BGIOSGA025844

From RiceWiki
Revision as of 06:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025844| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025844, complete gene.| tag = OsI_262...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025844

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025844, complete gene.

LocusTag

OsI_26274

Ensembl Transcript ID

BGIOSGA025844-TA

Ensembl Protein ID

BGIOSGA025844-PA

Length

2795

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:18703346..18706140

Sequence Coding Region

18703346..18703524,18703636..18703698,18704830..18704946,18705109..18705367,18705455..18705610
,18705719..18705870,18705981..18706140

Genome Context

<gbrowseImage1> name=IndicaChromosome07:18703346..18706140 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:18703346..18706140 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGTAATGGCAGCATTAAGGCCTACGCGGCCGTTGTTCTGATCAGGATCATGTACTCGGTTATGCAAGTCGTGAGCAAGGTTGCCTTGGATCAAGGCATGAGCCCGTTGGTGTTTATATTCTATCGGCATACCGCTGCTGCCCTCGTGTTGATCCCTATTGCTTTTGTTCTAGAGAGGGGAAAAGCTAAACGGGTGACGTTAAAAAATGCAGGGAAAATGTTTATACATGCCTTATATGGGGTGACAGGATGTGGTGACTTATTTAACCTTGGTCTGAATTATGCTTCAGCAACTTCATCATCAGCATTGTACAATGTTCAACCAGTGGTTACCTTCATCCTTGCAGTCATATTTGGGTTGGAGTCTATGAAACTGAAGAGATTCCATGGACATGTAAAATCGGCTGGTATTCTGTTCTGCATTGGCGGAGTCATCGTGTTGGCCTTCTATGAGGGGCCTATGTTCAAATCATTCAACCATCACCACCTCTTTCAGCAAGGCAGCAGCAGCAGTTCTTCTGCAGGAGACACCCACTATTCCAAGAAGCAATGGGCATTGGGAATTTTTCTCATGACGCTTTCTAACGTTTTAGCAGGCTTATGGAATGTGTTCCAGGGGCCGTTGATAGAAGACACTTCCAAGCTGATGAACACCACGACACAGATCTCATTCGCGTCAGTCCAAGCCTTTGTTGTGGCTGTTGCAGCCGAGAGGGACTTCTCCAAGTGGAAGCTTGGCTGGAATTTTGGCCTTGCTGCAATAATCTACAATGGTGTGATTGTCACTGCACTTTCATACTACATGCAAATATGGACGATCGCGAAGAGGGGGCCAGTGTTCCTTGCCATGTCGATGCCACTTACTTTGATATTCACAATCATCATATCCTCATTCATTTTAGGAGAAGCAGTTAGCCTAGGGAGTATTGTTGCTGGAATACTACTAATTGGAGGCTTATTTAATGTTCTGTGGGGTAAAAATTTAGAGGAACATGATGAACTGAACAAGATAGGTCCAGCTATACCTGACTTGGAGATGCAGGATAAAGAGGCCCAAGTGCCTAATGACCGCGCAACAAATTGA</cdnaseq>

Protein Sequence

<aaseq>MGNGSIKAYAAVVLIRIMYSVMQVVSKVALDQGMSPLVFIFYRHTAAALVLIPIAFVLERGKAKRVTLKNAGKMFIHALYGVTGCGDLFNLGLNYASATSSSALYNVQPVVTFILAVIFGLESMKLKRFHGHVKSAGILFCIGGVIVLAFYEGPMFKSFNHHHLFQQGSSSSSSAGDTHYSKKQWALGIFLMTLSNVLAGLWNVFQGPLIEDTSKLMNTTTQISFASVQAFVVAVAAERDFSKWKLGWNFGLAAIIYNGVIVTALSYYMQIWTIAKRGPVFLAMSMPLTLIFTIIISSFILGEAVSLGSIVAGILLIGGLFNVLWGKNLEEHDELNKIGPAIPDLEMQDKEAQVPNDRATN</aaseq>

Gene Sequence

<dnaseqindica>1..179#291..353#1485..1601#1764..2022#2110..2265#2374..2525#2636..2795#ATGGGTAATGGCAGCATTAAGGCCTACGCGGCCGTTGTTCTGATCAGGATCATGTACTCGGTTATGCAAGTCGTGAGCAAGGTTGCCTTGGATCAAGGCATGAGCCCGTTGGTGTTTATATTCTATCGGCATACCGCTGCTGCCCTCGTGTTGATCCCTATTGCTTTTGTTCTAGAGAGGTCAACTTCTGTCAACTATGCCTTTTAAATTTTTTCCTTTAATTTGTGAGGAGAGCTTGTCAACTGTGGTTGATTGTGACTTTACTGTTTTTATTCTCAATTGTTTTGCAGGGGAAAAGCTAAACGGGTGACGTTAAAAAATGCAGGGAAAATGTTTATACATGCCTTATATGGGTAGGTTGAACTGTTTTGACTAAGTTTACAGACAAATATAGTAATATTTATAATACTCAATTAGTTTCATCAAATCAATAATTCAATATATTTTTATAATAAATTTTTTTAGTTAAAAATGTTACTACTTTTTTCTACAAAGTTAGTCAAACTTAAAGCACGTATCAAAGTCAAAACGTCTTATAACCTAAAACGAATGGTGTACTAGCTACTATCAAATGGTTGTACACTCGGTAGCATCAGAATCTTTAAAAAAAAAGTTGATTTCTATGTAATACAAAAATAATACCGTCTATCACAACGGAACGATCGGTAGCGTAGAGCTAATATTGTGTGCCTATAACTAACGAGTACACTGACCGCTAAAATGTCGCATTTCGTTGGCTTTAGCTAATAAGTCGTAGAAAAATAAACGAGACAGCAGAAAATATACAATTTCTACTCTTATGTGCTTAAAAGCCAAGACTTCAAAAAAAAGTAACTAAAAATGCTTAGAATAATTTAAAATTAAGTCTAGGAATTTAAATTTTATCTGTCGCCTATAAGCCAATAATAAAACGACGTGGTCATAAGTTAATTAGCAAGCCTCAGCTCCTCTTAAATGTTAATAGTGGGACTTGGAGAAGGTTGATCGTGTGTGTGCCTTCCAGTCCTCTGATACTGACAGTCATGTCTGGCGAATTAATGACATACCTTGAAAAATCGGTAATCTGAGCATTTTCACGCTTATTCGTATATTGCATAATTCGTATGTATGTAATACTCCCTCTGTTTCGAAATATTTGATACCATTAACTTTTTAGCACAATATTTGACCGTTCGTCTTATAAAAAACTTTTGTGAAATATATAAAATTATATGCCTACATGAAAATATATTTAACAATGAATCAAATGATAGGAAAAGAATTAATAATTACTTAATTTTTTTAATAAGACGAACGGTCAAACATGTGCTAAAAAGTCAACGGCATCAAACATTTCAAAACAGAGGGAGTATTTCTTTAATGTATTCAGAAAAAGAGTTCAATTTTTTTAGTAATTTTACATTTTTTATCCTTATAGAATTTCGTTTAATAAACACAAAGCTGTTTTCAGTTTGAAGTCTGAGTTGTTCACGATTTAATCTCAGGGTGACAGGATGTGGTGACTTATTTAACCTTGGTCTGAATTATGCTTCAGCAACTTCATCATCAGCATTGTACAATGTTCAACCAGTGGTTACCTTCATCCTTGCAGTCATATTTGGGTAATGCAAATTTTACTTTGTACACCTAATAATGAAAATTCAAATTTAAATTAGTCTAGTAAAAATAATTATTAATCAATAAAAAATGAATTCATTTTAAATTAGTTTAATACACATACACTGTAGCATTAGTCTGAACAAGTTATTAATTTCTTGTGACAGGTTGGAGTCTATGAAACTGAAGAGATTCCATGGACATGTAAAATCGGCTGGTATTCTGTTCTGCATTGGCGGAGTCATCGTGTTGGCCTTCTATGAGGGGCCTATGTTCAAATCATTCAACCATCACCACCTCTTTCAGCAAGGCAGCAGCAGCAGTTCTTCTGCAGGAGACACCCACTATTCCAAGAAGCAATGGGCATTGGGAATTTTTCTCATGACGCTTTCTAACGTTTTAGCAGGCTTATGGAATGTGTTCCAGGTATACTCAAACTTCAGATTTGATGGCACTTCAGACCATGATTTCGATTGAGTATATTCAACATGGTTTTTTCTTTTTCCTATCCAGGGGCCGTTGATAGAAGACACTTCCAAGCTGATGAACACCACGACACAGATCTCATTCGCGTCAGTCCAAGCCTTTGTTGTGGCTGTTGCAGCCGAGAGGGACTTCTCCAAGTGGAAGCTTGGCTGGAATTTTGGCCTTGCTGCAATAATCTACAATGTAATTGAGCTTTCTGATGAAATGCTGTTCAATTTAAAATATTGCAAGTTTGCAACTCAAATGCTCAGCTAAACCTCTGTTTTTTCGATGAAACAAATGTGGTTGCAGGGTGTGATTGTCACTGCACTTTCATACTACATGCAAATATGGACGATCGCGAAGAGGGGGCCAGTGTTCCTTGCCATGTCGATGCCACTTACTTTGATATTCACAATCATCATATCCTCATTCATTTTAGGAGAAGCAGTTAGCCTAGGGAGGTAAGTGAGACATCCTGAACTATTAACAGACTCGTAGTGCAATGAAAAAATTCATAATTTTTTTTCTTGACCTAACTCATTTGCTGATGTTGTTTAATCTAACTGTGCAGTATTGTTGCTGGAATACTACTAATTGGAGGCTTATTTAATGTTCTGTGGGGTAAAAATTTAGAGGAACATGATGAACTGAACAAGATAGGTCCAGCTATACCTGACTTGGAGATGCAGGATAAAGAGGCCCAAGTGCCTAATGACCGCGCAACAAATTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025844