BGIOSGA025780

From RiceWiki
Revision as of 06:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025780| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025780, complete gene.| tag = OsI_261...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025780

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025780, complete gene.

LocusTag

OsI_26158

Ensembl Transcript ID

BGIOSGA025780-TA

Ensembl Protein ID

BGIOSGA025780-PA

Length

6819

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17660959..17667777

Sequence Coding Region

17660959..17661102,17661203..17661312,17664814..17665084,17665194..17665296,17665468..17665813
,17666146..17666520,17666619..17666697,17667565..17667777

Genome Context

<gbrowseImage1> name=IndicaChromosome07:17660959..17667777 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:17660959..17667777 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGCAGGCAATGTCGTCGCCGCTGCTCTCTTCCTCTTCCTCGCCACGTCCGCCCTCCTCGTCGCCGGCGACGACCCGTACCGGTTCTTCACGTGGACGGTCACCTACGGCGACATCACCCCGCTCGGCGTCAAGCAGCAGGGGATCCTGATCAACGGGCAGTTCCCGGGGCCGACGATAGAGGCCGTCACCAACGACAACCTCATCATCAACGTCTTCAACAAGCTCAACGACCCATTCCTCATCTCCTGGAACGGGATACAGCAGCGGCGGAACTCGTTCGAGGACGGCGTGGCCGGGACGACGTGCCCGATCCCCCCCGGCGGCAACTTCACCTACATCCTGCAGGTGAAGGACCAGATCGGCACCTACTTCTACTTCCCCTCCCTCGCCTTCCACAAGGCCGCCGGCGGCTTCGGCGCCATCCGCGTCCTCAGCCGCCCCATGATCCCCGTCCCCTTCCCTCCCCCCGCCGCCGACTACCCCCTCCTCATCGGCGACTGGTACAAGGCCAACCACACCGACTTGAAGTACATGCTCGACAGCGGCAAGGCCCTCGGCTTCCCCGACGGCCTTCTCATCAATGGCCGGAGTTGGGACGGCTACACCTTCAACGTCCAACAAGGGAGGACGTACAGGTTCCGGATCTCGAACGTGGGGCTGTCGACGTCGCTGAACATCCGGTTCCAGGGGCACACGATGACGCTGGTGGAGGTGGAGGGGTCCCACACCATGCAGACCACCTACTCGTCGCTCGACGTCCACCTCGGCCAGTCCTACTCCGTGCTCCTCACCGCCGACCAGCCGGCCTACGACTACGCCGTCGTCGTCTCCACGCGCTTCACCTCCAAGATCATCTCCACCACCGCCGTCCTCCGCTACTCCGGCTCCGGCGGCAAGTCCCCCGCCGCACTCCCGGGCGGCCCCACCATCCAGATCGACTGGTCCCTCAACCAGGCCCGCTCCATCAGGTGGAACTTGACGGCGAGCGGGCCGCGGCCGAACCCGCAGGGGTCGTACCACTACGGGATGGTGACGACGACGAGGACGATCAGGCTGGCGAGCTCGTCGGCGACTGTGAACGGGAAGCAGAGGTACGCGGTGAACGGGGTGTCGCACGTGAACCCGGACACGCCGCTCAAGGTCGCCGACTACTACAAGATCGCCGGCGTGTTCTCTGTCGGGACCATCTCCGACAGCCCCTCCGGCGGCGGCGGCGGCGGCGCCTACCTCCAGACGGCGGTGATGGGGGCCAGCTACAGGGACTACGTCGAGATCGTGTTCGAGAACCCCGAGAACGAGGTGCAGTCGTGGCACATCGACGGCTACGCCTTCTGGGTCGTTGGAATGGATGGAGGGAAATGGTCATCAGCGAGCAGGCAAGGCTACAACCTGCGGGATGCCGTTTCGCGGTACACTGTTCAGGTTTACCCTAATTCATGGACTGCGATCTACATGCCATTGGACAACGTGGGCATGTGGAACGTCCGGTCGGAGAACTGGGCGAGGCAGTACCTCGGGCAGCAGTTCTACCTCCGCGTCTGGACGTCGTCGACGTCGTGGCGTGACGAGTACCCCATCCCCAAGAACGCCCTCCTCTGCGGCCGCGCCGCTGGTCGCCGGACACGGCCGCTCTGA</cdnaseq>

Protein Sequence

<aaseq>MAAGNVVAAALFLFLATSALLVAGDDPYRFFTWTVTYGDITPLGVKQQGILINGQFPGPTIEAVTNDNLIINVFNKLNDPFLISWNGIQQRRNSFEDGVAGTTCPIPPGGNFTYILQVKDQIGTYFYFPSLAFHKAAGGFGAIRVLSRPMIPVPFPPPAADYPLLIGDWYKANHTDLKYMLDSGKALGFPDGLLINGRSWDGYTFNVQQGRTYRFRISNVGLSTSLNIRFQGHTMTLVEVEGSHTMQTTYSSLDVHLGQSYSVLLTADQPAYDYAVVVSTRFTSKIISTTAVLRYSGSGGKSPAALPGGPTIQIDWSLNQARSIRWNLTASGPRPNPQGSYHYGMVTTTRTIRLASSSATVNGKQRYAVNGVSHVNPDTPLKVADYYKIAGVFSVGTISDSPSGGGGGGAYLQTAVMGASYRDYVEIVFENPENEVQSWHIDGYAFWVVGMDGGKWSSASRQGYNLRDAVSRYTVQVYPNSWTAIYMPLDNVGMWNVRSENWARQYLGQQFYLRVWTSSTSWRDEYPIPKNALLCGRAAGRRTRPL</aaseq>

Gene Sequence

<dnaseqindica>1..144#245..354#3856..4126#4236..4338#4510..4855#5188..5562#5661..5739#6607..6819#ATGGCAGCAGGCAATGTCGTCGCCGCTGCTCTCTTCCTCTTCCTCGCCACGTCCGCCCTCCTCGTCGCCGGCGACGACCCGTACCGGTTCTTCACGTGGACGGTCACCTACGGCGACATCACCCCGCTCGGCGTCAAGCAGCAGGTATGCGCGCGCGTGCATTGTTTCCGCCGGTTTTTTTCCATCGATTTACTGGCGCGCGCGGCCGTCTGATTATTCACTGGCGTTTGCGGCGAAAATGCAGGGGATCCTGATCAACGGGCAGTTCCCGGGGCCGACGATAGAGGCCGTCACCAACGACAACCTCATCATCAACGTCTTCAACAAGCTCAACGACCCATTCCTCATCTCCTGGTACGTATACTACTACCAGTACACTATACATGATGATGAACTGGCGTAACGTACGCACTTGATTCATTGCTCGTACATTAGTACGTATGTGTATATCTCCGTGGTACTATCAGTTCAACGGAATGCGTCGCAGTATATCTTACAGCAAGTACCATTGCCATGCAAAAATTTAATCAGCCCCCCAACAGCATCAATCCTAACAGCCAACTAAAATCCCTGTTTTTCTATAATATATAAACGATCTCTAACGACCACATAGCAAACTAGTACTACTAGCAACTCTGTCAGCAGTTAAATTAAACTTTTGCAGTCTGTTCTATTCCGTGTTTTGATGTGTTTAATCGCCCATGTTCTGCTACACTGTTTATTCGTAGTAGTAGTTAGTTTTCAGAGCAATCTCGTGAGTGCAGTGTGTAGTGTGTTGTGCTCTGCTCCCATGCAGTGAGCTTGCCACACACTGTACCTACCGACCCCTTTTAAAAACCGGACTTAATAAGCATTATCAAAGGGGGCTAACCCACATGCCCTACATAGATAGCAGAGTACACATGTGTATGTATAGTACATCGTCTCATTGGTTTAGCCTTACATTTCGTGACAGCTCATGTCATTAGGCCATTCGGATTGCGCAGGGCCAGGCTAAAATGAATGGAAGACTACTGATTCCCTGTACTGCTAAGCGTACTGTGTGATTCGGCTAGTGGACCAAAAGCCTCTTGTTAGTCTCGGTGACAGGTGGGCCCGCGCAGCGGACTGTGCCCTGGTCAGTCTGTTCGTTTGTCAACGAGAATTTTGCGTTAAAGAAACATATCTGATATAATCGACTCCAAGAAAATTATTGACAGTGGTGAGGGACACGAAGCAAATGTTTCCCAAGCGAATAAACGCGTCTCCAAGTGAGGCAGGTAGGATTAGGAGTGAAGTGCGCAGCAAGCACGCACATGACCACTACATGAGACAACAGAAGGCAGTGATGCAGCAGAGTAATCGCAGATAGCTCCAAATTTCGGTGCGCGCAGATCAGATCTAGGAGAAGCACCATATCCATTCCTTTTTCCCGCCCTTTTTTGAGTTTTTTTTTTTTTGCATCTTCCACATTCACAGATAAGGGAATAATGAGCAGTCGAGCACGAGGGGGGCAAAGCTCAAGTACGCCGCGTCCCGTGATCCACACTGAGCAGCCACGAGCCCACGATCCTCGCGCGCGCGGCCGCGCGTTATCCTATCGCGTACTCCATTCGCGTGCGCTTTACTTCCCCCGCGCCCGCGCCATGTGCCGCTTCCGTGCGGCGGGTTTCCGTGGGAGCCAGCCTAGCCGACACGAGACGATGCGGGCGTAGCGCGGCGCGGCCGCTAGGGCCAGGCCCCGCAGATTCGCCGCGCGCGCGGGCGTGTGACCGAAAAGGTGTGGCAGCTCGGTCACGGGCCCTCCTGTTGAACTCGTAAAAAACGCCGGCCCCCCCCCCCCCCCAAAAAAAAATAAAAAGAAAGAAAAGTAGTGTGCTTCGACTGATGGTTTAAGAGGGGAGCGAGCAGAAAAGCTGTCGTTTTTCGCGGTGTCGGTGGAAGGAAGGGCGGCTAGCCAAAACAGTGGCCATGCAGCGGAGGGAGACTGCGAGCTTGGGTTACTACTCCCTCCGTTTCGTTTTATTTGACACCGTTGACTTTTTAGCACATATTTGACCGCTCGTCTTATTAAAAATTTTAAATAATTATTAATTCTTTTTCTATCATTTGATTCATTGTTAAATATATTTTTATGCATACATATAGTTTTACATATTTTATAAAAGTTTTTGAATAAGACGAACGGTCAAACATGTGCTAAAAAGTCAAGGGTGTCAAATAAAACGAAACGGAGGGAGTACTTACTAGAGGCGAGGGGCACACGGGACTACGGGAGCAGTAGTTGCACGCGTCGTTGCGTGACGGCGACGTGCTACGTGAAGTGCGTTCAATACGTCGCGCTAGCTGCCCGCGCATGTGCTTGGCCGCGCGCGCGTGACGCGTCGTGACACACTGACACCGTAGCACGACCGACGCCGCAGCACACGCAAGAGATCGATCGATACGGTCGACACGGAAATGATGATACGTACGTTCGGCCCTGCCCGACCCGGCCCCGGCGTCGTCTTTGAATAGGCGACGGGGATCGGAGACGTGAATTGAATGCAAAGAGAGTGACTCGTCAGTGCATGACGTCAAAAATTATTAGAAAAGATTAAAAATGTTATCAAGATAGATCATGATCTATCTTTTCACAAACGTGCGAGTAAAAATTCAACTTATACAATTTGAAACAAAAATAATAAATTTAACTGTGAATTATGTGTTTTATTCATAGTCAAATTTATTATTTTTATTTATACTTGTATAAGCCAAATTTGATTTTGCATATTTGTGAAGTGACATATCATATATTGATCTATCCTACTAAATTTTTTAATTTTTTTTGTTAACTTTTAACTGACATGTAAAAATAAGAGAAGATATCCTTATAAGCGATGAATTGAGTTTTCTCAAAGAGAGCTAATCTAGCATGGGGTCTTTTGCTCGATGATCATGCACGGTCGCAACGTCGTCTGTCACACCATGAGACTTATCAATCTGCGTGCGGCCGGTGAAATTAGTACGTCTAGCTAGGCGGCATTCCAATTAAACCGGAGGTTACATTTTAGGGGGCGATCAAGTTGAAAAATGCCAATTTTCTCGTCGAAAGTACATTGATGTACAACTGCAAACCTGTACATGTGTGTAAATATAGTATGCAGGAGAAGTGTACGTGTATACGACAATGGCGCAGATAAGAGAACGTGCCAACTCCATGCATGGACGGCGGCATGTGTGTCCTCGTGACCACGACGACTACGAGGTCGCTGTCACAGCTGAGATAGTGCCATGGACAGATTATATGCAAAACAGTCCATTAATCAATGACCAACAAGAGAGCCCCTAGCTTGCAATGAAACACATTGATTGTTGAAACTACTAAACAATTTTTTTTAAAACAAACACTACTCCCTTACAATTAAATTTTTTTAGAAGAGAGGAAGTATATCTACTAATTAAGCAGTAAATAAAATCAAACCACTGCACAAGGTCCAGTTTGAGTTCGTTTGCAGTTCTACCTTTTTAATTTAGACACCGTTTTGCCTGAGCAAAATCACTATCCATGCAGAATCTGTCATTCTCCCATTCACAAATCATGTTGAGTCGAACCATCAAATTTTGCAGAGACAACGGCATATATACATGCTCGCCACTATATATGAATTGCATGTGTTCACTAGCGACGACGCCGTTTTAGTTTCCTTCTCAAAAAAAAAAAAAACTTTTACATGTTCTTGATGACTCTGGCGTTTCCTGCTTTCGAACTTGTAATCGTGCACAGCCACATGCTGATTCGTTAAAAAGGAAAATTCCTGTAATGGTGGTACGTACTGCACCATGAATGAATGAACTGAAGAACTGATGGATTGTGAATTGGCCGGATGATGGAAGGAACGGGATACAGCAGCGGCGGAACTCGTTCGAGGACGGCGTGGCCGGGACGACGTGCCCGATCCCCCCCGGCGGCAACTTCACCTACATCCTGCAGGTGAAGGACCAGATCGGCACCTACTTCTACTTCCCCTCCCTCGCCTTCCACAAGGCCGCCGGCGGCTTCGGCGCCATCCGCGTCCTCAGCCGCCCCATGATCCCCGTCCCCTTCCCTCCCCCCGCCGCCGACTACCCCCTCCTCATCGGCGACTGGTACAAGGCCAACCACACCGTACGTCTCATCCCATCATATCCCACGCCAATTCATTTCTTGAAATGTGTTTGCAATCTGATTAATTCAGAGACTGATCGAGATCAGCATCTTGTAATAAATTGTACAGGACTTGAAGTACATGCTCGACAGCGGCAAGGCCCTCGGCTTCCCCGACGGCCTTCTCATCAATGGCCGGAGTTGGGACGGCTACACCTTCAACGTCCAACAAGGCAAGTAGAGAATTCTCACCTTCTGAATCATCGAGTTGAAATACAAGGGCTCATTTCGTTTGGAACACACGAATTTTACAGTATTTTCACAGGAAACAGTTCAGTTCCCATGAATTTTCTTCAGAATCCCATGTTTCAGCAAAATTTTCGTGCTGAAAACAAAAAATGCAGGGAGGACGTACAGGTTCCGGATCTCGAACGTGGGGCTGTCGACGTCGCTGAACATCCGGTTCCAGGGGCACACGATGACGCTGGTGGAGGTGGAGGGGTCCCACACCATGCAGACCACCTACTCGTCGCTCGACGTCCACCTCGGCCAGTCCTACTCCGTGCTCCTCACCGCCGACCAGCCGGCCTACGACTACGCCGTCGTCGTCTCCACGCGCTTCACCTCCAAGATCATCTCCACCACCGCCGTCCTCCGCTACTCCGGCTCCGGCGGCAAGTCCCCCGCCGCACTCCCGGGCGGCCCCACCATCCAGATCGACTGGTCCCTCAACCAGGCCCGCTCCATCAGGTCAGTGACAGTGGCTTGAGCGCAGCGTTTTAAATCTCTGGCTATAGCTACTGCTATCTCCTAAAATAGTCGTTTACTATCTCCTAAAATAGTCGTTTACTTTCATGTACTCCTGTCATCTTATAAAAAACTAATCTAGAACTGGATGTGTCGACACATATTAGTACAACAAATCTAGACATATAGGATGTGTCACATCCAGTTCTAGATTTATTTTTTTGAGTTGGAGGGAGTACAATTTAGTCACTATTAGCAGCTATAATCTTATTTAGTTTGTTATGACCTGTTTGAGAAGGGTTACCACTGAATGTCTTGGCCCGCTATTTGCACAGGTGGAACTTGACGGCGAGCGGGCCGCGGCCGAACCCGCAGGGGTCGTACCACTACGGGATGGTGACGACGACGAGGACGATCAGGCTGGCGAGCTCGTCGGCGACTGTGAACGGGAAGCAGAGGTACGCGGTGAACGGGGTGTCGCACGTGAACCCGGACACGCCGCTCAAGGTCGCCGACTACTACAAGATCGCCGGCGTGTTCTCTGTCGGGACCATCTCCGACAGCCCCTCCGGCGGCGGCGGCGGCGGCGCCTACCTCCAGACGGCGGTGATGGGGGCCAGCTACAGGGACTACGTCGAGATCGTGTTCGAGAACCCCGAGAACGAGGTGCAGTCGTGGCACATCGACGGCTACGCCTTCTGGGTCGTTGGGTATGCACGGAATCGTTTTCGCTCTCTTCATGAATTTTTAGAAGTGTTTGTAAATTTGATTTCTGTTTGATCTGAATGAGTTTGGAATTTGTGAGCAGAATGGATGGAGGGAAATGGTCATCAGCGAGCAGGCAAGGCTACAACCTGCGGGATGCCGTTTCGCGGTACACTGTTCAGGTATGGGTGCTGTGTTTTTACTGATTTGTTCTGAATATGCTAGTGCCTTGAACTGAAACTGGAATTGATTTGCATCTTTGAATTTTGAACTAACTGAGAAGTCGAGTGGAAATGTCCAAACGATAGTGATAGTTTGAGTTGAATAGTCAATACTGGATACCACAGAAGTGTGGTTGAAACGGGGTTTATGGTTCAGTCAATTCAGGTTAACTTGAATCAGAATTTACTGAAGTTAGGCCGTCCAAGTGAATGTTCCTTTCTCAAATCCACCACAAAATGTGCCTGAAGAAATGTTTTTCAACTCAATAAATCCCTATTCTAAAGAAGCAGTGCAATCTTGAACACAAAGTGAATGTTCCTTTTAGCATGGCATTGATTATTCCAACTTGCGCATTTGGCCCGGCGTGTTGGATAAGCTCTCGCCAGTGCCCTTTCAGAAAACGATGTATTAGTGATCGATCTCCATCAGGGAAGTCATAGTGCCGCACTCACAAGCTTTGGGGAGTCCTTTCACCACATTTCACTATCTTACTCTCCTTTCTAGAACTTCTCTTTCTTGAAAAATAGAACTAAAAATATTTCAAGCCAAGAAAGTCTTCCATATTCTTTTTTAGATAATCTGAAGATAATGAAATTCTTCCATTTCTACATTGCTATCCTTTAAGTGTACTAGTATTTTTCATCTTGCTGAAGTATCTACCTTTCAAGCATTTTTTCTGAGCATTGTCAGTTCATTTTTCATTGCCATCTCTGGTGCAAAACTTGAGAACAGCTATGAAATATAACAAACAAACAAACACATCTCTGTCCCTTGTTTTGTGCAGTGATCATCATGATCTCACACACAAACTCTGTTTATTCCATCAGGTTTACCCTAATTCATGGACTGCGATCTACATGCCATTGGACAACGTGGGCATGTGGAACGTCCGGTCGGAGAACTGGGCGAGGCAGTACCTCGGGCAGCAGTTCTACCTCCGCGTCTGGACGTCGTCGACGTCGTGGCGTGACGAGTACCCCATCCCCAAGAACGCCCTCCTCTGCGGCCGCGCCGCTGGTCGCCGGACACGGCCGCTCTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025780