BGIOSGA025892

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Revision as of 06:36, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025892| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025892, complete gene.| tag = OJ1729_...")
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Gene Name

BGIOSGA025892

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025892, complete gene.

LocusTag

OJ1729_E01.18

Ensembl Transcript ID

BGIOSGA025892-TA

Ensembl Protein ID

BGIOSGA025892-PA

Length

2383

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:19550188..19552570

Sequence Coding Region

19550188..19550496,19550580..19550660,19550751..19551152,19551265..19551429,19551548..19552282
,19552364..19552570

Genome Context

<gbrowseImage1> name=IndicaChromosome07:19550188..19552570 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:19550188..19552570 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGAGAATTCACCGGACAAAGCCAAGAACATCTAGCAAAAATTTTCAAATTTGGACAAACATAGCCCGGACAGCTTCGCTGCTGCCCATCATGATTACAACCTCGTCGCCATCGTCGCAGCCGGTCAGGCTGCAGCAACGATGGACATGCCGGAGCAGGGCGGCGTCTCCTGCTCCTCTTCTTCCACCGCCGGCAACCGGGCGGCGGCGGCGGCGGCGTGTCGCCGCCGACTCCCAGAAGACGGTGGCTTCTCTCCGGGTCCGTGCTATTGCCGCTGAGAGCGAACAGGCTTCTCCTCTACCCGAGCCTCCGCCATTGCTCACCGAGGAGGAGGAAGAGGAGGAGAAGATGCTCGCCAACTACGTCCCCGTCTACGTCATGCTCCCGCTGGGCGTGGTCACCGCGGAGAACGAGCTGGAGGACGCGGCGGGGCTTCGGGCGCGGCTGCGGCGGCTGCGGCGGGAGGCCGGCGTCGACGGCGTCATGGCGGACGTGTGGTGGGGCATCGTCGAGGGCGCCGGGCCGGCGCGGTACGAGTGGCGCGCGTACCGGGAGCTGTTCCGCGTGGCGCAGGAGGAAGGACTCAAGGTGCAGGCCATCATGTCGTTCCACGCCTGCGGCGGCAACGTCGGCGACGCTGTCGCCATCCCGCTGCCGCGCTGGGTCCGTGACGTCGGCGACGCCGACCCGGACGTGTACTACATGAGTCCCGGCGGCGCGAGGAACCATGAGTACCTCACCATCGGCGTGGACAACCGGCCTCTGTTCCATGGCAGAACTGCCATCCAGTTGTATGCCGATTTCATGAAGAGCTTCAGAGAGAACATGGCTGACTTCTTGGACTCTGGCCTGATCGTGGACATAGAGGTTGGCCTCGGCCCTGCAGGTGAGCTGAGATACCCATCCTACCCAGAGAGCCAAGGTTGGGAATTCCCCGGCATCGGTCAGTTCCAGTGTTATGACAAGTACCTGGAGGAGGACTTCAGAGCGGTGGCGACAGAGGCCGGGCACCCGGAGTGGGAGCTGCCGGGCGACGCCGCCGGAGAGTACAACGACACGCCGGAGGACACGCGGTTCTTCGCGGCGGACGGCGGCACGTACCTGACCGAGGCCGGGAGGTTCTTCCTGACGTGGTACTCCAGCAAGCTGCTCGAGCACGGCGACAGGGTCCTCGACGAGGCGAACATGGCGTTCCTGGGCTGCAGCCTCAAGCTCGCCGCGAAGGTGTCCGGGATCCACTGGTGGTACCGGCACCCGAGCCACGCCGCGGAGCTCGCCGCCGGCTACTACAACGTGCCCGGCCGCGACGGGTACCGCCCCGTCGCGCGCATGCTGGCGCGGCACGACGGAGCCGTGCTCAACTTCACCTGCGCAGAGATGCGGGACTCGGAGCAGCCGCCGGAGGCGATGAGCTCGCCGGAGCGGCTGGTGCGGCAGGCGCTGAGCGCGGCGTGGAGGGAGGGCGTCGAGGCGGCGTGCGAGAACGCGCTGAGCAGGTACGACCGGCGCGGGTACAACCAGATGCTGCTGAACGCGCGGCCCAACGGCGTCGGCCCCGCCGCCGCCGGCGGCGGCGCGCCGCCGCGCCGCGTCGCCGCCGTGACGTACCTCCGGCTGTCGGACGAGCTCCTGACGGCGACCAACTTCCGGGCCTTCAAGGCCTTCGTCAGGAAAATGCACGCCGATCAGGATTGCTGCCCGGATCCGGCCCGGTACGGGAGGCCCATGAGGCCTCTGGAGAGGTCTGGGCCGGAGGTGGCCATCGAGCGGCTGCTGGATGCGACGGCGCCGGAGCCGCCGTATCCGTTCGACGGCGAGACGGACATGAGCGTCGGCGGCGGGCTCGCCGAGCTCATCGACTGGGTGTTCGACAAGGTCGAGTGGATATTCTGTTAG</cdnaseq>

Protein Sequence

<aaseq>MPRIHRTKPRTSSKNFQIWTNIARTASLLPIMITTSSPSSQPVRLQQRWTCRSRAASPAPLLPPPATGRRRRRRVAADSQKTVASLRVRAIAAESEQASPLPEPPPLLTEEEEEEEKMLANYVPVYVMLPLGVVTAENELEDAAGLRARLRRLRREAGVDGVMADVWWGIVEGAGPARYEWRAYRELFRVAQEEGLKVQAIMSFHACGGNVGDAVAIPLPRWVRDVGDADPDVYYMSPGGARNHEYLTIGVDNRPLFHGRTAIQLYADFMKSFRENMADFLDSGLIVDIEVGLGPAGELRYPSYPESQGWEFPGIGQFQCYDKYLEEDFRAVATEAGHPEWELPGDAAGEYNDTPEDTRFFAADGGTYLTEAGRFFLTWYSSKLLEHGDRVLDEANMAFLGCSLKLAAKVSGIHWWYRHPSHAAELAAGYYNVPGRDGYRPVARMLARHDGAVLNFTCAEMRDSEQPPEAMSSPERLVRQALSAAWREGVEAACENALSRYDRRGYNQMLLNARPNGVGPAAAGGGAPPRRVAAVTYLRLSDELLTATNFRAFKAFVRKMHADQDCCPDPARYGRPMRPLERSGPEVAIERLLDATAPEPPYPFDGETDMSVGGGLAELIDWVFDKVEWIFC</aaseq>

Gene Sequence

<dnaseqindica>1..309#393..473#564..965#1078..1242#1361..2095#2177..2383#ATGCCGAGAATTCACCGGACAAAGCCAAGAACATCTAGCAAAAATTTTCAAATTTGGACAAACATAGCCCGGACAGCTTCGCTGCTGCCCATCATGATTACAACCTCGTCGCCATCGTCGCAGCCGGTCAGGCTGCAGCAACGATGGACATGCCGGAGCAGGGCGGCGTCTCCTGCTCCTCTTCTTCCACCGCCGGCAACCGGGCGGCGGCGGCGGCGGCGTGTCGCCGCCGACTCCCAGAAGACGGTGGCTTCTCTCCGGGTCCGTGCTATTGCCGCTGAGAGCGAACAGGCTTCTCCTCTACCCGAGGTACCTAGGCACACGCCGAGCGCGCGAACTTTCTTGATTCAAACTGAGTTCCTGCCTCCTGCTGCATTGCTCGTTCACCGCAGCCTCCGCCATTGCTCACCGAGGAGGAGGAAGAGGAGGAGAAGATGCTCGCCAACTACGTCCCCGTCTACGTCATGCTCCCGGTAAGCTCCGAGCTCACGCAATCTCCTCAAGCTTTCGTTCCAACTGATCGTGTCGAGCGGCGCCGCGCCGTGGCGTGGCGTGGCGTGCAGCTGGGCGTGGTCACCGCGGAGAACGAGCTGGAGGACGCGGCGGGGCTTCGGGCGCGGCTGCGGCGGCTGCGGCGGGAGGCCGGCGTCGACGGCGTCATGGCGGACGTGTGGTGGGGCATCGTCGAGGGCGCCGGGCCGGCGCGGTACGAGTGGCGCGCGTACCGGGAGCTGTTCCGCGTGGCGCAGGAGGAAGGACTCAAGGTGCAGGCCATCATGTCGTTCCACGCCTGCGGCGGCAACGTCGGCGACGCTGTCGCCATCCCGCTGCCGCGCTGGGTCCGTGACGTCGGCGACGCCGACCCGGACGTGTACTACATGAGTCCCGGCGGCGCGAGGAACCATGAGTACCTCACCATCGGCGTGGACAACCGGCCTCTGTTCCATGGCAGAACTGCCATCCAGGTACACTGATTTCATAATTTATGACATTGAGATTGCAAATTTACATATCAAAACCATGATCAAATTAAGGATAGTCTAATCGACTTGATCGTTTGTTTATCTGTGACACTAGTTGTATGCCGATTTCATGAAGAGCTTCAGAGAGAACATGGCTGACTTCTTGGACTCTGGCCTGATCGTGGACATAGAGGTTGGCCTCGGCCCTGCAGGTGAGCTGAGATACCCATCCTACCCAGAGAGCCAAGGTTGGGAATTCCCCGGCATCGGTCAGTTCCAGGTAGGATCAATTTCTCTCTACAATGAACATGTAAAATTCTTGATGTTCAAATGGTTCAAATTTGTTAATCAGTTTGTAAAATGTTCAAACTTGAAATTTGAACAAAAAAATGTTGCAGTGTTATGACAAGTACCTGGAGGAGGACTTCAGAGCGGTGGCGACAGAGGCCGGGCACCCGGAGTGGGAGCTGCCGGGCGACGCCGCCGGAGAGTACAACGACACGCCGGAGGACACGCGGTTCTTCGCGGCGGACGGCGGCACGTACCTGACCGAGGCCGGGAGGTTCTTCCTGACGTGGTACTCCAGCAAGCTGCTCGAGCACGGCGACAGGGTCCTCGACGAGGCGAACATGGCGTTCCTGGGCTGCAGCCTCAAGCTCGCCGCGAAGGTGTCCGGGATCCACTGGTGGTACCGGCACCCGAGCCACGCCGCGGAGCTCGCCGCCGGCTACTACAACGTGCCCGGCCGCGACGGGTACCGCCCCGTCGCGCGCATGCTGGCGCGGCACGACGGAGCCGTGCTCAACTTCACCTGCGCAGAGATGCGGGACTCGGAGCAGCCGCCGGAGGCGATGAGCTCGCCGGAGCGGCTGGTGCGGCAGGCGCTGAGCGCGGCGTGGAGGGAGGGCGTCGAGGCGGCGTGCGAGAACGCGCTGAGCAGGTACGACCGGCGCGGGTACAACCAGATGCTGCTGAACGCGCGGCCCAACGGCGTCGGCCCCGCCGCCGCCGGCGGCGGCGCGCCGCCGCGCCGCGTCGCCGCCGTGACGTACCTCCGGCTGTCGGACGAGCTCCTGACGGCGACCAACTTCCGGGCCTTCAAGGCCTTCGTCAGGAAAATGCACGCCGATCAGGTTTGGGCCAATTTTACCAGTTAGTATGGGCTAAATCTAGGCCCATTAAACGAGGCCTGAGAAATGGGCTTCTTTGTGCAGGATTGCTGCCCGGATCCGGCCCGGTACGGGAGGCCCATGAGGCCTCTGGAGAGGTCTGGGCCGGAGGTGGCCATCGAGCGGCTGCTGGATGCGACGGCGCCGGAGCCGCCGTATCCGTTCGACGGCGAGACGGACATGAGCGTCGGCGGCGGGCTCGCCGAGCTCATCGACTGGGTGTTCGACAAGGTCGAGTGGATATTCTGTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025892