BGIOSGA025802

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Revision as of 06:34, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025802| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025802, complete gene.| tag = P0048D0...")
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Gene Name

BGIOSGA025802

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025802, complete gene.

LocusTag

P0048D08.129

Ensembl Transcript ID

BGIOSGA025802-TA

Ensembl Protein ID

BGIOSGA025802-PA

Length

5888

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:17953551..17959438

Sequence Coding Region

17953551..17953744,17953820..17954021,17954103..17954189,17954274..17954401,17954533..17954629
,17954843..17954920,17955016..17955241,17955461..17955684,17957187..17957213
,17957977..17958063,17958172..17958299,17958397..17958493,17958762..17958987
,17959087..17959310,17959409..17959438

Genome Context

<gbrowseImage1> name=IndicaChromosome07:17953551..17959438 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:17953551..17959438 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGTCACCATTTACTGGTGCAGCAGGCAAAAAGTTGCATGGAGCGCTACAGGCTGTACACTTTTGATTTCCCTGCTGTTCTTTTTCTCTGATTCACCGCATAGGATCCTCTTGAACAAGAAACCTCTCAATTTCAAAACAGCACCATCTAGGTTATTGCATGAGATTAGCATCAGTTCAAGTCGTGTTCAGAGGGTTAACAATTCATCCGCGGAGTTTGTTGCAAACCTGAATGACCGTAATGTAGAAATTGTACAACATATGGAAGACAACGATCATAACATCATCAATGCAACTGCAAATGTGACTTCTGACTGGAGCATTGTCAAGGAGGAATTCACATTTCCAGCTGGAAGTGCCCCTTTCAATAGCTGCCATGCTTCTACTATTGTAGAGACTGAGAAGGATAGTTTTTTGGTGGCTTATTTCGGTGGATCCAAGGAAGGTGCTCCTGATGTGAAGATCTGGCTGCAGAGATACAGTGATGGCTGCTGGCATACTCCACAAGTGGCTGATGAACAGGATGAGGTACCTATGTGGAATCCTGTTCTGTTTCAGCTCCCTTCTCATGAGCTTCTTCTCTTCTACAAGATTGGCCAAGAAGTTCAGAAGTGGAGTGGTGCCATGAAAAGATCTCTAGATGGAGGAAAAACCTGGTCGGCAAGAGAACAGCTACCACCTGGCATCCTTGGTCCTATTAAGAATAAGCCTTTCTTGGTTGAAGATGGGCGCTTGCTATGTGGGTCATCTGTTGAAAGCTGGAACTCTTGGGGTGCATGGCTTGAGGTCACAAAAGATGCCGGACGAACATGGCGGAAGTATGGCCCTATATATATTGAAGGCGAAACACTAGGGGTGATCCAGCCAGTTCCCTACATGACTGCCAATGGGACTATTCGAGTGTTGCTGCGATCTTTTGAGACAATTGGTCGTGTCTGCATGGCTGATTCTGCTGATGGGGGTGTAACATGGAGTTATGTGCACGAGACTGACCTTCCTAACCCAAACTCTGGGATTGATGGAGTTAAGATGAAGGATGGGAGAGTACTCCTTGCTTACAACACCTTCTCCAGAGGAACACTAAAAGTTGCAGTCTCCATGGATGATGGTGATTCATGGAACGATGTAATGGCATTGGAAGATACTGAAGGCATGGAGTTTTCATATCCTGCAGTGATCCAGACCATGGATGATCTCATACATATCACGTACACATACAACCGGACACAAATTAAGTTTGACCTGCCTACTCTCAGCTCTCAGGTTCAGAAGAATATGTTTCTGGTGGCCTACTTTGGGGGAACACAGGAAGGTGCTGACGATGTTAAAATTTGGCTACAGAGATATTACAATGGCTCGTGGCACTCTCCTGAAGTAGTTGATGAAGTGCCCAATGTTCCTCTGTGGAACCCTGTTCTCTTCCAGCTTCCTTCTGGTGAGATCCTCCTTTTCTACAAGGTTGGCAAGACTGTCGAAAGTTGGAGTGGATGCATGAAATGCTCATCGGATGGTGGTGTTATCTGGTCAAAGAGAGAGCAACTCCCACCTGGTATCCTTGGCCCTATCAAGAACAAGGTCACCAAGGACCATGGTAAAACATGGAAGAAGTATGGCCCGATTTACGTAAGAGGAAAAACCATGGGAGTGATTCAGCCAGTCCTCTACCAGACCAGCAGTGGCACAATCCGCATGCTGCTGCGCCCGTCCGATGAAGTAGGTCGCATCTGCGTTGCGGAGTCCAAGGATTCTGGTGTCAACTGGAGCTATGCGCAACCAACCGAGCTCCCAAACCCCAATTCTGGTATCGATGGCGTTAAGCTCAAGGATGGGAGGGTGGTGCTGGTATACAACAGCACCTCAAGAGGGGTGCTCAAGGTTGCTGTTTCTCAGGATGACGGCGACAAATGGGAGGATGTGCTGACACTGGAGGAGACCCATGGTGTGGAGTTCTCATACCCTGCTGTAATTCAGACTTCTGATGGGCTGGTTCATGTGACATACACATACAAAAGGACTCAAATCAAGCATGTCGTTCTACAACCAAGCGAGGTTTGA</cdnaseq>

Protein Sequence

<aaseq>MVTIYWCSRQKVAWSATGCTLLISLLFFFSDSPHRILLNKKPLNFKTAPSRLLHEISISSSRVQRVNNSSAEFVANLNDRNVEIVQHMEDNDHNIINATANVTSDWSIVKEEFTFPAGSAPFNSCHASTIVETEKDSFLVAYFGGSKEGAPDVKIWLQRYSDGCWHTPQVADEQDEVPMWNPVLFQLPSHELLLFYKIGQEVQKWSGAMKRSLDGGKTWSAREQLPPGILGPIKNKPFLVEDGRLLCGSSVESWNSWGAWLEVTKDAGRTWRKYGPIYIEGETLGVIQPVPYMTANGTIRVLLRSFETIGRVCMADSADGGVTWSYVHETDLPNPNSGIDGVKMKDGRVLLAYNTFSRGTLKVAVSMDDGDSWNDVMALEDTEGMEFSYPAVIQTMDDLIHITYTYNRTQIKFDLPTLSSQVQKNMFLVAYFGGTQEGADDVKIWLQRYYNGSWHSPEVVDEVPNVPLWNPVLFQLPSGEILLFYKVGKTVESWSGCMKCSSDGGVIWSKREQLPPGILGPIKNKVTKDHGKTWKKYGPIYVRGKTMGVIQPVLYQTSSGTIRMLLRPSDEVGRICVAESKDSGVNWSYAQPTELPNPNSGIDGVKLKDGRVVLVYNSTSRGVLKVAVSQDDGDKWEDVLTLEETHGVEFSYPAVIQTSDGLVHVTYTYKRTQIKHVVLQPSEV</aaseq>

Gene Sequence

<dnaseqindica>1..194#270..471#553..639#724..851#983..1079#1293..1370#1466..1691#1911..2134#3637..3663#4427..4513#4622..4749#4847..4943#5212..5437#5537..5760#5859..5888#ATGGTCACCATTTACTGGTGCAGCAGGCAAAAAGTTGCATGGAGCGCTACAGGCTGTACACTTTTGATTTCCCTGCTGTTCTTTTTCTCTGATTCACCGCATAGGATCCTCTTGAACAAGAAACCTCTCAATTTCAAAACAGCACCATCTAGGTTATTGCATGAGATTAGCATCAGTTCAAGTCGTGTTCAGAGGTAAGTTCTAAATTGAGTTTCTGTAGCCTCGTGAAGGATTACTACCCAGAGTTCTAATCTTTTGTGTTTAAAAAGGGTTAACAATTCATCCGCGGAGTTTGTTGCAAACCTGAATGACCGTAATGTAGAAATTGTACAACATATGGAAGACAACGATCATAACATCATCAATGCAACTGCAAATGTGACTTCTGACTGGAGCATTGTCAAGGAGGAATTCACATTTCCAGCTGGAAGTGCCCCTTTCAATAGCTGCCATGCTTCTACTATTGTAGAGGTATATGACTTCTGGATACAAGTTTATTTTGGGTAAAAATGTACTATAAGTTACTTATAGATTAATTTTGTCTTTTTTTAGACTGAGAAGGATAGTTTTTTGGTGGCTTATTTCGGTGGATCCAAGGAAGGTGCTCCTGATGTGAAGATCTGGCTGCAGAGATACAGTGTGGGTTCGATCATCCGGGATACTTCCATTTCTTATTTTCTTTACTCAGAAAAGCGGTTATTCTTAAGAACCTTATCTTTGTAGGATGGCTGCTGGCATACTCCACAAGTGGCTGATGAACAGGATGAGGTACCTATGTGGAATCCTGTTCTGTTTCAGCTCCCTTCTCATGAGCTTCTTCTCTTCTACAAGATTGGCCAAGAAGTTCAGAAGTATGAACATGTTTTATGTTATTTAATTTCTTATCTCTTATTCAAATGACAAAAAAACCATATGATAGTGCAAAAATTGAATGCGACTATATGATTATTTGATATTCTGATGCTCAATATAACATGTTCAGGTGGAGTGGTGCCATGAAAAGATCTCTAGATGGAGGAAAAACCTGGTCGGCAAGAGAACAGCTACCACCTGGCATCCTTGGTCCTATTAAGAATAAGGCATGTCTAAATCTGTGGTGTATTGCCTTCCATCTTAGCAAAGCACATTGTGACCATAAAATAAGGAAAATATTGTCAACCTGAATACATATGGCAGCACAATCATTATGGGTTATTAACAAGTCAGTACTCAGTAGTAATTTAATTGCCTTTCCATTGTGATTCTCAAAAGTTTATTGATTTGGTTCCTGAATGGCATTTTCTCCAATGTAGCCTTTCTTGGTTGAAGATGGGCGCTTGCTATGTGGGTCATCTGTTGAAAGCTGGAACTCTTGGGGTGCATGGCTTGAGGTATCCATTACATTGAAAATAAAAAAAATCATAGACTGAACTCATGCGTCTCACATTATGTGTAGTGGAAGTTTTAATTACTCTTATCAACTTAGGTCACAAAAGATGCCGGACGAACATGGCGGAAGTATGGCCCTATATATATTGAAGGCGAAACACTAGGGGTGATCCAGCCAGTTCCCTACATGACTGCCAATGGGACTATTCGAGTGTTGCTGCGATCTTTTGAGACAATTGGTCGTGTCTGCATGGCTGATTCTGCTGATGGGGGTGTAACATGGAGTTATGTGCACGAGACTGACCTTCCTAACCCAAACTCTGGTTTGTTCATCTCCTAGCTAAATTAGTTTTCTCTTTGCTTCAGTACCCTTGTATAGAATAGCAAATCCTCGAATGCTCATTAGTGACCACTGAGCACTGAACATCTGCTGGTGCTGGGAACACATTATTAAACAGTTTGAAGTTTCCAAAAATTTTAAGATATACTGATAGATTTCTGAAGAATATTAATAACTCTCTCTCTCGACTTCAAACCTGAAGGGATTGATGGAGTTAAGATGAAGGATGGGAGAGTACTCCTTGCTTACAACACCTTCTCCAGAGGAACACTAAAAGTTGCAGTCTCCATGGATGATGGTGATTCATGGAACGATGTAATGGCATTGGAAGATACTGAAGGCATGGAGTTTTCATATCCTGCAGTGATCCAGACCATGGATGATCTCATACATATCACGTACACATACAACCGGACACAAATTAAGGTAATCTTTCTGATGCATATTCAAAAGAAAATATCGATCTTGTTTTCCATCAAGAACAGTTTTCTGCCCGTTAGTACCTTTTTTAATAGTATTATTGAATGATTCACAGCATGTTGTTCTTCAACCTAGCGGGATAGTGAGGTGGTGAGTGTGCAACTATTGGGAGAGTTATTGCTGCCAATTGCAAGGCACGCAAGTTTCTCTATGTGTATCACATCATATTGGCTGGACCGTGGTGCTAAATTGGTCATCAATGATTCTTTTTTTGGGTATATTTGGTCATTTGCATAATTTCTTGCAATTGTAACCTAATTAATAATCTCCCTGATTCCTATCAACAATGATATTGAACATCTGTACATATGCCCCAAAGTTTAACATAAGGTGTTCCGTATATGGCTGTACTTCATGTTCATGTTGTGATAACCTAAGATATTATTACTTTAACTGAGAACTTGAGATGTCCCTTTTGCTGTGATGCAACTTCCAGAAAATAAATTATGGTTATCTTGATAAAATAATATATGTATCAAGTTTGCTTTATTTAAAAAGAAAGACTTCATTATTGGGCACCATAGTATGCTTGAATAATGATCCTCAAGAAAGCAGATCCTAAATCTTATTACATTATCATCCAGGTACTATAATCTTTAGCCTTTTATTTTCTGAATTGAGCTTTTCTTGTTAGTACCACAATGGGTTGGAATATAGTAAAATTCTTGTCTTGACTCTTAGGCCCTGTTTGGATCCTCCAGGCTATTAAATAGCCATCCGGAATCTTGCTATTTAGGAGTATTATTAAACGTAGATTACTGAAAAAACCCATTCCATAACCCCTAGGCTATTTTGCGAGACGAATCTAATGAGGTATATTAATCCATGATTTGCTACAGTGATGCTACAGTAATCATCCGCTAACCAAAACTATGAAGAAAAGGAAATGTCTATTACACCTTGATGGATTTAACAAAAACTCGGCCTCTGGTTTAGGGTTGCTAGCAGATTTTGGGTAAACAGTAGGTAACTGGGATTTTTCTCGTAACAGAGCAACAGAAACAGCATTTCATGATTATTAGTTGTTAAGGAACCATAATCATGGTCAGTATCTCAAAACCAACACTACATAAGAAAAAACAAAATTATACACACATATACAAGTTCTGAAGTTCATTGTCCCCACTGACACTGGTCACAGCAACCAACAGGGAAAAAACATTTTTTTTATAGATAGCCAACATCTTGTGAAAGGAACCTTGTATATAATAAGCACCCATGTGATTCTACAGTAAACAAAGAGTTGTGCCAGTTATATCAAGCATTTGTGAACACGGTAGGCACCATTCTCTTGTTCCTCTCTGTGAAGAGATCTTGAAATTTACATGTGAATTTGTGATCTCGTGTACTCTTTATGAAATATACTTGCAAGTTGCAAGTTACTCTGACTTGTGGCACTTGATCTCCCAATCAAATTTCTTTCTCTCTTGCTGAACTCGGGCTTGCAGTTTGACCTGCCTACTCTCAGCTCTCAGGTATGCCTCATTCCTCCTAAGATGCCATCCCAACCCTTGCTCTATGTTTTGTATGATTAGCCAATCTATCCTAAGATGCCATCCCAACCCTTGCTCTATGTTTTGTATGATTTGCCAATCTATTCTACTTATCTTATCTCTATTCCCAAATAGTAGCAATAAGTCAACAGATTGTTCCAGCTGAATTCTGCTTTTGTGAAAGATAAAAGAATATGGATGTCAAATGCTATGATGTGAAAATTTCCAGGGTCTCACTTCGATGCTGGGAATTTTTTTTAGATAATGGATGCTTCAATGCTGGGATAGAATAATCTATCTTGAATTTTATTTATGAACTTCCTTCCTGTAAGGAAACTGGAAATGCAAGGGGAAAGACATACAAGTGAAACAGTGCCTACTATACCTGCATCAATAAAAACTGTAAATAGACCAGGTTGTCTTCTCTGCCTGCACAGGGGAGTAAAGACCACGGATTAATCCTTCATATCCAAGAAAAGTGTGACAGTGTGTTTGAAGGATGAAATGTTTTTTTATAAGAAAAAATCTTTGTGTACAATTATTCTCCTTTTGGCGATTCAGAAATGACCAATAAGTGGAGCGTATTGAGGGAAGAATTTACATTTTCAGAAGGCAACGTACCTTTCAAAACCTGCCATGCTTCCACAATTGTTGAGGTATATTATCATCCAAACTTTGTTCTAATTTTATTTAAATTTTCTTTTGATGGATTATCTTCTCTGTATAATGTACCTTTCCTGGTCAGGTTCAGAAGAATATGTTTCTGGTGGCCTACTTTGGGGGAACACAGGAAGGTGCTGACGATGTTAAAATTTGGCTACAGAGATATTACGTATGTTAAAGTTCCTATTTCCTGACGGATTATTGATCTTCCAGCGTATCTGTGTATTGTTATTGTTCACTTGATACACAATACAGTTAACAATTTCACCTAATACAGAATGGCTCGTGGCACTCTCCTGAAGTAGTTGATGAAGTGCCCAATGTTCCTCTGTGGAACCCTGTTCTCTTCCAGCTTCCTTCTGGTGAGATCCTCCTTTTCTACAAGGTTGGCAAGACTGTCGAAAGGTGAGTGATCCATTCCCATATCTGCATTCCCAGCAATTAATACCCCAGTTAAATGTCTGCACCAACTGTTCAGCTGAATTTGACAATTTTTGTTTAGTTGGAGTGGATGCATGAAATGCTCATCGGATGGTGGTGTTATCTGGTCAAAGAGAGAGCAACTCCCACCTGGTATCCTTGGCCCTATCAAGAACAAGGTGTGTATTTGTTCCAGACTTGATCAGTATTTTGACACTGTCACATAACACTACGATTATTCTATGGACCTGCCTACCTTCTCATCAACAGTGTCTCCCAATACAGCCTTTCTTGCTCAAGGATGGCCACCTGCTCTGTGGAACATCAGTTGAAAGCTGGAATTCATGGGGTGCTTGGCTTGAGGCAAGTCAGCTGTGAGCCATCAGCTGCAACTGTTCTTCAATATCTCTTGCACACCTCAAGTCAACAATGTTTCATCTTAAACAGGTCACCAAGGACCATGGTAAAACATGGAAGAAGTATGGCCCGATTTACGTAAGAGGAAAAACCATGGGAGTGATTCAGCCAGTCCTCTACCAGACCAGCAGTGGCACAATCCGCATGCTGCTGCGCCCGTCCGATGAAGTAGGTCGCATCTGCGTTGCGGAGTCCAAGGATTCTGGTGTCAACTGGAGCTATGCGCAACCAACCGAGCTCCCAAACCCCAATTCTGGTTAGTATCACCGATCATTCTGCCACAGTCAGTTCTGAATTGCAGTACATCTTCATCTGCAGCTTGTATGATGCTATCTATGTGGTGGGTGGAAAGCAGGTATCGATGGCGTTAAGCTCAAGGATGGGAGGGTGGTGCTGGTATACAACAGCACCTCAAGAGGGGTGCTCAAGGTTGCTGTTTCTCAGGATGACGGCGACAAATGGGAGGATGTGCTGACACTGGAGGAGACCCATGGTGTGGAGTTCTCATACCCTGCTGTAATTCAGACTTCTGATGGGCTGGTTCATGTGACATACACATACAAAAGGACTCAAATCAAGGTAGTTTTACCCATGTTGTTTGGTCTTCTTATGGTAATTACCAGTTTCATCATCTTCCATGTTAAGAATGAATTTCTTTTGGTCACTGCTCTTTGCAGCATGTCGTTCTACAACCAAGCGAGGTTTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025802