BGIOSGA025760

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Revision as of 06:33, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025760| Description = BGIOSGA025760| Definition = Oryza sativa Indica Group BGIOSGA025760, complete gene.| tag = | tid = BGIOSGA025760-TA|...")
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Gene Name

BGIOSGA025760

Description

BGIOSGA025760

Definition

Oryza sativa Indica Group BGIOSGA025760, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA025760-TA

Ensembl Protein ID

BGIOSGA025760-PA

Length

4685

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:16997786..17002470

Sequence Coding Region

16997786..16998544,16999864..16999982,17000179..17000784,17001006..17001282,17001350..17001497
,17002143..17002230,17002353..17002470

Genome Context

<gbrowseImage1> name=IndicaChromosome07:16997786..17002470 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:16997786..17002470 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGGACCCCTCCAGGGCATCCTCCAGGCAGCCTGCCAGGGGGTTCTTCAACATCCTCGTCCCGCCGCCGCAGTCGCCGCGCCCGCGCTGCCCCGACCAACAACACCAACAAAAACAACAACAACACGATGCTGCTGGTGGCGCGGCGGCGGCGGCGGCGGCGGAGCCCACGCCGAGGCGGCGGAAGCAGATACTGGATCGGTGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCTCCCGCCCGCGGCGCCGCGCGCGTCGTCGCTGATCCAGCGGTGGCGGGAGATCGAGCCGGTGGGGCCCGCCACGCCGCGGCCCTGCGACCTGGCCTCCGACTCCGACGGCGGCTCGCCGCGGGGCCGCGTGGGGTGCATCGTCAAGAAGCTCAGCGGCACGTCGTCGATCCCCGACGACGAGCTGGACGCCGCCAACAAGGAGGTCGCGATGTCGCAGTCCGCGCCCCCGTCGCCCGCGCCGATGCGCGCCGGGGTGGAGCCGCCCACCAACATCGCCGGTATCAACGGGTCCAGGCCGACGCAGCTGGTAGTCCGCACGGTGCGTGGCCGCCGCGCAATGGAGGAGCTCGTCGCCATGATGGCCCATTGCCGGAGATGCGAGCTCGCCGCGGTCGCCGACCGCCACGTCGTGTCGCGGTTCTCGCACAAAGGCAGGATCCAGTCCATGCTTCGTCTTAGGCTGTTGCGTCAGGGATTTAAAGTTAAGGATGAAGTTTGGACTCTACCAAAACCAGTCAGGCCACGCCTTCCAAAACATGAGCATGAGGCCTATACCACAAGCCAATGCCTAACACAAGCTTTTCTCAGCAAGTGCATTGCTGGTAACCAACATAAGGGTGGCCAGGTTTTGGCTGAGAAGTCTACTGGTTCTGTTGAGAGACTAGTTTCTTCGGATGGTTTAGGAAATGAACAAAATGATGGGCAGAACAGCAACAGTGAAAATCAATGTCAGGAAGGTTGCAAAAACATGGTAAAATTATGTACCCAGAATCAGGAATATTCTGAGCCATCGAGTTTCGTGAGGTATGACGAGCATAGTACCGTTGATGATGTCTCGCCAAGTACCATAAGCACATTGCATGAACTTTGCACTCCATCCTCAAGGGGTGATAATCTAAGAGAAGAAGACAACCAAAGCCTGAATGGTTCATGGGAAGAGAGGGCACTATGGATAAGTAGTCTTGGTTGGCCTGCACCAGTGGAAGCCATGAGTCCAGACAGCTGGAATCAGGATGAAATTGGGGATATTGAGAATCACACTCAGAATGAATTTAATGATCGCCCCTGGATAGACTCCCCTAACTCATGGAGATCATTGTGTGTTGCCACACAAGCAGACAGCGGTGCTTTGTCTGGCAATGCTGACATCTGCAATCTTCTTGAGAGCAAAAATGTCTCAAAGTCTCTTGAGAGTGATTTTAGCAATAAAATGAACAACATGTTGCTAACAATCTTGCGCAAACAAAGGCAACAACACATGATTGATGATTTTGAAGGATATTATGATGAGCGCTTATACTGGAGACAGAATGATGAACAACAGAATGCTGATCAGAGGGTATCTGCACAGTGTTCATTAGCACCTGTCTCCCATCTCCACCAACAAGAAGGCTGGCAGCATTCTTCGTTTGAACATCAACATCATGAAAACCAAAACTTCCTTGAAATGGAGGTCAGGGTTAGAAGTGAAATGGCACAGGTCCATCATGAAATATATGAACTACGGAAGTTGGTGGAAAGTTGTATTGCATCCCAAGTAAAGATCCAGCACTCCATTAAAGAGGAGATGTGCAGTGCACTTCGCGAAGCAGGGTTGATGCCAAGCCAACCCGACACACCAGCAAAAAGGGGAAGCTGCTGCATCTGCCATCAGACGCAAGTTGACTCTCTACTTTACAGGTGTGGACATATGTGCACCTGTTTCAATTGCGCCGATCAGCTGAAATCGAGCAACAGGAGTTGCCCAATCTGCCAATCTCCTATTGAGGATGTTGTTCGAGCGCATATGAATTTTTGA</cdnaseq>

Protein Sequence

<aaseq>MEGPLQGILQAACQGVLQHPRPAAAVAAPALPRPTTPTKTTTTRCCWWRGGGGGGGAHAEAAEADTGSVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXELPPAAPRASSLIQRWREIEPVGPATPRPCDLASDSDGGSPRGRVGCIVKKLSGTSSIPDDELDAANKEVAMSQSAPPSPAPMRAGVEPPTNIAGINGSRPTQLVVRTVRGRRAMEELVAMMAHCRRCELAAVADRHVVSRFSHKGRIQSMLRLRLLRQGFKVKDEVWTLPKPVRPRLPKHEHEAYTTSQCLTQAFLSKCIAGNQHKGGQVLAEKSTGSVERLVSSDGLGNEQNDGQNSNSENQCQEGCKNMVKLCTQNQEYSEPSSFVRYDEHSTVDDVSPSTISTLHELCTPSSRGDNLREEDNQSLNGSWEERALWISSLGWPAPVEAMSPDSWNQDEIGDIENHTQNEFNDRPWIDSPNSWRSLCVATQADSGALSGNADICNLLESKNVSKSLESDFSNKMNNMLLTILRKQRQQHMIDDFEGYYDERLYWRQNDEQQNADQRVSAQCSLAPVSHLHQQEGWQHSSFEHQHHENQNFLEMEVRVRSEMAQVHHEIYELRKLVESCIASQVKIQHSIKEEMCSALREAGLMPSQPDTPAKRGSCCICHQTQVDSLLYRCGHMCTCFNCADQLKSSNRSCPICQSPIEDVVRAHMNF</aaseq>

Gene Sequence

<dnaseqindica>1..759#2079..2197#2394..2999#3221..3497#3565..3712#4358..4445#4568..4685#ATGGAGGGACCCCTCCAGGGCATCCTCCAGGCAGCCTGCCAGGGGGTTCTTCAACATCCTCGTCCCGCCGCCGCAGTCGCCGCGCCCGCGCTGCCCCGACCAACAACACCAACAAAAACAACAACAACACGATGCTGCTGGTGGCGCGGCGGCGGCGGCGGCGGCGGAGCCCACGCCGAGGCGGCGGAAGCAGATACTGGATCGGTGGGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCGAGCTCCCGCCCGCGGCGCCGCGCGCGTCGTCGCTGATCCAGCGGTGGCGGGAGATCGAGCCGGTGGGGCCCGCCACGCCGCGGCCCTGCGACCTGGCCTCCGACTCCGACGGCGGCTCGCCGCGGGGCCGCGTGGGGTGCATCGTCAAGAAGCTCAGCGGCACGTCGTCGATCCCCGACGACGAGCTGGACGCCGCCAACAAGGAGGTCGCGATGTCGCAGTCCGCGCCCCCGTCGCCCGCGCCGATGCGCGCCGGGGTGGAGCCGCCCACCAACATCGCCGGTATCAACGGGTCCAGGCCGACGCAGCTGGTAGTCCGCACGGTGCGTGGCCGCCGCGCAATGGAGGAGCTCGTCGCCATGATGGCCCATTGCCGGAGATGCGAGCTCGCCGCGGTCGCCGACCGCCACGTCGTGTCGCGGTTCTCGCACAAAGGCAGGATCCAGGTGAACTCCCCATTCTCTCATGCGGCTCTCTTTTTTTTTTTTAGGAAAAAAAAAGAAGGAAAAACCATATTTGCAAAACGCAATGGATATTTGGATCAAATTACAAGTAATCATGGATCAAAGTACTTGTTTGTCGATTAACCAAGTGGGATATTGTTCTGTTTCTTGATCGAGAAATCATTATTTTAAGACGAGCCAAGAAGTTAGAAGTGTGAGTTGTTGATTTTGACCCCGTAGTCCCCCAAGGATGGGGCCATATGGCTGTTTGGTAGATCATGTTCCCAACTGGCACTGCTGATCATTGTCATGTGCAAATCACATTATCATGTTTCGTTTTGCAGGTTCGTTAATATGCTAGGATAAACCAAAATGTGATAAAAAATGAGCTAAACTTAGGACTTGATTATCGCAAATAGTGATATGCTAATAGCCATTGTTGACTGGTTCAATATGTAGTAGAACAGCAACGAAAGCTCTACTAGAAGATCCAAGAATATTTTGGGAGCTCTATTGCTATACACGCAATGTCCAGTGTAGCAGAGAGGGTAAATCTAGTGGACGAGATGTCACAAGTGAATAACATCTCTCGTTTGTCTTGTTTGTTTGCTGGCACGTCCGGAATCTGACGTCCTGTGGAGCTTGTGGATGCTGCAGAGTTGTGGCTAAGAGGCCACACGAAACATATCACGTGACTAGACAGGTTGCTTGCTTGCTATAGTGTGCACTTGTTGCACATAAATATGATTAATGGCAGAGCAGTTTGTTAATTGGAAGTACAACGCAAATTTCAACTGTTTATTAATGGCAATTGCCTTTTAGGTTGGATTTTTATGCTACGGTACCAGCATTACTTGCAACATTTTTGGATATTCTTCACTCCAACTCCAGCGAATATTAATGTGCATGTTTCCTAGGAAAGCTGAACTTTTTCCTGGAGAATACATGCCGGTGTGTAGCTCAAGTATGGGCTGTGTTTGGAAGCAACAAATTTGTTTTGGCCACAAATATTAAGCAAGAATCTCGATTACTTGATGCCCTTTTTTGCATATCCAAGGCATAAATTGTGTTTTTGTTCTTTTCTCTGTGAACAAGATTATTCCTTCCTCTTGTCAAAGATTGGTAAATACAATAGAGATTCACCTTTTATATGGTACAGCCATCATTGTTTTGGCTGCTAAGTGCCAACACACATGCACAAAAGTATGTATTCTCTGGTTTATTTCATTAGATTGTATCTATGCGAACACAAGTACTTTTTAAGCTTGTTTGTTCCTTATGTGGCTTCCGCTAATATTGTCATGCTCTTTGACACCTTGCAGTCCATGCTTCGTCTTAGGCTGTTGCGTCAGGGATTTAAAGTTAAGGATGAAGTTTGGACTCTACCAAAACCAGTCAGGCCACGCCTTCCAAAACATGAGCATGAGGCCTATACCACAAGGTATTAATATGCTCTTTGGTAACTAAACCATCATCTTGTACTAGTGGATGTGAAAATATAACATTACATGTGTTCTTTTCCACTACTTTCATGTCTGTCATTCCTAGTCCTTTTCAGCTTGCAGTAAGTTTAGAATATTTTTTCCCTGAAAAGAAACATAAGTTCAGAATGTTTTACTACTTCCCTTTTTTGTGAGCCAATGCCTAACACAAGCTTTTCTCAGCAAGTGCATTGCTGGTAACCAACATAAGGGTGGCCAGGTTTTGGCTGAGAAGTCTACTGGTTCTGTTGAGAGACTAGTTTCTTCGGATGGTTTAGGAAATGAACAAAATGATGGGCAGAACAGCAACAGTGAAAATCAATGTCAGGAAGGTTGCAAAAACATGGTAAAATTATGTACCCAGAATCAGGAATATTCTGAGCCATCGAGTTTCGTGAGGTATGACGAGCATAGTACCGTTGATGATGTCTCGCCAAGTACCATAAGCACATTGCATGAACTTTGCACTCCATCCTCAAGGGGTGATAATCTAAGAGAAGAAGACAACCAAAGCCTGAATGGTTCATGGGAAGAGAGGGCACTATGGATAAGTAGTCTTGGTTGGCCTGCACCAGTGGAAGCCATGAGTCCAGACAGCTGGAATCAGGATGAAATTGGGGATATTGAGAATCACACTCAGAATGAATTTAATGATCGCCCCTGGATAGACTCCCCTAACTCATGGAGATCATTGTGTGTTGCCACACAAGCAGACAGCGGTGCTTTGTCTGGCAATGCTGACATCTGCAATCTTCTTGAGAGGTAAATAAACCTTTTTACATATGTGCTCCAGTAATTATATGCAAATCACTTCCAAAGAACTGAGAATACTAATTAAGATGCACGTTTTCCATAAAGGTCCACTTCCTTTTTGTTTTATATTTGGTTCTAAACCTTTACTTTGCATGTGCCAATTATATTCCATAATCTTATTTGTACATACTAAACCATATTAAGCCATGATATTTCCCCTTCCCTTGCAGCAAAAATGTCTCAAAGTCTCTTGAGAGTGATTTTAGCAATAAAATGAACAACATGTTGCTAACAATCTTGCGCAAACAAAGGCAACAACACATGATTGATGATTTTGAAGGATATTATGATGAGCGCTTATACTGGAGACAGAATGATGAACAACAGAATGCTGATCAGAGGGTATCTGCACAGTGTTCATTAGCACCTGTCTCCCATCTCCACCAACAAGAAGGCTGGCAGCATTCTTCGTTTGAACATCAACATCATGAAAACCAAAACTTCCTTGTAAGTCTTGTGCTCTTCAAGTCAGTTCGTGTGCAAGTCATATTCTCACTATATTTCTGTGTTACAGGAAATGGAGGTCAGGGTTAGAAGTGAAATGGCACAGGTCCATCATGAAATATATGAACTACGGAAGTTGGTGGAAAGTTGTATTGCATCCCAAGTAAAGATCCAGCACTCCATTAAAGAGGAGATGTGCAGTGCACTTCGCGAAGCAGGTGAGTTGTGATGGAAGTTTTATAAATTTGTCATTCCTATCTACAAACCGCAACAACCAAAATGTTGTCCAGACTCCAGAATATGCATGAAACGGAAGAGCCTCATTTTCATATTCTAATATGGAATCTACGACCCTATAACGCAATCCCTAGCCTTTTCAGAACTGAGGCTTCCTATAGAAGATTGCACTGAAGACAATATGAACTGTGAGGGCAAGTGAGCTAGTAGGTTGCCTTTAATGGACAGTCAAATGAGATCTGGAGAAAAAGAACACAGTTGGTTATGGAGTGACTATTGGAAATAGTTACTCTAGTCTTGGAACTTGAAAGCAAAACTATGCGCCATCTTTTTGCTCAAATCTGGGCCTGGACCAACTCTCTAAACTAATACTATATAATTGTTAGTTTTTAGGCTTTCTGTGGCACCTTTAGGCTGCTTTATGGAATTGACAGATTTTTGTGGTGTGCCATGCTGTTGTTTTTTTTAAAAAAGATTAAAATACCATGTGAACTTTGGTGTGTTCTTTTTCACTACTGCCACTTTGCACCTTATTGAGTGCTTAATTTTACCTCATCTGTAATCATTGATGCACACTTTTTACACTTCAACATCCATTTTTTTTCTGATGCCATTATTTTCAACAGGGTTGATGCCAAGCCAACCCGACACACCAGCAAAAAGGGGAAGCTGCTGCATCTGCCATCAGACGCAAGTTGACTCTCTACTTTACAGGTAATGATTTGCATGGCTAGATTATGTTCTTTGACTCACTTCACATCTTATGTCTCACAATTTAACAAGAAACGATGATACGGCTCGCAATCTTGCTAAGTGTGTTATCATCTTTCATTCAGGTGTGGACATATGTGCACCTGTTTCAATTGCGCCGATCAGCTGAAATCGAGCAACAGGAGTTGCCCAATCTGCCAATCTCCTATTGAGGATGTTGTTCGAGCGCATATGAATTTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025760