BGIOSGA025888

From RiceWiki
Revision as of 06:35, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025888| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025888, complete gene.| tag = P0458H0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025888

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025888, complete gene.

LocusTag

P0458H05.131

Ensembl Transcript ID

BGIOSGA025888-TA

Ensembl Protein ID

BGIOSGA025888-PA

Length

2888

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19468243..19471130

Sequence Coding Region

19468243..19469116,19469298..19469438,19469682..19469812,19469890..19470100,19470222..19470459
,19470544..19470694,19470780..19471130

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19468243..19471130 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19468243..19471130 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCGCCGCCACCGTTCCTACCTCGCCGGCGTCGCCGCCGCCGCCGCCGCAACCGCAACCTTCCTCGTCGCCGTCCTCCTCCACGCGCCGCTCGCCGCCGGCGACGACGAGCCTCCGCCATGGGTCCTGTGCGCGCCCTACCCTCCCAGCGGCAACTACTCGAGGAACGGCACGTACCAGGCCAACCTCGACCTCCTCTCCACCACCCTCCCCAAGAACACCTCCTCGTCTCCGGCCATGTACGCCACGGGCACCGTCGGCGACGTCCCCGACAAGGTGTACGGCCTCGCGCTGTGCCGCGGCGACGCCAACGCCTCCGCCTGCGAGCGCTGCGTCGCGGCCGCCCTCCGCGACGCGCCGCGGAGGTGCCCGCTCGTCAAGGACGTGCTCGTCTTCTACGACCTCTGCCAGCTCCGCTACTCCAACCGCGACTTCTTCCTCGACGATGACTACTTCGTCACCACCTACACCCTCCAGCGTTCCCGCCGCGTGGGCGCCGCGGCGGCGGCAGCGTTCGACGCGGCCGTCGCAGTGCTCGTCAACGCCACCGCGGACTACGCGGCGGCGGACTCGTCGAGGCGGTACGGCACGGGGGAGGAGGAGGGCGTCGACGGCGACAGCGACCGCCCCAAGATCTACGCGCTGGCGCAGTGCACGCCGGACAAGACGCCCGAAGTCTGCCGGACCTGCCTCTCGACGGTGATCGGGCAACTGCCCAAAGAATTCAGCGGGAGGACGGGAGGGGGCATGTTCGGGGTGTGGTGCAACTTCCGGTACGAGGTGTTCCCTTTCTTCTCCGGCCGCCCGCTGCTGCAGCTTCCGGCGTTCGTGGAGACGCCGCCGCCGCCGCCTTCGCCATCGGCGACCAGTGGAGAGAAAACGAAAAATAGGATTGGTGCGGTTTTAGCAATAGTTATGCCTGCAATAGCTGCAGTACTGCTCATGGTTGTAGCATGCGTTTGTTGCTGGAAGAGGATCAAGAAGAGACGACCAGAAGAACAGACGTTTCTGTCCTATTCAGTTAGTTCAGATGATATTCAGAGCATTGATTCGCTTATACTTGATCTACCAACAATACGAGTTGCTACAGATGATTTTGCTGATACTAAAATGATTGGCCAAGGAGGATTCGGTATGGTTTACAAGGGAGTCCTACCTGATGGCCAAGAAATAGCCGTGAAGAGGCTTTGCCAGAGTTCCAGACAAGGAATAGAAGAGCTGAAAAGTGAGCTGATTTTGGTTGCTAAGCTTTACCACAAGAATCTAGTAAGGCTTATTGGTGTTTGCTTGGAACAGCAAGAGAAAATACTTGTCTATGAATATATGCCAAATAGAAGCCTTGATATCATTCTTTTCGATACCGACAAGAACAGGGACCTAGATTGGGGGAAAAGATTCAAGATTATAAATGGGATTGCTCGAGGCTTGCAATACCTTCATGAAGATTCTCAATTGAAGATAGTGCACCGGGACCTCAAAGCAAGCAACATCCTATTAGACTTTGATTACAGCCCTAAGATTTCTGATTTTGGCTTAGCAAAGATATTTGGAGGGGATCAATCAGAAGATGTCACTAATCGAATCGCCGGAACATATGGATACATGGCACCAGAATATGCCATGCGTGGTAATTATTCAATCAAATCGGACGTGTTCAGCTTCGGCGTTTTGGTATTAGAGATTATCACCGGAAGAAGAAACACTGGCTCATATGATAGTGCGCAAGATGTCGATCTCTTAAACCTTGTGTGGGAGCACTGGACAAGGGGAAACGTTGTAGAGCTGATTGATCCATCCATGGGCGACCATCCTCCAATCGAGCAGATGTTGAAGTGCATCCACATCGGGCTGTTGTGTGTTCAGAAAAAACCTGCAAGCAGGCCGACGATTTCGTCAGTAAACATCATGCTTAGCAGCAACACTGTTCGTCTCCCTTCTCTATCCAGGCCGGCCTTCTGCATCCAGGAGGTTAGTGCCAGTGACAGCTCTAATCCGTATTCAGAACGCTATCCAAGACCAAGACATTCCGGGTATTCTGATAATTCAACAGTGGTGTCTTCGAATGATTTGTCAATCACAGAGCTTGTGCCGAGATGA</cdnaseq>

Protein Sequence

<aaseq>MRRHRSYLAGVAAAAAATATFLVAVLLHAPLAAGDDEPPPWVLCAPYPPSGNYSRNGTYQANLDLLSTTLPKNTSSSPAMYATGTVGDVPDKVYGLALCRGDANASACERCVAAALRDAPRRCPLVKDVLVFYDLCQLRYSNRDFFLDDDYFVTTYTLQRSRRVGAAAAAAFDAAVAVLVNATADYAAADSSRRYGTGEEEGVDGDSDRPKIYALAQCTPDKTPEVCRTCLSTVIGQLPKEFSGRTGGGMFGVWCNFRYEVFPFFSGRPLLQLPAFVETPPPPPSPSATSGEKTKNRIGAVLAIVMPAIAAVLLMVVACVCCWKRIKKRRPEEQTFLSYSVSSDDIQSIDSLILDLPTIRVATDDFADTKMIGQGGFGMVYKGVLPDGQEIAVKRLCQSSRQGIEELKSELILVAKLYHKNLVRLIGVCLEQQEKILVYEYMPNRSLDIILFDTDKNRDLDWGKRFKIINGIARGLQYLHEDSQLKIVHRDLKASNILLDFDYSPKISDFGLAKIFGGDQSEDVTNRIAGTYGYMAPEYAMRGNYSIKSDVFSFGVLVLEIITGRRNTGSYDSAQDVDLLNLVWEHWTRGNVVELIDPSMGDHPPIEQMLKCIHIGLLCVQKKPASRPTISSVNIMLSSNTVRLPSLSRPAFCIQEVSASDSSNPYSERYPRPRHSGYSDNSTVVSSNDLSITELVPR</aaseq>

Gene Sequence

<dnaseqindica>1..874#1056..1196#1440..1570#1648..1858#1980..2217#2302..2452#2538..2888#ATGCGCCGCCACCGTTCCTACCTCGCCGGCGTCGCCGCCGCCGCCGCCGCAACCGCAACCTTCCTCGTCGCCGTCCTCCTCCACGCGCCGCTCGCCGCCGGCGACGACGAGCCTCCGCCATGGGTCCTGTGCGCGCCCTACCCTCCCAGCGGCAACTACTCGAGGAACGGCACGTACCAGGCCAACCTCGACCTCCTCTCCACCACCCTCCCCAAGAACACCTCCTCGTCTCCGGCCATGTACGCCACGGGCACCGTCGGCGACGTCCCCGACAAGGTGTACGGCCTCGCGCTGTGCCGCGGCGACGCCAACGCCTCCGCCTGCGAGCGCTGCGTCGCGGCCGCCCTCCGCGACGCGCCGCGGAGGTGCCCGCTCGTCAAGGACGTGCTCGTCTTCTACGACCTCTGCCAGCTCCGCTACTCCAACCGCGACTTCTTCCTCGACGATGACTACTTCGTCACCACCTACACCCTCCAGCGTTCCCGCCGCGTGGGCGCCGCGGCGGCGGCAGCGTTCGACGCGGCCGTCGCAGTGCTCGTCAACGCCACCGCGGACTACGCGGCGGCGGACTCGTCGAGGCGGTACGGCACGGGGGAGGAGGAGGGCGTCGACGGCGACAGCGACCGCCCCAAGATCTACGCGCTGGCGCAGTGCACGCCGGACAAGACGCCCGAAGTCTGCCGGACCTGCCTCTCGACGGTGATCGGGCAACTGCCCAAAGAATTCAGCGGGAGGACGGGAGGGGGCATGTTCGGGGTGTGGTGCAACTTCCGGTACGAGGTGTTCCCTTTCTTCTCCGGCCGCCCGCTGCTGCAGCTTCCGGCGTTCGTGGAGACGCCGCCGCCGCCGCCTTCGCCATCGGCGACCAGTGGAGGTGAGCAACACAAACCACTTTTCTCTTTTGGGTGTGAAAGGCACACAGATTAATTAATTGCAGATAATCTTGCAAAAAAACCAACTATGACTCTTTCGTGGAAATTCCACGGCAAAATATACAGTCTCTAAGTGCAGTTCACACTTTCTGAAATTCTGAATCGGATTGTATTTATTTGCAGAGAAAACGAAAAATAGGATTGGTGCGGTTTTAGCAATAGTTATGCCTGCAATAGCTGCAGTACTGCTCATGGTTGTAGCATGCGTTTGTTGCTGGAAGAGGATCAAGAAGAGACGACCAGAAGAACAGACGTTTCTGTCCTGTAAGTGTGCTAAAAATCATTATATGTTAGCACATCAATAAATGGATAAGTTTGTTGACCGGCAGGGAATTGGTGGTTGAATTGAAAATAGTTTGCTTTTATTTATTTTCATTATCTTGAATCTTAATGCAAGCTGTGTCCCCAGCTTGTAGTGAAATCATATTTCCCTTTTTTTGTTTCCTGAATGAATGAAATCAGACTTGTTGATAAGCTTAATCTTGTTTATCATCTTTGTCCCAACAGATTCAGTTAGTTCAGATGATATTCAGAGCATTGATTCGCTTATACTTGATCTACCAACAATACGAGTTGCTACAGATGATTTTGCTGATACTAAAATGATTGGCCAAGGAGGATTCGGTATGGTTTACAAGGTAGAAAAATCATACCACATGTACCTTTATCAGTTATATTTTTGTCGGTTATATAGTAAGTATCTTTACTTGGATAGGGAGTCCTACCTGATGGCCAAGAAATAGCCGTGAAGAGGCTTTGCCAGAGTTCCAGACAAGGAATAGAAGAGCTGAAAAGTGAGCTGATTTTGGTTGCTAAGCTTTACCACAAGAATCTAGTAAGGCTTATTGGTGTTTGCTTGGAACAGCAAGAGAAAATACTTGTCTATGAATATATGCCAAATAGAAGCCTTGATATCATTCTTTTCGGTACGGTTTTCTCACTAGTAGTTTTTCCAAAAGAAAGAAAGAACAATTATACTAGTGCCAAATGCCGCCAGAGTTATTAGTTACATTACAATGCTATGGTTTTTCTTTGTTTGAGCCTCAGATACCGACAAGAACAGGGACCTAGATTGGGGGAAAAGATTCAAGATTATAAATGGGATTGCTCGAGGCTTGCAATACCTTCATGAAGATTCTCAATTGAAGATAGTGCACCGGGACCTCAAAGCAAGCAACATCCTATTAGACTTTGATTACAGCCCTAAGATTTCTGATTTTGGCTTAGCAAAGATATTTGGAGGGGATCAATCAGAAGATGTCACTAATCGAATCGCCGGAACATAGTAAGCATGATCATGGCCAACATTTATCAAAATTAAGGTAACAAAGTATAATACTAGGTTGTAATGTATTGTTCTTTGTCACAGTGGATACATGGCACCAGAATATGCCATGCGTGGTAATTATTCAATCAAATCGGACGTGTTCAGCTTCGGCGTTTTGGTATTAGAGATTATCACCGGAAGAAGAAACACTGGCTCATATGATAGTGCGCAAGATGTCGATCTCTTAAACCTTGTGAGTACTTCAAGTCTGTTCATGAATAATTAACCAAACTTGTCAACATACATATCACTTGAATAAATCAACCAATTTGGTGCAGGTGTGGGAGCACTGGACAAGGGGAAACGTTGTAGAGCTGATTGATCCATCCATGGGCGACCATCCTCCAATCGAGCAGATGTTGAAGTGCATCCACATCGGGCTGTTGTGTGTTCAGAAAAAACCTGCAAGCAGGCCGACGATTTCGTCAGTAAACATCATGCTTAGCAGCAACACTGTTCGTCTCCCTTCTCTATCCAGGCCGGCCTTCTGCATCCAGGAGGTTAGTGCCAGTGACAGCTCTAATCCGTATTCAGAACGCTATCCAAGACCAAGACATTCCGGGTATTCTGATAATTCAACAGTGGTGTCTTCGAATGATTTGTCAATCACAGAGCTTGTGCCGAGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025888

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025888&oldid=51482"