BGIOSGA025778

From RiceWiki
Revision as of 06:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025778| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025778, complete gene.| tag = OsI_261...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025778

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025778, complete gene.

LocusTag

OsI_26154

Ensembl Transcript ID

BGIOSGA025778-TA

Ensembl Protein ID

BGIOSGA025778-PA

Length

7093

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17592350..17599442

Sequence Coding Region

17592350..17592459,17593147..17593381,17593485..17593646,17593724..17593765,17593887..17593958
,17594237..17594316,17594916..17595013,17595645..17595692,17595938..17596038
,17596283..17596400,17597460..17597656,17599071..17599442

Genome Context

<gbrowseImage1> name=IndicaChromosome07:17592350..17599442 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:17592350..17599442 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCGGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAGACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATAGCTGGAATGAGAGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATTAAGCCATCAGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCCGGTGCTTATCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTAAATGAGTGTGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGACCGGAGACATCATGAATGTTGATGTAAATGTGTTCCTGAACGGATACCATGGGGGTGCTTCTAGAACATTTGTATGTGGAGAAGTGGATGACTCTATCAGGCATTTTCTGAAGGCAGCTGAAGAATGCTTGGAGAAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGCAAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTGGCATTCTGAGCCACTAATCCTACATCATGCCAATGACAACTCTGGGCGAATGGTTGAAGGTCAGACATTTACAATTGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTCCACATGTGGCAGGATTACAGATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTATGAGTCGAGGCGGCCGGCCGCCGCCCTTCCCCTCTCCAGAAGCATCTCCGGCGAGGAGTACGAGGACCTGATGCCAGTGATGACCGGGTGGCTGGGCGACCTGGCAAGCGGCACCATCACCGTGGAGAGCCCTGCGGTCGCCGGTCCCGTCCTTCTGGGTTGCCGCCACCACCGAGCACGACCATCCCAGTCGCAGTTTAAGAAACCGAAAACAACTTTTAGGAGGGAGATTATGGGAGAACTGTTGGTGATGAGCTGGGATTGCCGATGCGGATGCTTCCGTCGACCGCCGGCGGTGGCGGCGGAGGTTGTTCTGCTCCTCGATCGTCGGCCGCGCCGGTGCTTCTTTCCTTTTTCGCCGGGAGTCCGCGTCGGAGCCATGAGCAGTCCAGAAATTCAGAAGTTGGCAGACGAAGTGTGCAGTGCAGCAGCACAGTCAGTGCCTAGCGTCTGCTACTGCTCTGCATCATTTGTGGATCTTCGTCACATATGGTATGGGTATGAATTGGAGTATTGGACTATTGGAGAACGGAGACGAGCCATTGCAAGTTTGCAACGCAGCGCATGA</cdnaseq>

Protein Sequence

<aaseq>MAAAGRVPGVALATRLPRRRVPRCPPCRRLSHPLPLRSQEPSSASSKKRPPLRRGKISPQLPVPEHIPRPSYVGSNRPQELSSVRQIHSAEGIAGMRAACKLAARALDFAGTLIKPSVTTNEIDREVHNMIIEAGAYPSQLGYGGFPKSICTSLNECVCHGVPDSTQLQTGDIMNVDVNVFLNGYHGGASRTFVCGEVDDSIRHFLKAAEECLEKGITVCRDGVNYKKIGKKISKLAYFYGYYVVDRFVGHGIGPIWHSEPLILHHANDNSGRMVEGQTFTIEPILTMEKAETVTWEDGWTTVTADGSWAAQFKHTVHMWQDYRSQAEELIDEICDESSVPGEWLVRRVCGSLEFYESRRPAAALPLSRSISGEEYEDLMPVMTGWLGDLASGTITVESPAVAGPVLLGCRHHRARPSQSQFKKPKTTFRREIMGELLVMSWDCRCGCFRRPPAVAAEVVLLLDRRPRRCFFPFSPGVRVGAMSSPEIQKLADEVCSAAAQSVPSVCYCSASFVDLRHIWYGYELEYWTIGERRRAIASLQRSA</aaseq>

Gene Sequence

<dnaseqindica>1..110#798..1032#1136..1297#1375..1416#1538..1609#1888..1967#2567..2664#3296..3343#3589..3689#3934..4051#5111..5307#6722..7093#ATGGCCGCGGCCGGGCGCGTGCCTGGCGTCGCGCTCGCCACCCGCCTTCCTCGCCGGCGGGTTCCTCGCTGCCCGCCCTGCCGCCGTCTCTCCCATCCCCTCCCGCTCCGGTACGGATGGATGGATGGGCATACTAGGGTGTGCCCGCCCAACCTCTTCCCCTTCTTCGTTCTCCTCCCTGTATGCTATTTGGATAATCCCACATGTTCACACCTGCCAATTTCTAGTTAATCTGGTTGCGATGTGATCGTTTGTACCATTGCATGCCGTCTGGGTGGAGGTCTGCGCATTTTTTTTTATAATGTGTACCTAGACCATTTAGGTTGCATTCGTTCTTTTAGTTATTTGTTTGTTTTCCTACTGCACTTGCAATTCTTCCAATAGGAAAGCTTTGCACTCTCTTATTATGGTTAATTGGTTATGTATGCGCGTACAAGGTTGCGAAGTTCACTAGTCATCTTGTCAAAGAGGATAACGTTTATGTACCTTTCGTCAAGACCAATGGGTTCAACTGAGCACACCTGACCTGATTCTTCTTGGTTGTCTTGCTGTAGGGAAATCAATCGCACCGAGCCGACGCTTTATCGTGTCTAATAAACTTGCTTGGGTTGAAGATGAGTTAGTGGAGATAACAGAGTACAGTTCTTGTTACTATCACTTTGTTTTTTAGCTCGTTGCTTCCTTTTTATTGCTACATTGCTTGCTATGGGAACTAGGCTCTAGATTTCTAATATGTTTTCGACAGTTTTGACTGAAATGGTATTAATAATTCTGCAAACACCATTACACATTTGAAGGTCACAAGAGCCAAGCTCCGCAAGTTCAAAGAAAAGGCCACCTTTGAGGCGTGGGAAAATCTCTCCACAACTTCCGGTGCCAGAACACATTCCGAGACCATCTTATGTAGGTTCGAATAGACCGCAAGAACTATCTAGTGTGCGCCAAATACACAGTGCTGAAGGTATAGCTGGAATGAGAGCTGCTTGCAAACTTGCTGCCCGTGCTCTGGACTTTGCTGGAACATTGATTAAGGTAAATACTATTGTTTGGTAGATTACTGAATTTCTCTCTTTTTCTATATTATTTTGCATATTATGTAGTTCATAATATGACTATTGTTTCCATGTTGCCTCAGCCATCAGTTACTACAAATGAAATTGACAGGGAAGTGCATAACATGATAATTGAGGCCGGTGCTTATCCTTCTCAACTTGGCTATGGTGGATTTCCTAAAAGTATCTGCACGTCACTAAATGAGTGTGTCTGTCACGGAGTACCTGACTCAACACAACTGCAGGTTCTATAAAGTGAAAGTTGCCTCTTTCTATCTGTATGTACCTATGCAATGTGGGCTGATAAGTCCTCCTATTGCAGACCGGAGACATCATGAATGTTGATGTAAATGTGTTCCTGAACGTGAGTTCTCCCTTTCGATGTTTTGTTTATGTTTAGTTGGTAACTTTGTATATTTTGCTTAGAGCTGGATTATTATATGCCATTTTCTAGTTTGTAATAAGATCTGCATCTTTCTCTTCAGGGATACCATGGGGGTGCTTCTAGAACATTTGTATGTGGAGAAGTGGATGACTCTATCAGGCATTTTCTGAAGGTAAGCTATTATTGATGTGGCAGATGGTTCATTCAGTATGCTCTGTAGTGATTTGCACTAACACAAATTTTAGGATCATTATGCATTTATGGTTTGTGCATCATGATGTGTCTGATTTCCTCTGTAATGTTTGTTGACCTCATAAATTTATTAATTTCGGTGCAGAATGTTCTGTGAGGAGTTTTGCATTTGGGTCATATCACACTAATCTCTTTTTATTATTGATTAACAATTATTTCTTACATCAGAACATTAATGAATGATCTTTATTGGAACAGGCAGCTGAAGAATGCTTGGAGAAGGGTATTACAGTCTGCAGGGATGGTGTCAACTACAAAAAGATTGGCAAGAAAATAAGGTACTTGCGTGTGTGTGTGTGTGTGTGTTTTTTTTTTTTTTGGGGGGGGGGGGGGGTGGGGTTTACCATGGTACAAAAGTTGTTAGGTAATTCTTTGTGAAAGTTTTGATAACTGATGCATTTACTTGCTAGTCCAGATACAACGGGGAAAATTGTTAGGATCACATGAAATGTAGTTTGATTGTCATGTTATGTTTTCTAGAAACCTTACATGTTAAATTTCTCAATTTGATAACAATAGAAAATTTCCATTCTTGTATATTTGTCTTTCAAATGGTCAAATGGTGACAATATCTTGGAAGTTGCATACATTTGTAGGCTTCATTTGGAACCCATAAATCTCAAAAATTCAGCAAGAGTGGATGTTTCCCACAAAATTGGTGGAACTTATGCATTCCTAACGTGCAAATATTTTTTTCCTGTTGTAAGACATAGGGCAAACATATAGATCGAAAAACAACAAGCAACTAAACCTGAACTACTACTAATACTCTTTGACGGAAAAACTATTCAGCTTTTCTATTATTCCCTTCTTCTGAGCTTTTCTAAAGAATGCTTATGATGGTGCATATCTTTGATTTTTCTTATAATTATTTCAGCAAGCTTGCTTATTTTTACGGCTATTATGTGGTGGATCGTTTTGTTGGACATGGGATTGGACCTATTTGGCATTCTGAGCCACTAATCCTACATCATGGTGAGTACGTTGATATTTCCCTGCTTTTGTGACCCAACTTATTATTTGAACAAAACTTTTGGGTAACAGTTTAGGAATTTACCTTACAATATTACTAAGTACATAGATTTCTGTTCTGGTATCCTAACAAGTTCTTTGTTCTGCTATGCTTTTGGTTAGGTGTGTAAGAACTAATTGCTTATAAACATAACTTTAGCCTATACATGATCACCGAGCTCTGCTAATGATTTCTTCTATTATGGTTTACATTTTCCCCATAAATTACCGTTTTGAAGCACTAGAAAACCAACAAGATGTTGTAGATCGCTTGACTTTATTTAAACTGAAAAATATGTAAAATTAAGAAAGAAGTTGTGTTCTAGCTAAGTCTGCCATTCCAAAGTGGTTGTATTGTAAGTTATAGCCAGGAGGACAGGGACAGTCTGTTTAGTTTCCATAGGACTGGACTGTTTACTTGTTATTAGGTATGTTTGCTTATGATTGATACTGCTGTTGGTTTAACAGTTCGTATTTATCTTAAGATGAATAATGTTGAAGTATTATTTTAATTATACCCCAGCAATTATGCTAAACTAATGCATGATGATAGAATCACACATTACATTAGACTAATGAACTATCACTTTTGTAGCCAATGACAACTCTGGGCGAATGGTTGAAGGTCAGACATTTACAATTGGTAAGTGTTTTCAACTATGTTTTGCTATATGTTTGGGTTTCCATCTTTAGGTATTTGTCATTGATGTACTTATGCTTGCACTCCTAGAAAGCCCTTGTTTTTTTTTGGTAGCAAGGTATTATATATATATAATTTGCAAATTCTTGATACTGTATCTTAAATTGGAAGCCATGGATCCCAACACTTCTCTTGTAATAACCCTGAAATTAAAATCAAGTATCTTGGTATGTGTTTTTTTTTGGCAGAACCTATTCTTACAATGGAAAAGGCTGAGACAGTTACATGGGAAGATGGATGGACTACTGTCACTGCCGATGGCAGCTGGGCTGCGCAGTTTAAGCATACTGTACTAGTCACTCGGACAGGGGCTGAAATACTGACAAAACTTTGACATCTTTATTATGATAAGAAGTTGTTGGGCCATTTACCTTGAGCATGTTTATGTTCATATAACAGCCCCAGCCCCCCGCTAGCAGCCGTATCCTACCGAAATGTCTCTTTGGTACTGACATTGCCACACATGAATTCTGCCCTAAAACGTTGGTGTTTTATGTGTACAATGCTCATCTGATACTTTTGATCCACTGCAGGTCCACATGTGGCAGGATTACAGATCACAGGCTGAAGAGCTGATCGATGAGATCTGTGATGAAAGTTCTGTACCAGGCGAGTGGCTTGTGCGAAGGGTTTGCGGATCCTTAGAATTTTGTGTGTGGCATACTGGCATATGATCAGTTACTGACGTATTGCTAGGCATGTAATGTGTAAATAGTCCTTAATTTGTTTTGTTTCCTCCTTAATACAACGCCGAATGCTGCAGTCGCTTGCATTGCTGTTGGTTTGCTTGACCTGCTGCAGCCTGTATACAAATTGCCAATGCCAAGCAGAATCCCCATCACGAATTCACGATGGGCTAGCAAGTGGAATAGTAGGAATAAATTCGCTGGAGGCCCCTCAACTTAACGACGAGATTTTTTGAGGTCCTTTAACCACAAAATTAGAAATGTGCAGTGGCGAATCTAGAACAAAAATTACCCGGGGTCCACTACATAGTAGTTATCTAATTATTCACTAGTATATTAATCAAAATAGCATAAATTAGTTAGAATTTAACAATTTTACCTAGCGTCCTGTGACACCGGTAAGTTATATGTGGGCACGCCACTGGAAATATGTACCCTTAAACTCAATCCGTGCACTCAAGGTCTTATGGTAGTATATATGGGTGGTTTGCTGACGTGACATCCTAGTTAGTAAAAAAATTAAAAAAAGTACGTGAGGACCCACATGTCAGTTGCATATCGTTTTTTTCTTCTCTTTTCACTCTTCTCTCCTCTTCTTCACTGAGGGAGGCCGATGGCGGGCGGAGCGGCGATGGGCGAGCGTGGATGCGGGCAGCGGGTGGAGAGTCGGCGGGCCTAGGAGGCTGGCGGCAAGCGAGCGTGGCAGCGGTCGACGGGTGGCGGGCTGCGGGAGGAGCGGGCGAGCGCGGCGGCGGTAGCGGGGCGCATGAGGCGGAGGCGGAGTACAGCGCGACCGACGAGGTCGAGGCGGGGCGTGGGTAGGTTGAGACCGAGGACGGCGCGGCCCGCGACATCGAAAACAAGAGCGAGAAGAAGGGAGGCGTGGGAATGGGCGAGCACGGCGGAGCTGAGGACGAGGACTGGGCGGCCGGCGAGGTCGAGACGGACGATGGCTGGTTCGCACCGCCGGCCGCCACCTTCGCCTCGTCTCCTCTCTCTCACCGTCTGTGCTGCTCGGGATAAGATGAGTCGAGGCGGCCGGCCGCCGCCCTTCCCCTCTCCAGAAGCATCTCCGGCGAGGAGTACGAGGACCTGATGCCAGTGATGACCGGGTGGCTGGGCGACCTGGCAAGCGGCACCATCACCGTGGAGAGCCCTGCGGTCGCCGGTCCCGTCCTTCTGGGTTGCCGCCACCACCGAGCACGACCATCCCAGTCGCAGGTACGCGCTCGCTGTAGCTCGACCGCAGGGAGCCCTGCCTCGCCACGACCTCGTCAAGCTCGTCGATGCATACCCCTCGGAGAGCCCTGCATCGCCCTCGGATGGGCTCCCTGGCCGCCTCCCCCTCCCTCCCAAACTCGCTAGCCTCCTCTCCCTCCTTTTCCTGCCTTCGCCTCCCGCGAAAGCCGATGCTCCATTGCGGGTAGCCGATGGTCGCGGTGCTCTGCACCGAGGGAGCGGCGGAGGTCTGTGCTGACGCCGGTTTGGGAAGAAAAGAGGAGATGGTAGCTGATATGTGAGCTCCATGTACTTTTTTAAATTTTTTTTTACTAACTAGGATGTCACGTTAACGAAACCACCCGCACGTAGAGTGTACAGTTTGTGTGAATTTAGTGGTATGTTAAGGGAACTCAGATAATCTCGCTGTCAAGTTAAGGAACCTCCGGTGAACTTATTCCTTTTCCCATTGGTAGCGACTAAATTCGTCCTGTCTTTATTAAGCCCACGGAATTATTCTCAGGCCCACCTTGGCCCACGCAGGTATGTGCCATAGTAACAATGTCACGTGAGACGTTAGATCGATTATCAACGGACATCCAAGTGAAGTCTTCGCCGGAATATTCCACAGCTGACTGCTCAGCTCGAGGCGGCGGACTACTACAGCTTACAAGGAGAGGGGCGGCGCAGAGCATCACCAACAGCAGACGTTTATATGGTTCCCAATCTCAGGTTTTAGGGGATTTTCGCTAAAAACGCAATCCAACATATTTCCTACTCGCATATCCCGATCTACGAGTTCCCTACTCCAGGATTTTCGGTCGCTCCCAATCGTCTAATCCAGCACATTCGCGCGCAGGAGGCGAAATGTTCCCATCCAGCTCATCATCTCCGCTCCCTCGTTCGCCGCGGGGTCGTTCCTCAGTTCCGCCGCCAGCGTCCTCTTCCGTGCAGGCGGCTGGAAAGCCTGGAATGCCGTCATCACTTCCCCCAAGCTTATTTGGCGTCAGCTTTCTTTCCGGGGGCGACGCATATGCTATCTGATTCCAAGCGTGAGCGCCGTCTCAATTCCGGCCGCCGCCTCGATTAAGCCTGAATCGGCCTGTCGCCCCAACAGCTGCTGCAGCTGTGAGATGCTGCTGAAATTTTGCAGCTGTGTGATGTTTGCTGTTTGCCGCAGCTGTCGCGGGGAGGGCGATTGGCGGCCGGGAGAGGGGCGAGAGGAAGCGGCGCTGCTTGGGTACCGCCAGGGGGAATCGCGATCACGCGAGCCGAATAAACGAAAAACCAAAAAAAAAAAGCAGAATAAACGAAAAAAATCTGTTGGTAGATTAACAGATTGGCCTAATTTTAATTTTTGGGAATTAAATTTACATATTATGTTAGAGAGATTAATATTTCTACTTCCTATTTTCAGTTTAAGAAACCGAAAACAACTTTTAGGAGGGAGATTATGGGAGAACTGTTGGTGATGAGCTGGGATTGCCGATGCGGATGCTTCCGTCGACCGCCGGCGGTGGCGGCGGAGGTTGTTCTGCTCCTCGATCGTCGGCCGCGCCGGTGCTTCTTTCCTTTTTCGCCGGGAGTCCGCGTCGGAGCCATGAGCAGTCCAGAAATTCAGAAGTTGGCAGACGAAGTGTGCAGTGCAGCAGCACAGTCAGTGCCTAGCGTCTGCTACTGCTCTGCATCATTTGTGGATCTTCGTCACATATGGTATGGGTATGAATTGGAGTATTGGACTATTGGAGAACGGAGACGAGCCATTGCAAGTTTGCAACGCAGCGCATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025778