BGIOSGA025966

From RiceWiki
Revision as of 06:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025966| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025966, complete gene.| tag = OsI_265...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025966

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025966, complete gene.

LocusTag

OsI_26525

Ensembl Transcript ID

BGIOSGA025966-TA

Ensembl Protein ID

BGIOSGA025966-PA

Length

3767

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20868475..20872241

Sequence Coding Region

20868475..20868574,20868666..20868819,20868991..20869062,20869152..20869223,20869398..20869466
,20869553..20869725,20870256..20870626,20870786..20870912,20870983..20871051
,20871231..20871420,20871588..20871720,20871891..20872241

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20868475..20872241 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20868475..20872241 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCCGCCCGCTTCGGCCCCCTCCTCCTCGTACTCCCCCTCTCCTCCGCGCTGCTCGTCCTCTCCGCCGCCACGGCGCCCCGTGGCCGTCCCAGCCAAGTGGATGTGGGGAGGCAGCTGAGGGAGGAGCTGTGGGAGAGAAACCAAGGGCACGAGATGCTCAGGTCGTGGCGCGACGGTGACCCGTGCTCGCCGTCTCCATGGGAAGGGTTCTCTTGCCGATGGAAGGACGGCAACCTCTTCGTTGTCAAGCTGAACTTTTCTTCAAAGAAACTGCAGGGGCCGATTCCCGCCGCGATTGGTAACTTAACAGAACTAGATGAGATTGATCTGCAGGACAACAACTTCACTGGTTCTATTCCAGAATCTTTCTTTGATCTCACACACTTGCTGAAGCTGTCAGTAAAGTGCAACCCCTTCTTGAACAATCAGCTACCTCATGGCCTATCTATCAGCGTGGAATTTAGCTATGGAGGCTGCGCTTATCATAGTCCACCTGGAGCTTCCAATCAGAGAATAGCTGTTATTGGTGGTGTTGCCGGAGGATCTTTGGCATGCACTTTTGCACTTGGATTTTTCTTCGTTTGTTTCAACAAACGTGAAAAGAATCCTCAGAAAAAAGACTGCTCTTCTACAAGAAATCCTGTTTTTGAAGAATGTAGCACCCACAAAGCTACAAACTCTGCAGTACAACAGTTATCCCTTAAATCAATCCAGAATGCAACGTGCAACTTCAAAACCTTAATAGGGGAGGGTGGGTTTGGATCAGTTTATCGAGGAACATTAGCACATGGTGAAGAAGTTGCAGTAAAGGTTCGTTCAACCTCGTCGACGCAGGGAACACGTGAATTCAACAATGAGGTACAGATGAAACCTGCCCCTGCTAGTATAAAGGAATCTTGTTGTGGGCTTGGGGTGAATCAAATTCTAAAAAAGTTGTTCATTGTGTTGCATTCTGGTAAAGAAGCTAAATATGGATTCTTTGGCCGTAAATTCAAGAACAAGGAAATGTTGAGGCTGCTTTCTGCTGTGCGGCATGATAATTTGGTCCCACTAATTGGATATTGCTGTGAAAAGGATCAAGAAATTTTGGTCTATCCATTCATGTCCAATGGTTCTCTACAGGATCGCCTCTACGGTGAGGCGTCAAAAAGGAAAGTTCTTGATTGGCCTACCAGACTATCTGTTTGCATTGGTGCTGCTAGAGGACTAGCACATCTGCACGGTTTTGCTGGCCGCTGTATCATACACAGAGACGTTAAGTCCAGTAACATACTTCTGGACCACAGCATGTGTGGCAAGGTTGCGGACTTCGGTTTTTCTAAGTATGCACCTCAAGAAGGTGACAGTAATGCATCAATGGAAGTCAGGGGAACTGCTGGATATTTAGACCCTGAATACTATTCGACTCAGTCATTATCAACCAAAAGTGATGTGTTCAGTTTTGGAGTGGTTCTCTTAGAAATTGTAACCGGAAGAGAACCTCTTGATGTTCAGAGGCCTAGGGATGAATGGAGCTTGGTTGAATGGGCTAAACCATACATTAGAGAATACAGAATTGAAGAAATCGTTGACCCTGGCATAAAAGGGCAATATTGTTCAGAGGCCATGTGGAGGGTTCTTGAGGTCGCATCAGCATGCACTGAACCTTTCTCGACCTTCCGGCCAAGCATGGAAGATGTTGTCAGAGAGCTAGAGGACGCTCTGATAATCGAGAACAACGCTTCAGAGTACATGAGGTCCATCGAAAGCACGGGGACACTTGGCTCCAACCGCTACCTGTCCATTGATAGGAAGATGTTTGCATCGGGTTCAGCTCGATTCGCATCATTTGACGCTACGAAAGGGCATTTGCAAACGATGCCTTCGCTTCCGGGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAARFGPLLLVLPLSSALLVLSAATAPRGRPSQVDVGRQLREELWERNQGHEMLRSWRDGDPCSPSPWEGFSCRWKDGNLFVVKLNFSSKKLQGPIPAAIGNLTELDEIDLQDNNFTGSIPESFFDLTHLLKLSVKCNPFLNNQLPHGLSISVEFSYGGCAYHSPPGASNQRIAVIGGVAGGSLACTFALGFFFVCFNKREKNPQKKDCSSTRNPVFEECSTHKATNSAVQQLSLKSIQNATCNFKTLIGEGGFGSVYRGTLAHGEEVAVKVRSTSSTQGTREFNNEVQMKPAPASIKESCCGLGVNQILKKLFIVLHSGKEAKYGFFGRKFKNKEMLRLLSAVRHDNLVPLIGYCCEKDQEILVYPFMSNGSLQDRLYGEASKRKVLDWPTRLSVCIGAARGLAHLHGFAGRCIIHRDVKSSNILLDHSMCGKVADFGFSKYAPQEGDSNASMEVRGTAGYLDPEYYSTQSLSTKSDVFSFGVVLLEIVTGREPLDVQRPRDEWSLVEWAKPYIREYRIEEIVDPGIKGQYCSEAMWRVLEVASACTEPFSTFRPSMEDVVRELEDALIIENNASEYMRSIESTGTLGSNRYLSIDRKMFASGSARFASFDATKGHLQTMPSLPG</aaseq>

Gene Sequence

<dnaseqindica>1..100#192..345#517..588#678..749#924..992#1079..1251#1782..2152#2312..2438#2509..2577#2757..2946#3114..3246#3417..3767#ATGGCCGCCCGCTTCGGCCCCCTCCTCCTCGTACTCCCCCTCTCCTCCGCGCTGCTCGTCCTCTCCGCCGCCACGGCGCCCCGTGGCCGTCCCAGCCAAGGTATGGGAGGGTTGTGGATTGTTCACGATCGTGTCTGTGCTAGAGATTTGTTGTTGTTGTTGCTGCTGCTTCGCTGACCACCTTGTTGCAGTGGATGTGGGGAGGCAGCTGAGGGAGGAGCTGTGGGAGAGAAACCAAGGGCACGAGATGCTCAGGTCGTGGCGCGACGGTGACCCGTGCTCGCCGTCTCCATGGGAAGGGTTCTCTTGCCGATGGAAGGACGGCAACCTCTTCGTTGTCAAGCTGTGAGTTCCCTGAATCCCTCGTTCTCACTCTCACGATCACGGCCATCCATTGGTGCTATTCATTCGGCTTTGATGAGAATTTATTTGGTCGTTCCTTTGAATTTGTTATATATGCAAGTATGAATTTGAGTTGAATTGCAACTAATGTGGTACATACTGATGTCTTTGCAGGAACTTTTCTTCAAAGAAACTGCAGGGGCCGATTCCCGCCGCGATTGGTAACTTAACAGAACTAGATGAGATGTATGTTTCACTAATCTTTTTATTCCAAGTGTATTTTCGTGCTATCTCAGATGCTTGTTTTATATTCTTATTATTAATTGTGGGTGCAGTGATCTGCAGGACAACAACTTCACTGGTTCTATTCCAGAATCTTTCTTTGATCTCACACACTTGCTGAAGCTGTAAGTAGATGCTGTTCTTTACCATTTGCTCTTACAATAAAAAAAATGACTATGCACAAATTCCTTGTGTCATTCTGGGATATCAAGAGTTTTACATAATTTAGATCATGCTGGTTTCAGTTGATATACATCTCACATATGGACATGTCTTATTAAACATGATCATTTGTCCAGGTCAGTAAAGTGCAACCCCTTCTTGAACAATCAGCTACCTCATGGCCTATCTATCAGCGTGGAATTTAGGTGAGATATCTGTTCTGATGTTCAACGTATATGATCTTGAGTGGCAGTAACATAATTGTACTAAACTTGCTTATGGAATATAAAAGCTATGGAGGCTGCGCTTATCATAGTCCACCTGGAGCTTCCAATCAGAGAATAGCTGTTATTGGTGGTGTTGCCGGAGGATCTTTGGCATGCACTTTTGCACTTGGATTTTTCTTCGTTTGTTTCAACAAACGTGAAAAGAATCCTCAGAAAAAAGACTGCTCTTCTACAAGAAGTACGCACCCTTCTACACAAGTTTGTTCCCTTATGCTTAATTTAGATAGTACTCACTCTGTCCCAAAATATAGCAAACTAGTACCGGATTAGACACAACCTATTAATACATATCCAGATTCGTGGTACTAGGTTATATCAAATCCGATACTAAGTTCATATATTTTGGGACAGAGGTAGTAGGTGTTTTACACTCTTGCAAGTCTCTTTTTGCTGTTTCATTTGCATTTATGTGTCCGTATGTGCATTTCGTGTGCATGCGATAAGAAGCCTTCATTTGGTAGATGAAGCCGCTCTTATATATGTCTCACACTTTGTTAGATGAACATGCATGGTAGTAGGCCTTGAAATTTGAGAGCCGTGTAGTAAACAGGTTTATCCAATTTTTGCTCTTTGATGGAGGCTCATCAACAGAAGTAGGAGCTGCATTCATCAGTTCATCGTGTCCTATAAAATAAAATACACCTCATAATCACTTATTGTCTAAATACTCAAAACACCAATAAATTCTTTCTATAATGTTGTATGCAGATCCTGTTTTTGAAGAATGTAGCACCCACAAAGCTACAAACTCTGCAGTACAACAGTTATCCCTTAAATCAATCCAGAATGCAACGTGCAACTTCAAAACCTTAATAGGGGAGGGTGGGTTTGGATCAGTTTATCGAGGAACATTAGCACATGGTGAAGAAGTTGCAGTAAAGGTTCGTTCAACCTCGTCGACGCAGGGAACACGTGAATTCAACAATGAGGTACAGATGAAACCTGCCCCTGCTAGTATAAAGGAATCTTGTTGTGGGCTTGGGGTGAATCAAATTCTAAAAAAGTTGTTCATTGTGTTGCATTCTGGTAAAGAAGCTAAATATGGATTCTTTGGCCGTAAATTCAAGAACAAGGAAATGGTAGCATCATCAGTTGTCATATTGTTGATAACTTTGCATCAACAATCAGTTCTGTTTGAAAGAATACATTAATAATTAGTTGTTTAGTTTTTCAGTATTTATCTACTGAAATCATTGTTTTATGCAAAGTTCTGATCATCAATCAATCAATTGACACAGTTGAGGCTGCTTTCTGCTGTGCGGCATGATAATTTGGTCCCACTAATTGGATATTGCTGTGAAAAGGATCAAGAAATTTTGGTCTATCCATTCATGTCCAATGGTTCTCTACAGGATCGCCTCTACGGTATGAAGTTTCATTAGATTTAATCACTTTCAGTTTAAGACCCTTCTTTGATAAATAATATATTTCTTAGGTGAGGCGTCAAAAAGGAAAGTTCTTGATTGGCCTACCAGACTATCTGTTTGCATTGGTGCTGCTAGAGGTTAGCATTTAGCACTGTCTTTTTTGTCTGGAAAGGCCTCATCCCATTGTTTTTATTGTGATTGAAGAAAATCCTTTCTGTGCAATTCAGGGACATAAGTTACTCCGCAAATGTCTCAACATTGCAAACGCTTTCTATCATTTCTTTTACATGATCGAATGCTTGTTTTGCTTGTTCAGGACTAGCACATCTGCACGGTTTTGCTGGCCGCTGTATCATACACAGAGACGTTAAGTCCAGTAACATACTTCTGGACCACAGCATGTGTGGCAAGGTTGCGGACTTCGGTTTTTCTAAGTATGCACCTCAAGAAGGTGACAGTAATGCATCAATGGAAGTCAGGGGAACTGCTGGATATTTAGACCCTGAGTAAGTTTTTTCATTGCTTTCACAAAGGAACAAAACTTTTCTTTCTTTTCTTCTATATAACAATCAATTATCAATGCATTTGTTAGTTGAAATGCCTACCTGTCTTGTTCCCTGCATATATTATGTGATTCAACATCCGGCTTATCAATTATGCGTCTTTCTTTCAGATACTATTCGACTCAGTCATTATCAACCAAAAGTGATGTGTTCAGTTTTGGAGTGGTTCTCTTAGAAATTGTAACCGGAAGAGAACCTCTTGATGTTCAGAGGCCTAGGGATGAATGGAGCTTGGTTGAATGGGTAAGTTCTCATTGCGGACCAAGTGACCAACCACCAATCACTTATCTATCAAAACAAATCTCTCTCCTCAAAGAAAAAAAAAAGTGAAATCTCATTTGTTCGGACACCTGCACAAAATGATTTCTAGCCACTACAATTCTAACATGTCTTACCCTGGTTTGCAAATGTAGGCTAAACCATACATTAGAGAATACAGAATTGAAGAAATCGTTGACCCTGGCATAAAAGGGCAATATTGTTCAGAGGCCATGTGGAGGGTTCTTGAGGTCGCATCAGCATGCACTGAACCTTTCTCGACCTTCCGGCCAAGCATGGAAGATGTTGTCAGAGAGCTAGAGGACGCTCTGATAATCGAGAACAACGCTTCAGAGTACATGAGGTCCATCGAAAGCACGGGGACACTTGGCTCCAACCGCTACCTGTCCATTGATAGGAAGATGTTTGCATCGGGTTCAGCTCGATTCGCATCATTTGACGCTACGAAAGGGCATTTGCAAACGATGCCTTCGCTTCCGGGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025966

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA025966&oldid=51560"