Os12g0149900

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Revision as of 10:21, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0149900| Description = IQ calmodulin-binding region domain containing protein| Version = NM_001072695.1 GI:115487351 GeneID:4351511| Length...")
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Gene Name

Os12g0149900

Description

IQ calmodulin-binding region domain containing protein

Version

NM_001072695.1 GI:115487351 GeneID:4351511

Length

3809 bp

Definition

Oryza sativa Japonica Group Os12g0149900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2450856..2454664

Sequence Coding Region

2451062..2451601,2451691..2451792,2452237..2452329,2452443..2452589,2453063..2453150
,2453338..2453426,2453698..2453763,2453962..2454076,2454269..2454462

Expression

GEO Profiles:Os12g0149900

Genome Context

<gbrowseImage1> name=NC_008405:2450856..2454664 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2450856..2454664 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggtggacgctgctccggatcgcatggacgcggcctcttcttggatgaatcctccggttgaggtctcctctccggtggccggcggcggcggaggagaggatggggcagcgaccaagctgcagaaggtgtaccggagctaccggacccggcgcaagctcgccgactccgccgtcgtcgtcgaggagctctggtggcaagcgttggatttcgcgcggctgagccacagcaccgtctccttcttcgacgacccgaaaccggagaccgtagcgtcgcgatggaaccgcgtcagcctcaatgcctccaaggtgggtcagggtttatccagagacggcaaggctctgaagctggcattccagcactggatcgaggctattgacccacggcatagatatggtcacaatctgcatttctactatgatgtttggtgccaaagccaggccggccagccattcttctactggcttgatattggggaaggaaaagatgttgaccttcctgagtgtcccagagctcgcctgaagaagcaatgcataaaatatcttggtccgcaagagcgtgagctctatgaatacatagttacagaagggaagattatccataagcactctggagaaccacttgatacaagccagggtcctaaagggacaaaatggatttttgttatgagcacaacaaagaaactttatgctggcaagaaagagagaggtgtattccagcactcaagctttttagcaggaggtgctaccatagctgctgggaggtttacagcagaaaatggagttatcaagtccatctgggcctatagtggtcactataaaccaagtgcagagaacctcgccaacttcatgaacttccttgaagagaatggagttgatctgaaagaagttgaggtgcgctcatccaccaacgaagactattatgaagatccagtgcctaataaacagaaccctcttgctaccgtcatggaatccaatcctccacaattgattctccctcagaacatgatagaagaagataaggcatctgagccgttttcgcaagctgaaggtgccgaaagcgataacgttcctaaagtgcaaacaaagccaacctaccaaagaaccctctcaggtggtctgaaaagccctagagctgctgatgtcccgcgggaagcaattctcgagagggtgaaatcgaagggagagtcgaaatcctatcagctcgggcacaggctctccctgaaatggagcactggggttggtccaaggattggatgtgtgaaggactacccaatggagctcagaatgcaagcactggagatggtaaacctgtcaccaagggcgtcgactccatcgccgtcatggaggctgccagcatgcctctcacctacacccaacttaccatcatctcctcttggaccaatccagacttcactgccccagccaagttag</cdnaseq>

Protein Sequence

<aaseq>MGVDAAPDRMDAASSWMNPPVEVSSPVAGGGGGEDGAATKLQKV YRSYRTRRKLADSAVVVEELWWQALDFARLSHSTVSFFDDPKPETVASRWNRVSLNAS KVGQGLSRDGKALKLAFQHWIEAIDPRHRYGHNLHFYYDVWCQSQAGQPFFYWLDIGE GKDVDLPECPRARLKKQCIKYLGPQERELYEYIVTEGKIIHKHSGEPLDTSQGPKGTK WIFVMSTTKKLYAGKKERGVFQHSSFLAGGATIAAGRFTAENGVIKSIWAYSGHYKPS AENLANFMNFLEENGVDLKEVEVRSSTNEDYYEDPVPNKQNPLATVMESNPPQLILPQ NMIEEDKASEPFSQAEGAESDNVPKVQTKPTYQRTLSGGLKSPRAADVPREAILERVK SKGESKSYQLGHRLSLKWSTGVGPRIGCVKDYPMELRMQALEMVNLSPRASTPSPSWR LPACLSPTPNLPSSPLGPIQTSLPQPS</aaseq>

Gene Sequence

<dnaseqindica>3064..3603#2873..2974#2336..2428#2076..2222#1515..1602#1239..1327#902..967#589..703#203..396#taggtagctatggcagctgcttcttcctcgcgcgaacaaatcaattctcagaatagaatataataacctccctttaattgctgtattttattccctaatctcactgtttacagcgacgcaactccgattaaattcgcccacccgtccagccatttctactcgtcttcctcctccctccaccttaaacctcgaggagtcaagaatgggggtggacgctgctccggatcgcatggacgcggcctcttcttggatgaatcctccggttgaggtctcctctccggtggccggcggcggcggaggagaggatggggcagcgaccaagctgcagaaggtgtaccggagctaccggacccggcgcaagctcgccgactccgccgtcgtcgtcgaggagctctggtaaattctccacagatcctaccccaatctttcttctcccttcccttttcttttcttttcttttactgatccttctgaagcttcttgctccggatttgtttactgttcggtttcgtggaatttattccataatctaaaaaaaactgcttgatttttaattgagatggtttgtggattggattgttgatgaaggtggcaagcgttggatttcgcgcggctgagccacagcaccgtctccttcttcgacgacccgaaaccggagaccgtagcgtcgcgatggaaccgcgtcagcctcaatgcctccaaggtctcgatctcggcctctccttccctttctgtgcaaccacttcgctaccaccacaaaccctcgagaaagcgatttcttttgggttttacttggaccaagtttcattgactgctcttctgtgtgtttgtgtttgtttgactgctcttctgcgtgtttgtgtttgaaattgttgtgtaaaaaaattgtgctttgatgcaggtgggtcagggtttatccagagacggcaaggctctgaagctggcattccagcactggatcgaggctgtgagtacaaatcgtacagatgaactgatgtttttttagtatagctgtaccaggattctttagctttagatatcactacttttgtttcacaaatgtgaaaagaggccgctttcggttatgggttgacttggaccttttcagttgtgtgtgaacatcgatcataaaagctccatatcttactgtcatagaagcttctgtccatgtttatttaagttcattgtgcaaaccttgtgaatgcaacttgattacccagtgtttacttgttgtatagattgacccacggcatagatatggtcacaatctgcatttctactatgatgtttggtgccaaagccaggccggccagccattcttctactggtaagaagttggttgtgttttgtgtgtttgcatttgcaaagtatgttgttggaagaaatgggttggatgtctgtgacacaagagatttgcaggcagagtaatagattcagtgttgcactcttatctcagaaatttcagtgagtggtttggttgtgcattgaattcaataatctttatgcatatgtaggcttgatattggggaaggaaaagatgttgaccttcctgagtgtcccagagctcgcctgaagaagcaatgcataaaatatcttggtccggtaagatcatgtctataattgttccctaccttagttcaaaatcgcgtatactgttgaaatactaagaagagctgcatactccctcctagtacaacaaggggtcacattccctcctagattgcctttttttgggacggagggagtaggagttaaggctttttgtcatgtgcaccttttagaattttattgaacttaaaacatgtgctatgtctctgtgttgctattattatattgttgtgcaattaagctatacaccctgcaaagccagaggtgcacaatccacagatctgactatcaatatataataccctagcaactagtagcataccctggcctacttccattcacacaatatttcagtttttcatgctaactcatcctcatatttgacaccgtagaaagttgcagcatgaaactattttattttaatgaaataatgttacatgaaatctatattttctggatttttgcagcaagagcgtgagctctatgaatacatagttacagaagggaagattatccataagcactctggagaaccacttgatacaagccagggtcctaaagggacaaaatggatttttgttatgagcacaacaaagaaactttatgctggcaaggtagttttcccattctggcaagttgttcatgttgttgctgttgaactaaattatgttcagctagtttaccattgctatttttatttatcataagctgatttttctctatccagaaagagagaggtgtattccagcactcaagctttttagcaggaggtgctaccatagctgctgggaggtttacagcagaaaatggagttatcaaggtagagatgaagaactatgtgccctgtcaatgttactatttatgctcagtgttttcctttattgatatgactgcttatgttcttacattgtgtccacatctgtgatctaaaaagattggtgattcagttgctaatagtacttcaaacaattctttcgtgtttctgggattgccatgaataactatttcaggcttgcctccttttgtgagggagattggaaaatgcctgaagattggatgtattttagaaacatattctcgagttttaaattttgtatatttgatcaaactacattcttttaaacatttggccattactttcccatccttctgcttactagcgcatggtaatcattctgataatttgtttgtcttgttctcctgcatgttgattgggtgcatcgctgctttctgctattttctgatgatcactttctgatttcagtccatctgggcctatagtggtcactataaaccaagtgcagagaacctcgccaacttcatgaacttccttgaagagaatggagttgatctgaaagaagttgaggtatgccattttcaggcccatgaaacctattatacccctatgaaagcaaatatcaggtggcttcaactagcttgtttttgtgtattcaggtgcgctcatccaccaacgaagactattatgaagatccagtgcctaataaacagaaccctcttgctaccgtcatggaatccaatcctccacaattgattctccctcagaacatgatagaagaagataaggcatctgagccgttttcgcaagctgaaggtgccgaaagcgataacgttcctaaagtgcaaacaaagccaacctaccaaagaaccctctcaggtggtctgaaaagccctagagctgctgatgtcccgcgggaagcaattctcgagagggtgaaatcgaagggagagtcgaaatcctatcagctcgggcacaggctctccctgaaatggagcactggggttggtccaaggattggatgtgtgaaggactacccaatggagctcagaatgcaagcactggagatggtaaacctgtcaccaagggcgtcgactccatcgccgtcatggaggctgccagcatgcctctcacctacacccaacttaccatcatctcctcttggaccaatccagacttcactgccccagccaagttagaatagcatatgagtatgtaactagtatgtgcagcagcgagacaccattgcagaattgcagttaagctcttggtgtagaatgcattggccagagtcagatgctagaggttaatgcctgctgcttttcaaaggttatgtggatctatttgtgccatgaatgaatcaataagattagtaatataaatcctccatgtttgaattttgttt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0149900, RefSeq:Os12g0149900