BGIOSGA025781

From RiceWiki
Revision as of 06:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025781| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025781, complete gene.| tag = P0409B1...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025781

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025781, complete gene.

LocusTag

P0409B11.37

Ensembl Transcript ID

BGIOSGA025781-TA

Ensembl Protein ID

BGIOSGA025781-PA

Length

4070

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17670168..17674237

Sequence Coding Region

17670168..17670318,17670431..17670531,17671160..17671281,17671529..17671716,17671804..17671982
,17672174..17672515,17672599..17672663,17672942..17672990,17673066..17673210
,17673291..17673378,17673458..17673527,17673658..17673798,17673878..17674237

Genome Context

<gbrowseImage1> name=IndicaChromosome07:17670168..17674237 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:17670168..17674237 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCACCAGCTTCCTTCCCCCGCCCCCTCCTCCGCCTCCTCCTCGCCGTCGACGACGACGGCGACGACCACGTCGCTCGTGTCGCGCGCCCGCACCGCGATCCACTCCGCCGCCGCCCGCGTCCTCACCGACATCAAGGCCGACCTCCGAGATGCGGACGGATCCGGGGCGCTCAGGGCGCCGTCCCCGCGGCCATCGGCGGATCGGCACCCCGACTCCATCGCCGCCGTCGTGGGTTCGCCGCGAGACGAGGCCCCAGATATAATCTCCTCCCCAGATGGGGATACCTCAAATATTGAACCTGACTCAACTTCTTCAACAAAGATGGCCTTTCCTTCAGTTTCAGTGGTTAAGCAGCTGGTTGCTGCCATTGACAACGGTAAAAATTTCAAGTCAATGAATGATATGAGGTCTAATGGAGACCAATTACTGAAAGAGAAGGGGGGCTTGAGCTTATCTGTTGTCAAATCACTTGTTCGGCGTGAAAAGGATGAAAGATCGAGTTCTGAATTTGTTGGCGATGATGAAACACAATCTTTGATGTACACATTGTTCAAATTAGAGGAGCATTTTCCCCATGACAAAAGTCAATGCAACTCAGAGTTGCATCACTCAATATCTTTGCCCAAGGATCTACACGGTGCACCACCTGGAAGTTTCACTCATCAAATAGCAGAGACTATTGGCAAAATAAGTTCTGTATACAAAATGGCGTTCTTTTGGCAATCCCTAGTTCTCGAGTTGAAGAAACTATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCTGCTCCAGACTTGAATTGTTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATTGCCAGGAAAAAACGGAGAAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCAAGTATTGATAACTCCAATCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTATATAAAAGGTAGTGCTGGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAACTTAACGTTGTTGGAAACTGGTGAGCTCGTATATTCTCCAACTCTGCAGGAAGGTCCCATTATGACAGCAGAGCTTATAAAAGAAACAGAAGAACTTGTCTTAAGGACTGGAAGTGTTGGTGCTGGGTGTTCTCAACTTCTATCAGATATGCAAGCCTTCAAGGCCGCAAATCCAGGGTGTGTCCTGGAAGACTTCATTAGATGGCACTCTCCACCTGATTGGTCTGAAGATTGTGCAGCAAGCAGCGCAGAAGTTGGGGAGGGCTCATCTAGACGAGGTCGATTAAGTGAGAGAATGCAAACAAAAGAAGGGAACTTGTGGAAGGAATTATGGGGGGCTGCAAAACCAATACCTGCTGTTGAACAGGCGCCTATATATGATGAAGATTTAGCTGTGGAGAGCATTTTTGATGCCTTGGAAGTTATTGAACCGTCAAAACTTTTTGAGCAGCTACTAGCTGTCATTCTTTCTGTATGCTTTGTAGCAGCAGAATTGGTGCTACCAGCAGGTAGCAACTTGTCGAAATTATTCTACGACTGTAAAGATTACATACTCAGCATTTACCAAGATGACATATCAAAAGAGAAGCTAGATGAGATATGCAAGGTCTACGAGACGATGGAAGCCATAGTAACTCACCCTGAAGAAACTCTTCAGATAATGGAGGCACCTGATGAAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTCAACTTTATCGGCAAAGATCGCCATCCACTGTGGAAGCGTGCACCAAAGGAGGAGAAAAAATCATCACCGAAAGACGAGAAAAGATCGTCAGAGGAAAGGAGCACGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAG</cdnaseq>

Protein Sequence

<aaseq>MHQLPSPAPSSASSSPSTTTATTTSLVSRARTAIHSAAARVLTDIKADLRDADGSGALRAPSPRPSADRHPDSIAAVVGSPRDEAPDIISSPDGDTSNIEPDSTSSTKMAFPSVSVVKQLVAAIDNGKNFKSMNDMRSNGDQLLKEKGGLSLSVVKSLVRREKDERSSSEFVGDDETQSLMYTLFKLEEHFPHDKSQCNSELHHSISLPKDLHGAPPGSFTHQIAETIGKISSVYKMAFFWQSLVLELKKLWSDGQPVPRMPLDAAPDLNCCLLHQEIQVINCCIARKKRRKAAKESLDSLLKRASIDNSNHLYSNGDSPDSEMYIKGSAGDNVLRLGADHPSENLTLLETGELVYSPTLQEGPIMTAELIKETEELVLRTGSVGAGCSQLLSDMQAFKAANPGCVLEDFIRWHSPPDWSEDCAASSAEVGEGSSRRGRLSERMQTKEGNLWKELWGAAKPIPAVEQAPIYDEDLAVESIFDALEVIEPSKLFEQLLAVILSVCFVAAELVLPAGSNLSKLFYDCKDYILSIYQDDISKEKLDEICKVYETMEAIVTHPEETLQIMEAPDEKSPLESKNRFKIKLNFIGKDRHPLWKRAPKEEKKSSPKDEKRSSEERSTKIFSNLLDKKVSIFSKKNAKPTTEVPPPPPPSSAPGPFDDSEWTIL</aaseq>

Gene Sequence

<dnaseqindica>1..151#264..364#993..1114#1362..1549#1637..1815#2007..2348#2432..2496#2775..2823#2899..3043#3124..3211#3291..3360#3491..3631#3711..4070#ATGCACCAGCTTCCTTCCCCCGCCCCCTCCTCCGCCTCCTCCTCGCCGTCGACGACGACGGCGACGACCACGTCGCTCGTGTCGCGCGCCCGCACCGCGATCCACTCCGCCGCCGCCCGCGTCCTCACCGACATCAAGGCCGACCTCCGAGGTACGTGCGCTTGCGCCCGCCCTACGCCGCCGCCGCCGCTGCGCTCTACGTCGGTTTTGTTGGTGTTTGGAATCTGACGGCATCCGGCCGGGATCGGCCGCGGCGCGTGCAGATGCGGACGGATCCGGGGCGCTCAGGGCGCCGTCCCCGCGGCCATCGGCGGATCGGCACCCCGACTCCATCGCCGCCGTCGTGGGTTCGCCGCGAGACGAGGTACGCGGGTTAGCGAGTTGGGTTGGTGATGCGTGGTGGTGGATGGCGAGGCTGTGAGTTCGTCGGTGATAGGGGGTGGTGAACTGATTAGTTCCTGATGGAGTTGCTCGCGTTTCGACGATGACGAGTTATTGGTTTTGACCGTGCGTGGCTCTGTACTGGTAGTTCAAGTAAACAGTGTCGCTGTTCTGAATTGGGGCAGCTTTGGCGGGTAGAAATGGTCAGACAGTTCAGTTAGCAGCAGTAACTTTGGTTTGATGAGCTTTCCGAATGAACCATCCAGTAAATATCTAAAATGGTTCTTACACTGAGATTCCACGAGACTGTGTTTTTAGACCTTGTGGATAAGGTTGGGTTTTTTCATCGCAGTTCTAGTGGATCTGTCGGCTCTAAAATAGTAAATTGTGGAGTTTGCGAGAGTAATAAGTGGGCGATTCTGTTATGGCTCTATAATTAGCATCTGATATTTGATCCACCTAGAAAGTCTTTTTTTTTGGTTAATGCTTACCATCCAATCTTGTGAACTTTCCCGTATACATGCAAGTTACATGCTAAGAGCCTGAAACTGCTAAAGAAAATCTTTCTTGCTTTCATAGGCTATATAAATATATATAAAATCTTTCTTCAGGCCCCAGATATAATCTCCTCCCCAGATGGGGATACCTCAAATATTGAACCTGACTCAACTTCTTCAACAAAGATGGCCTTTCCTTCAGTTTCAGTGGTTAAGCAGCTGGTTGCTGCCATTGAGTAAGTTTTCTCCTTAGCATATGTTATCCAGCATTTCGATTGGCCCCATATATTATCAATAATTAATATTAATAAGGCACAAACTGCATTGCACCAATAATGCCTGCATCATATTGCATTTGCACTTGTGATCAAATTTTTATTCAAGTGATTTGTTGTTATTATTATTATTATTATTATTATTATTATTATTTTTTGGACTGTATGCACGATATATGTACAAACAATGTATTCTGTGCTCTTGTAGCAACGGTAAAAATTTCAAGTCAATGAATGATATGAGGTCTAATGGAGACCAATTACTGAAAGAGAAGGGGGGCTTGAGCTTATCTGTTGTCAAATCACTTGTTCGGCGTGAAAAGGATGAAAGATCGAGTTCTGAATTTGTTGGCGATGATGAAACACAATCTTTGATGTACACATTGTTCAAATTAGGTATGTTTTCGCTTTGTGTTCTCAGGATGTTTGCTTTAACTGTGGCTATTCTGGCATTTGAATTATGATATATACTTGTCTTTTCAGAGGAGCATTTTCCCCATGACAAAAGTCAATGCAACTCAGAGTTGCATCACTCAATATCTTTGCCCAAGGATCTACACGGTGCACCACCTGGAAGTTTCACTCATCAAATAGCAGAGACTATTGGCAAAATAAGTTCTGTATACAAAATGGCGTTCTTTTGGCAATCCCTAGTTCTCGAGGTGAGAGTTTGTTGATAAAATGCCCTTGTTAAGAAATTGTTCCTTGGAAGTGATGTATACTTGCAATACAAAGATGTTAAGACACATGAGGTCATTACAGGAAGACCTGAAGTGAACTTGATCTGAGTGACTAGATATGAACAATCATAGCTAATATGAAGCACCATATTTATTTATTTTAATTAATGCAGTTGAAGAAACTATGGTCCGATGGGCAACCGGTGCCTCGAATGCCACTGGATGCTGCTCCAGACTTGAATTGTTGTTTACTGCATCAAGAGATACAAGTTATAAATTGCTGCATTGCCAGGAAAAAACGGAGAAAAGCCGCCAAGGAATCACTGGATTCATTGTTAAAACGTGCAAGTATTGATAACTCCAATCACTTGTATTCAAATGGGGACTCTCCTGACAGCGAGATGTATATAAAAGGTAGTGCTGGTGACAATGTTCTTCGGCTTGGTGCTGATCATCCATCAGAGAACTTAACGTTGTTGGAAACTGGTGAGCTCGTATATTCTCCAACTCTGCAGGTAAGCTGTTGCTTTCTCTGTTTCTTTTTTCAGGGAAGCTTTCTTTTACAATGAATCTGAGTACCTGTCAAATCTATATTCAGGAAGGTCCCATTATGACAGCAGAGCTTATAAAAGAAACAGAAGAACTTGTCTTAAGGACTGGAAGGTATTCCAAGCTTTCTTATGTACCATTGTACTGCTAGCATGTATGATGTCAACCTTTCTTATATTTACTTGCTTTGGCAATCATTTGATACTGATCGCATCCAAGCACTTAATTTCAGTTTTAGTTAGGTATCAATAATCACTTTCTTTTGCAAATATGATCCTTCTTGAAAGGTGCATCACAGTCATATACCTTAATATCAATCCGCTATTATTTTATTTTTTTTAATTTAAGTGATAGAGCAATGGTTGTGATGCTGTTTGTATTTATATTCTCAGTGTTGGTGCTGGGTGTTCTCAACTTCTATCAGATATGCAAGCCTTCAAGGCAAGTTTAAAGCTGCTTTCTCATAGGCTGTGGCTGCTATAACTTTCTAAACAAGAAGTTTTTTCTTCTTAACAGGCCGCAAATCCAGGGTGTGTCCTGGAAGACTTCATTAGATGGCACTCTCCACCTGATTGGTCTGAAGATTGTGCAGCAAGCAGCGCAGAAGTTGGGGAGGGCTCATCTAGACGAGGTCGATTAAGTGAGAGAATGCAAACAAAAGGTGATACCTCTCTCTCTCTCTCTCTCTCTCTCTCATGTAACCTAAATGTCTTGTTCATTTGATGTGCTTTGGTTATCTAGAAGGGAACTTGTGGAAGGAATTATGGGGGGCTGCAAAACCAATACCTGCTGTTGAACAGGCGCCTATATATGATGAAGATTTAGCTGTGTAAGTAGGAATATTTACTGATGATTTTTTTTGTACAGGATGTTACTTTTAATTAAAATGGAGCAATCTATTCTTGCAGGGAGAGCATTTTTGATGCCTTGGAAGTTATTGAACCGTCAAAACTTTTTGAGCAGCTACTAGCTGTCATTGTAAGTTCAAAGTTTCTTTATTTTTTTTTTGTTGCAGAAAGCTATTAGCTGGCTAATTACTTTACAAGTTACATCCTATTTATATCAAGACAAATGTAATGCCTTACCACATGCTATCTGTGGATACCAGCTTTCTGTATGCTTTGTAGCAGCAGAATTGGTGCTACCAGCAGGTAGCAACTTGTCGAAATTATTCTACGACTGTAAAGATTACATACTCAGCATTTACCAAGATGACATATCAAAAGAGAAGCTAGATGAGATATGCAAGGTATTGTGATTTTGTTTAATCTAACCCAGATTTGTGTTACCATGTAATAATATAGTGAAACATATGGACACCACTCCAGGTCTACGAGACGATGGAAGCCATAGTAACTCACCCTGAAGAAACTCTTCAGATAATGGAGGCACCTGATGAAAAGTCCCCCCTTGAGAGTAAAAACCGGTTCAAGATCAAGCTCAACTTTATCGGCAAAGATCGCCATCCACTGTGGAAGCGTGCACCAAAGGAGGAGAAAAAATCATCACCGAAAGACGAGAAAAGATCGTCAGAGGAAAGGAGCACGAAAATTTTCTCAAACCTTCTTGACAAGAAGGTTTCCATATTCTCCAAGAAGAATGCAAAACCAACAACAGAGGTACCGCCACCACCTCCCCCTTCATCTGCCCCTGGACCATTCGATGATAGTGAGTGGACGATTTTGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025781