BGIOSGA025717

From RiceWiki
Revision as of 06:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025717| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025717, complete gene.| tag = OsI_260...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025717

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025717, complete gene.

LocusTag

OsI_26036

Ensembl Transcript ID

BGIOSGA025717-TA

Ensembl Protein ID

BGIOSGA025717-PA

Length

5031

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16389033..16394063

Sequence Coding Region

16389033..16389111,16389388..16389491,16390516..16390715,16390809..16390909,16391082..16391280
,16391392..16391553,16391674..16391755,16392457..16392723,16393233..16393360
,16393901..16394063

Genome Context

<gbrowseImage1> name=IndicaChromosome07:16389033..16394063 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:16389033..16394063 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGCGGCTACAGTTGCAGGATATTTCAAGGACAAGAGCATTTTGATCACTGGCTCAACTGGATTTCTTGGAAAAATATTCGTGGAGAAGATACTGAGAATTCAGCCTGATGTGAAGAAGATTTTTCTCCTGGTGAGGGCCGCCGATACATCATCCGCGGAGCAGCGTGTGCTGAATGAGGTTATAGGGAACGAACTCTTTGGGCCCTTGCGAGAAAACTATGGATCTAATTTCTATAGCTTCATGAAGGAAAAGATATCACCTTTAGCCGGAGATATCATTAATGAGAATTTAGGCCTTGAGAGCTTGGAAATATTAAAATTGTCAAAGGAGATTGATATCATTGTTAATGGAGCTGCAACAACAAATTTTTATGAAAGATATGATGTTTCCTTGGCATCCAATGTCTTAGGAGCAAAATATGTTTGCAAATTTGCAAAGAAGTGTGCAAATCTGAAAATGTTCCTCCATATTTCCACTGCATTTGTATCTGGAGAGCAAGAAGGACTTTTATTGGAGAAGGTATTTCAGATTGGGGAAACACTGAAGGAAGGATGCCATTTAGACATTGCAGCTGAATTACAATTGGTTGAGTCTGTCAAGGCAGAACTTACGCACTCCACCAATGGTAAATCGGAGCAAACAGAAAAGATAACCATGAAGAAACTTGGATTGAAGAGAGCTAGACAATTTGGGTGGCCCAACACGTATGTGTTCACAAAGGCAATGGGTGAGATGCTAGTTGGACACTTTGGGCGTGAACTTCCGGTTGTGATTATTCGCCCAAGTACTGTATCCAGCATTTACCATGATCCGCTCCCTGGGTGGATAGAAGGAACTAGGACAATTGACAGTATAATTTCTGCTTACGCCAAGCAAACTATTCCACATTTCATCGGTGCTGGTCATGTCATCCTTGATGTGATTCCCGGTGATATGGTGGTGAATGCGATGTTGGTAGCCATGGCCGTTCACTGGAGTGAGAGAGGCCAAGTTATCATCCATGTGACATCATCCCAGCAGAACCCGTTGTCAACCTCTACCATGCTGGACTTGATGTATCGCTATTTTACTGCTAATCCACAGACAATGGGAAAGAACGGAAAAGTCGTCAAAACCAAAAGGCTCAACATTACCAATAAAACAGGTTTCCGAGCATACATGTTTCTTAAATACAAGCTACCTTTAGAGGTTCTGCATTTGGTGAATCCACTGTTGGATGGATATTTTTCTCAGTATTACAATAAATCCATAAGAAGCTACAGATATTTCGTTCTTCTGGCCAAGTTATACATGCCATATGCTTTCTTCAACGCCTGCTTCAATGGCACAAACTTGGCAAGACTGCAGACGGCGACAACTCAAGACCAGAGCAAAGAAGCCTGTGTGCTTAATTTTGATCCCAAGTCCATTGACTGGGAGTACTATCTGTACAACAGCCACATACCTGGCGTTATGAAGTATGCCCACAAAAAGAAGTAG</cdnaseq>

Protein Sequence

<aaseq>MDAATVAGYFKDKSILITGSTGFLGKIFVEKILRIQPDVKKIFLLVRAADTSSAEQRVLNEVIGNELFGPLRENYGSNFYSFMKEKISPLAGDIINENLGLESLEILKLSKEIDIIVNGAATTNFYERYDVSLASNVLGAKYVCKFAKKCANLKMFLHISTAFVSGEQEGLLLEKVFQIGETLKEGCHLDIAAELQLVESVKAELTHSTNGKSEQTEKITMKKLGLKRARQFGWPNTYVFTKAMGEMLVGHFGRELPVVIIRPSTVSSIYHDPLPGWIEGTRTIDSIISAYAKQTIPHFIGAGHVILDVIPGDMVVNAMLVAMAVHWSERGQVIIHVTSSQQNPLSTSTMLDLMYRYFTANPQTMGKNGKVVKTKRLNITNKTGFRAYMFLKYKLPLEVLHLVNPLLDGYFSQYYNKSIRSYRYFVLLAKLYMPYAFFNACFNGTNLARLQTATTQDQSKEACVLNFDPKSIDWEYYLYNSHIPGVMKYAHKKK</aaseq>

Gene Sequence

<dnaseqindica>1..79#356..459#1484..1683#1777..1877#2050..2248#2360..2521#2642..2723#3425..3691#4201..4328#4869..5031#ATGGACGCGGCTACAGTTGCAGGATATTTCAAGGACAAGAGCATTTTGATCACTGGCTCAACTGGATTTCTTGGAAAAAGTACTCCTACACCCAACAACCCATAAAGCATTTTAAACTTGCAGTACAACTTAAAACCACACATTTCATATAGAAAGAACTTCTACACACACTCAAATCAAGTCTAACTTATACATCAACTTCTTTGGCATAAACAAGTTCATTTACATGTTATATTTATATGTTATTTTTTGTTCATTCATATCTATGTCATCACGATGATTAATTGTTTTAATTTCATTTGTTGGTTAATTAATCCGCCATGTTCTGTCTGATTTTCTTGGACATACGCTGCAGTATTCGTGGAGAAGATACTGAGAATTCAGCCTGATGTGAAGAAGATTTTTCTCCTGGTGAGGGCCGCCGATACATCATCCGCGGAGCAGCGTGTGCTGAATGAGGTGCTTAATTAATTACTACTCCAAGCTGATGGTTTCCTGTAGAGAATTACTGGTCCTATTTTTTTTTCTTTGATTAGTAGAATTAACAGCCTCCAGTTTAACCAATCAGGGCTGATCTGGCGTAGTGTGATCGTTTTGGTTCTTCCTAGGACACTTGTACTGTGGCCGTTTAATTAGTCTTAGTTTGTTAGTGCTAAGAACGAAAATTATTATAGGATCTTATTCAAATTAATCTCTGATTAATCAAGAATAGGTGTCAATAAAGCGGAATTAGAAATCGTGATTTACATGAATTAAACTGGGACCAACTTGATGCATGGATGCGATGCCTGCATTGAGAGTGAACTGGAGTTGGAAGACGAGATCCTCCAATTGTTGATATAGTACGGATTGGTTCTGGAGGTTGCGGATTGTTCCAAGGACATCCTGAATCGGCTCAAATTAGTTATGACCATCAAACCTGTCATGTGCTCTCGTTAGAGAATTTTTTTAAAAAAATTAGTTTCCAATTAGAGAATTTTTTTTAAATAAAGTTTGTGAATAGAGATACATACGTCTAAAAGTCTAGCGCATATGGGATCTATGTGAGGTCCAACCGTTTGCATGACGCGTACAACGCGCGGTCGCACGTCTCTATGAAAGTACTTTGGAGAACAGGGTTTGTCTCCTTTTATAGCGTATTCTAACTTTTGACTTGGGATTTAGCCTCTCAAAAAAGGGCATCTTTCCCCGAAAAAAAAGGGGCATCTTGATAAAGAACCCCTTATGGTAGCCTAGCTAATTACTTATATATATCTTAATTATGAACATATATAAACTAATGAGTTATTAATTATGAACAAATATATATCTAATTTTGCCCCTCATTTGTCATGACTATTTTGACTAGATGGAACTAACAAGAACCTATACCATCGAGGACTACTTAAAATTCAATTCCCTTTCTTTGGACCCTTTTATCTGACCCTGTAAAAAATTATTTAAGTAGTCATCAAGTACTAAGATTGTAATGTTTTTCCTGTAGGTTATAGGGAACGAACTCTTTGGGCCCTTGCGAGAAAACTATGGATCTAATTTCTATAGCTTCATGAAGGAAAAGATATCACCTTTAGCCGGAGATATCATTAATGAGAATTTAGGCCTTGAGAGCTTGGAAATATTAAAATTGTCAAAGGAGATTGATATCATTGTTAATGGAGCTGCAACAACAAATTTTTATGAAAGGTAAACATTTCATCAACAGTGAATATTATCCACAAAAGAGGAAAAGCCAATAAATTTTGGTAATTCAACTTATATTTAGTAAAATGCATGCAGATATGATGTTTCCTTGGCATCCAATGTCTTAGGAGCAAAATATGTTTGCAAATTTGCAAAGAAGTGTGCAAATCTGAAAATGTTCCTCCATATTTCCACTGGTATGTACAATGTAAATAACTAAATATAGTATAAATCAGTTTGTCCCTCAATATGCATGCATACATAACGTACCATGCATGTACTACTTGCAAGAATCACTGTGACATATATATAAGCAAAATTTTTGTGTGAATAAAAGTTATGATCTATTGAATGTTTTTGACTGAACAGCATTTGTATCTGGAGAGCAAGAAGGACTTTTATTGGAGAAGGTATTTCAGATTGGGGAAACACTGAAGGAAGGATGCCATTTAGACATTGCAGCTGAATTACAATTGGTTGAGTCTGTCAAGGCAGAACTTACGCACTCCACCAATGGTAAATCGGAGCAAACAGAAAAGATAACCATGAAGAAACTTGGATTGAAGAGGTCTAAAAATATATATAACAGTTGAATTTTTATATATATATGTAAGCAAGGATATTAATTTTTTTCTTTGGCATTTAATACTGACATGTGAAACTTGTTCTTTTTGTTAAGAGCTAGACAATTTGGGTGGCCCAACACGTATGTGTTCACAAAGGCAATGGGTGAGATGCTAGTTGGACACTTTGGGCGTGAACTTCCGGTTGTGATTATTCGCCCAAGTACTGTATCCAGCATTTACCATGATCCGCTCCCTGGGTGGATAGAAGGAACTAGGTATACCTCATATTTATTAATAGAAATATACTCTAATAACTGGTTCACCAAACCGCAAATTATGTTTACATAATTAGTAACTCTACATGACCAAAAATATGTTATGCGTGTCTTTTGTAGGACAATTGACAGTATAATTTCTGCTTACGCCAAGCAAACTATTCCACATTTCATCGGTGCTGGTCATGTCATCCTTGATGTGGTAAGAACTACAGTAATGCCCAACAAATACTCCTTTTTTTAATATACAACGACATTATTTTTTATTGATTTTCAACCATTTGTTTTATTAAACAATTATATAAATATTGCATTTTAGTGACTTGTGTTATCATCAAAGAAACTCTGACATTAACTTATATTTTTAGATATTTACATTAAATTTTTAAATAAGAAGAATGCTTAAACATAATGTGAAAAGTAATGGTATCATATATAAAAACAGATGTGCTATTAATTTTAATTGAGTAAATTTGAGGAAAACCCGTGTTTTATGATAAAAGTGCATAAAAGCACAGGTATTATGGCATGTAACCATATGTTTTTCTTTTGTCTATATGTTTTGTAAAACACCACCTTTATTAAAATATTGATTAATTTTGACATACTTGAAATATTGTTTCAAAGTAGCAAAGAGTTAAACTATGAACCTTATCATCCTTAGTCAAAAACTTAATAATTAAAATTTCCGTATATATTTTAGAATTATAAGTAAATTCACGCTCAACATGTACAATGATGGGGTTTTGTAAAACGTTTGAACTATAATACATAAGGTATATGCAACAAATCATAATACCTTTGTTTTTTTTTCTGAAATTTACTCATTTTAATTAATTCCCTCTCTTCTAGATCGAATTCAATAAGCTTATAAACAACGTCGTGTTCTATTTAAATATATAGATTCCCGGTGATATGGTGGTGAATGCGATGTTGGTAGCCATGGCCGTTCACTGGAGTGAGAGAGGCCAAGTTATCATCCATGTGACATCATCCCAGCAGAACCCGTTGTCAACCTCTACCATGCTGGACTTGATGTATCGCTATTTTACTGCTAATCCACAGACAATGGGAAAGAACGGAAAAGTCGTCAAAACCAAAAGGCTCAACATTACCAATAAAACAGGTTTCCGAGCATACATGTTTCTTAAATACAAGCTACCTTTAGAGGTCAGACTCTTTTTGTCTTTTAGATCACACCAGGCTCTTTTTTTTTCTAACAAATATAACGAGTAAATTACACTTTGCACCGGGTAAAGCATAACTAGTTTCACTTTGCATCAGATTTAACACATATTTCCAGTTAGACTATTTAAATTTAAACCATGACCAGGCTGCATTATCAAATTAATTAACCTATCGAAATTTCATCAAATTTTATAAATTGTTGATGAAACTTTGTGAAATGTGGTTTAAATTTAAATAGTTTCATAAGTTTCGGTCATGGTTTATAAGATTTTCATTCACTTATATGATGCAATCTAGTGCAAATTAAGTGAAAATTATTTTGATATCTCTGTTGTAAAAGTGAAAGTAAGCAGTAAACCCAGTTTAAAGTGAAACAAGATACATTTTACCCGGTGTAAAATATAATTTATAGCAGTTTTAATCTCAATATATGGCTAACACATGAATCCGGCCGGTGCATGACTTGACTATATCGATCCTTTGTTACCCAGGTTCTGCATTTGGTGAATCCACTGTTGGATGGATATTTTTCTCAGTATTACAATAAATCCATAAGAAGCTACAGATATTTCGTTCTTCTGGCCAAGTTATACATGCCATATGCTTTCTTCAACGCCTGGTATATTATTTTACAACCTTTTCTTTTTCTGCTGCTAGTGCTAGGTATATAGCTAGAAGATAAATCATGACATAACAAAGTTATTATGTGAGCAAATAATAAATATGTTTTACATATTGCTTCCTTATGCTACCCAGTTATTAATTGATTAACCCATTTGAATAAAAAAGTTACAGGCATACTTATAATGCAGGCTTTTATAATTTTCAGATATCAACATGTTTGACAGACAAATAAGATGATCAATAGATATATATTCTCTAAAAGTAACTTAATTAATTATATGGTTTTTGCAGATATAGTAGTATAGAAATTACTGGTTTAATTTGTCTTTTTAGTGCCAAGTTGATCAGTACTTTTTGGTGCCATGTCGATCAGTACCCAAAGAATCACATGTTCGTAGAGAAAAAAATGTCAATTTACAAGTGAAAGTTTAGGTGTGAAATTTGAAAGCAAATCATTCTACAGTAAATTAGAAATAGCTCTGATTTTCATTGTCAATCTTCTTATCATTCTTTTGTTTTTCATGCGCACGCGTAGCTTCAATGGCACAAACTTGGCAAGACTGCAGACGGCGACAACTCAAGACCAGAGCAAAGAAGCCTGTGTGCTTAATTTTGATCCCAAGTCCATTGACTGGGAGTACTATCTGTACAACAGCCACATACCTGGCGTTATGAAGTATGCCCACAAAAAGAAGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025717

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025717&oldid=51311"