTCGAGTTGCTTTTACTCAGTTGTTATCTTGTAAATTTGAAGTTTCTGCTTGTATAACATATTGTTTGAATCAAGATTCAAGTTCATGAAACAATGATTAGTACCTTTATCAGTTGATCTGTAGCACCTTCTGATTTTCCACATGAATCATGTGAACAGAAAGAATGCCTCAGCGGTAGACTGAACTGTCATAAGCCAAATATAGCAGAATAACAAATACCTTCTGTTTTGACTTTTGAAGAAAAAAAAAAGTAGTGCACCTTAGTTGTTGGCATTTGAGAACGTGGTTAGGAATTTCTTGTTGGTGGGCATATCTTTCAATCCATGGTAATATTCAAAACACCTGTACCTAAATTGAGAACATGCCATTTGATATTTGATTGGAGATTGGGGCTTGATCTTTGCATTGTGGCTATAGTTTTGGTGCCTTGTGTTAAAGTAGCAATGTTGCTTAGTGAGATTGAATTTTGTGGTTCGTTTGTCTTCGTTGCAGGCTGCTAAAAAAACTGCTGACAAAAGCAAGACTATTTTGAACAACATTGAACGCTGGCAGAAGGTTTGTGATTCACTTGTTATTGGTACTACTCTCCCTTATCTGGAGTAGGATTCTGAACTTAGTTTCTTCTGGTTCCTTGTTTCAGGGAGTCGCCAGCACTGATGGTGAGTCTGCCCAGAATGCATATATATCATTTTCATTAAGGCAGCTAAAGTTATTGCACTGTAATTGCAATTCTACAACCTTAAGCATCTAGCAGTTAGCTGGAGTACTTGATTAGCGTGCTACTCTTTGCTCAGTTTAGTTCAACAAATTTCCGTGGTATTTACTGCATGTTTTGTTTTCCTGTTTACTGATGAGTACTCATGGAAATTAAATGGCCAATAACTTTGCCTTGTGATATTGCAGTCTTTGGTGTTCCCATTGAAGCCACTGTACAACGAGAGCAATCTGGTAAAGCTGTGCCTCTGGTACTTGTGAGATGTGCAGATTATCTGGTTATATCAGGTAAAATGCTGAAACTCAATAGAAGGTGGTTTTATTACTACATTCTTTTCATACCTGACATTTAAATCTGCTTTTATTAGGTTTGAGTAATGAGTACTTATTCAAATCAGAAGGTGAAAAGAAAGTTCTTCAGCAATTAGTCTCTCTTTACAATGAAGGTACCATTTCCATTCATTATGTTTGAACTTAACTTTTGTGATCATGATTCGTTGTTGTGAGCTTTGTAAGTTTATTGTTGTTTTGCAGATTCAGGTTCACCTTTGCCTGATGGTGTAAACCCCATTGATGTGGCTGCACTGATAAAGTGCTATCTTGCCAGCATCCCTGAGCCACTTACTACATTCTCTCTTTATGATGAACTTAGAGATGCAAGGGTTAGCATTGCAGATTTAAGAAATATACTGAAGAAGCTTCCCAATGTGAACTACATGACACTAGAGTTTGTTACAGCACTGCTACTTAGAGTAAGCCGTAAATCATCGCTTAACAAGGTATATCTTATTCCTATTTTTCCTCTGCATCAATCACAACTTCTATTTAATTGGAAATGGTTCATATTATAGTTGTTTGGGCACTTCTGTAAGCCTGCCACCTTTACTAAGCAATGATTAATGCCCGAGTCATGTTTTTTCTTTCTTTTCGGTTCGTGGACAGGATAGTAAAGTGTAATTGAGTTCAGAATGCAGAATGGTTAGAAGAGTCACTGCAAACACTTTAAGAATACTAAACGCTTGCCTATTAATCGCCAGTTTTTATGTCTTATACAGGAAATCAGTTACTAATTGTATCTTACGGGAACTCATCTTGTTTTCACTGCTTTGATTTACTTGAACGATACTTTTATTAAATGTTTGATATATTTGACAGCTACTTACTATACGTTTGTGATTCAAAACAATATCTAGCAGCAATCACTTTAATAAATAATAATCTCAGTTCCAAGTCTCTTTTACATGGATTTGTGGGTCACATAGCACAACTTTTCACTATTAGTCTCTTCATAATTTAGTAATTTACATTTGGTACCCTACACTCGCATGATGGCTTTATTTGTGTTTCTCTTGTTGATATCTTTGCTATTCATTCATCATGGTAGTATTTGATCTAACACATTAAACTAGATCTTTAAACAATTTACATAAGATTTTATTCAAATGCAGATGGACTCTCGTAGCCTTGCAGTGGAATTTGCTCCTTTGATCATGTGGCAGCAAGGTGATTCTGGAACAGATTTGCGGAATCATCTTAGATTTACCCTAAAAGCACCTCCAAAAATTGTGGATACAACATCAAATACCACAGAATGGGATCTGCTAGGTATGTAAATTCTACTTTATTTATTTCACTTCTGATGATTTCTGTTGACCATTTCGACAGTCCGTGTTTTCTTCAACCTAAAAAAAGTTGCTCAGACTGTCTGCGACTTTCTCCATAGGATAGGGTGCTAGGACTAACTTTTATTCTATTAGGGATTTGGTGTTCTTTGTTTAACTGCCAATTTGCCTGAATGATTTTCAGATGAGGATGATGTGGATGCTTCTTCCCAAATCCCATTGGATGACGCTTCGCCCCCAGATTACAGCTCAATTGAGGTCATCCAATCTCTGATTGAGCATCACAATGCCATTTTCACTGATGCGAATGAGACCGTATGGAGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025715