BGIOSGA025960

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Revision as of 06:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025960| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025960, complete gene.| tag = OSJNBA0...")
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Gene Name

BGIOSGA025960

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025960, complete gene.

LocusTag

OSJNBA0090H18.33

Ensembl Transcript ID

BGIOSGA025960-TA

Ensembl Protein ID

BGIOSGA025960-PA

Length

3105

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20756951..20760055

Sequence Coding Region

20756951..20757344,20757920..20758108,20758637..20758818,20759145..20759290,20759377..20759641
,20759723..20760055

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20756951..20760055 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20756951..20760055 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCTCCGCCGCCGACGCGATGCCTCCCCGTCCTCCTCCTCCTCCTCCTCGTCGTAGCGCCACTCCTCGCGCATGGCCGCCGCCCCTTCATTTCCGACGGCGGCAACGCTAACGCTAACGCGAACGCGAGCGTGCTGCGGCTGCCGTCGGCGGCGGCGGCGGCGGGGGAGGACATAGGCTGCGAGATGTCGTACGGGTTCCTGCCGTGCACGACGACGGCGTGGGGGAACCTGTTCCTGGTGCTCGCCTACGGCTTCCTCATGTTCAAGTCCGCCACCTACCTCTCCTCCGGGAGCGAGATGCTGCTCCAGATCCTCGGCCCCGGCATCGTCGGCGGCCTCTTCCTCCCCATCCTCGGCGCCCTCCCCGACGCCCTCCTCATCCTCGTTTCTGGGCTCTCTGGCACTAAAGAGGTTGCTCAGAGTCAGGTCTTGATTGGAATGGGCCTGCTCGCGGGGTCAACGGTTATGCTCTTGACCCTACTCTGGGGATCTTGTGTTGTTGTTGGCAAGTGTGATCTGTCAGAGAATTCAACCGCAATCGATTCACGGGATACCAAAGGCTTCAGTCTATTAGGCTCTGGTGTTTCAACTGATAAGCAAACCAGCTATGCAGCAAGAATCATGGCGATATCTATTCTCCCCTTTATTATTGTTCAAATACCGAAGATTTTTAAGCTCCATTCTGGTCATCAGATAACAGTCCTTATTGGACTTATAGTGGCAGCTCTACTCTTGCTTTCTTATTGTCTATATCAGGTCTTTCAGCCATGGATCCAGAGGAGAAGATTAGAGTATACAAGACTGAAGCATGTAATGTCTGGACTTCTGAGACATGCTCAAAAGCATTCAATTGGTCGCCTTCTTGACGATGAGGGAAGACCTAATGTTTCGGTGATAGAGAAGTTATTTCACAGGATTGATCAGGACAATGATGGAAAGCTAGAACGCGGCGAATTACAAGCTTTCATCGTTGGTATTAACTTTGAAGATATTGACTGGAACAGTAACCTTGCTGCAGATCAAGTCATGGCTGACTTTGATACATCACGGAACCATTTTATTGAAAAGGGTGAATTTGTTAATGGAATGTTGAGATGGCTGGATGAAGCTAAGCGTACTGTTACATCTGGTGCCTACTCAAAAAAGTTCTTGAATGATTTTCATGCGAGAACAAGGGATGAACAAACCGGTCTGCTCGACAAGGATGAAGAGGAAGGTGAAGCTGATGGAAATCCAACCTGGACTTGCATTAAGGCCATCTTACTTTTGCTTCTGGGAACTGCAATGGCAGCAGCATCTGCAGATCCTCTTGTTGATGCTGTGCACAATTTCTCAAATGCTACACATATTCCCTCCTTTTTCATCTCCTTCATTGTAATGCCCTTGGCTACTAATTCCAGCGAGGCTGTCTCAGCAATTATATTTGCTAGCCGGAAGAAGAAACGGACTTTGTCACTAACCTTCTCTGAGGTATGTCTATTGAGTATCTTGTACAACTGA</cdnaseq>

Protein Sequence

<aaseq>MAPPPPPTRCLPVLLLLLLVVAPLLAHGRRPFISDGGNANANANASVLRLPSAAAAAGEDIGCEMSYGFLPCTTTAWGNLFLVLAYGFLMFKSATYLSSGSEMLLQILGPGIVGGLFLPILGALPDALLILVSGLSGTKEVAQSQVLIGMGLLAGSTVMLLTLLWGSCVVVGKCDLSENSTAIDSRDTKGFSLLGSGVSTDKQTSYAARIMAISILPFIIVQIPKIFKLHSGHQITVLIGLIVAALLLLSYCLYQVFQPWIQRRRLEYTRLKHVMSGLLRHAQKHSIGRLLDDEGRPNVSVIEKLFHRIDQDNDGKLERGELQAFIVGINFEDIDWNSNLAADQVMADFDTSRNHFIEKGEFVNGMLRWLDEAKRTVTSGAYSKKFLNDFHARTRDEQTGLLDKDEEEGEADGNPTWTCIKAILLLLLGTAMAAASADPLVDAVHNFSNATHIPSFFISFIVMPLATNSSEAVSAIIFASRKKKRTLSLTFSEVCLLSILYN</aaseq>

Gene Sequence

<dnaseqindica>1..394#970..1158#1687..1868#2195..2340#2427..2691#2773..3105#ATGGCGCCGCCTCCGCCGCCGACGCGATGCCTCCCCGTCCTCCTCCTCCTCCTCCTCGTCGTAGCGCCACTCCTCGCGCATGGCCGCCGCCCCTTCATTTCCGACGGCGGCAACGCTAACGCTAACGCGAACGCGAGCGTGCTGCGGCTGCCGTCGGCGGCGGCGGCGGCGGGGGAGGACATAGGCTGCGAGATGTCGTACGGGTTCCTGCCGTGCACGACGACGGCGTGGGGGAACCTGTTCCTGGTGCTCGCCTACGGCTTCCTCATGTTCAAGTCCGCCACCTACCTCTCCTCCGGGAGCGAGATGCTGCTCCAGATCCTCGGCCCCGGCATCGTCGGCGGCCTCTTCCTCCCCATCCTCGGCGCCCTCCCCGACGCCCTCCTCATCCTCGGTACTCCCTCCCCTCCCCTTCCCTTCCCTTCCTCACTTTGCACAACTCGATCGCTCGCGTGGTGGGATCCGCGCTGCTGCTGCTGCTGCTACTACTACTACTACTACTCTTGGCCGTGACCACGAGAGAGATTAAAAAGGTCCACCTTGGACTGTTTCATGCTAGCAACGATCACCTTTATCGCTTGATTTGATATGCAAGGTGACGTGATCGTTGAGATTCACTTCACCACAAGATGCTTAATTAGCTTCAGCTGATGACAAGATGCTTAGCTTTGCTCTGGTTTTATTGGATGAATGGTACCAAAACAATAATCGAATGAGTACATCATTATGGATTTTATGGGCCCTTGAGATGAGGTCCCATAAAACGCCAAGATAGTTAGCAAGGAGCTACTCAACTAACAGCTGGTTAGTCCTTTTTTCTTGTGTCCAGCTGAGTTAAGCTTGCACAAATACCTATAAATAGACCATGATGTCATACGTTGTTGCACCATTCTACATGATGGATTTGAGTTGCATGTGCAAGTGTGCATGCAAATTGCTTAACTTGGTCCCCCATTTGTTGCATTTCAGTTTCTGGGCTCTCTGGCACTAAAGAGGTTGCTCAGAGTCAGGTCTTGATTGGAATGGGCCTGCTCGCGGGGTCAACGGTTATGCTCTTGACCCTACTCTGGGGATCTTGTGTTGTTGTTGGCAAGTGTGATCTGTCAGAGAATTCAACCGCAATCGATTCACGGGATACCAAAGGCTTCAGTCTATTAGGTATGCCACATACTCACTTTGTGTTTCATTCTCTTTTGTTAATCTTGTTCCATTATGGATCTAGATTTGCGGAACATCCTTTTACCTGAACAAGAAATCTGTTTTTAATTTGCAACAAGGCCATGCTGGGCTCATGGCAGGTGGTTGTGACTTTTAAGTTCAGTTGAAAATTTGGTGTACGAGCTTGCCTGCTGACATATTGATACGGTTATTAGGGCTTAGCTTTCAAGAATGTGATGCCCCACATGCCTAACAATGTAGTTATCTTGATAGGAGCTGCTGGCCTTCAGTTTGGCTTTAAGTTTTTTGATAAGATGACATACATCATGAAAAAATATATGTTTTCCTTTACCTTCTGTACTTGGATTTGACACATGAAGTTTCTACGTGGTATCAGCATTATGTTGGGAGGATTTCGTGTTGTTCTTTTCTCAACTTAATCAAATTTGCATAGTGTGAATTGGTAGGCATATCCTGCATTATATCATTATAATATTAGTTAAAAGAATAACATCTATGTTAATTCAGGCTCTGGTGTTTCAACTGATAAGCAAACCAGCTATGCAGCAAGAATCATGGCGATATCTATTCTCCCCTTTATTATTGTTCAAATACCGAAGATTTTTAAGCTCCATTCTGGTCATCAGATAACAGTCCTTATTGGACTTATAGTGGCAGCTCTACTCTTGCTTTCTTATTGTCTATATCAGGTATTGTAATGACCTTGGTATATATACTTTATGCCTTGCCATCCTTTTGTTTTGGTTTGTGTCACCTATGTAATTTTGTCTTAAAAGATTAGTAGAAATATTCTTGCATCAACACACTTGATGACTCGTAAAACATAGTTTTGAATCAGAATAAATGGTGCCCTTCTCCAACAAAATTTGTCAGGAAATGAAACCGGGTCACAAATATCTGTAGTTTCATTATAGGTTCTGGTTTTTTTCTGGGGACAACTATACATTGCTATCGTTGACTACATTCATATTTTAATCTACATTGCCCATTAAAGACTTGCATTTTTCACAAACAGGTCTTTCAGCCATGGATCCAGAGGAGAAGATTAGAGTATACAAGACTGAAGCATGTAATGTCTGGACTTCTGAGACATGCTCAAAAGCATTCAATTGGTCGCCTTCTTGACGATGAGGGAAGACCTAATGTTTCGGTGATAGAGAAGTATGTTTCTGTCCTCACCCACATGGTTTTTTTAGCTATATTTCATAAAGAGGTGCTCTGTTAAATGAAAACCGAAAAATTGGCAGGTTATTTCACAGGATTGATCAGGACAATGATGGAAAGCTAGAACGCGGCGAATTACAAGCTTTCATCGTTGGTATTAACTTTGAAGATATTGACTGGAACAGTAACCTTGCTGCAGATCAAGTCATGGCTGACTTTGATACATCACGGAACCATTTTATTGAAAAGGGTGAATTTGTTAATGGAATGTTGAGATGGCTGGATGAAGCTAAGCGTACTGTTACATCTGGTGCCTACTCAAAAAAGTTCTTGAATGATTTTCATGCGGTATGTTTTTTCTATCAGCTTTTTTGTTGTAGAGTTGATTTATCATGGAAAGATAAATTTCAGCATCTCACAATGTTTCAGAGAACAAGGGATGAACAAACCGGTCTGCTCGACAAGGATGAAGAGGAAGGTGAAGCTGATGGAAATCCAACCTGGACTTGCATTAAGGCCATCTTACTTTTGCTTCTGGGAACTGCAATGGCAGCAGCATCTGCAGATCCTCTTGTTGATGCTGTGCACAATTTCTCAAATGCTACACATATTCCCTCCTTTTTCATCTCCTTCATTGTAATGCCCTTGGCTACTAATTCCAGCGAGGCTGTCTCAGCAATTATATTTGCTAGCCGGAAGAAGAAACGGACTTTGTCACTAACCTTCTCTGAGGTATGTCTATTGAGTATCTTGTACAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025960