BGIOSGA025970

From RiceWiki
Revision as of 06:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025970| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025970, complete gene.| tag = OsI_265...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025970

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025970, complete gene.

LocusTag

OsI_26535

Ensembl Transcript ID

BGIOSGA025970-TA

Ensembl Protein ID

BGIOSGA025970-PA

Length

4589

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:20923983..20928571

Sequence Coding Region

20923983..20924178,20924320..20924426,20924708..20924766,20925344..20925683,20925819..20927169
,20927229..20928571

Genome Context

<gbrowseImage1> name=IndicaChromosome07:20923983..20928571 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:20923983..20928571 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGGCGTCGGGATCCGAGCCGGGGCGGCCATGGACGGTGTCCGCCACCTGGGCTCCGGCTGGTGGCGCGGCCGTGGAGGACGCCGTCTCGTTCGAGACGTCCGCCGACGACGCGGAGGCCGTCCCCTCCGCCGTCTTCCTTGAACGCCCTTCCCCCGATGGCGACGGCGAAGCTCCTCCCTGCGAGGTCACTGCATCTAGTCTAGCTTATGGTCGGATAAACCCTAGTAGGCTGGTAGAACCAACCGAACCTAGTAGGCTGGTAGAATCAACCGAAGTGGTTATCGCTGTTCGAGTTCTAGAAAATATCTGGCTAAGTTTTTACTACTTTAGATTTGATTTTTCCATCAGTGGTAAGCGGGGAAAGTATGAGATTCACAGGGTGTATGTGCGAAGCACAGCTCGGATTTATGAAATATACTATACAACTGACCCCAAGGATAGCTCTAAGGATTATCTATGCACTGTGCGTTGTGGACCTGCAGTTAAAGAGCCACTCCCCTCTGCTGAAGAAAGTATGCCCCAATGGAGTAGTGATGCCTCAACTAGTGAAAAGCATGAGCATGAAACCAAAAGCGTAAGCAGTAGTATTGATGAAGATAGCTGGGTTGATGTCAAAATCCCAGAGTTACATGTGGAAAAGAACAGATCTAAATCTCAAGAACCTAATGCAATTGGAGCCAAACAGGAAACCACTCTGGCACACTATGAAGCAACTGCTGAGATAACTGATGCAAGCCCATGTGTATCTCTAACTGTTCGCCTCCTTTCACTTCAGTCAAAAACATCAGTGCACATCGAGGAGATTTACATATTTGCTGATCCTGTTGAGCCAACCAATGATGAATCAGAAACACGTCCTGGAAACATGGGAGGTAGTTCTTTGTTGGCTATGCTTGTCCCTAGCCTCATGCAAATGTCCAAATCAAGGAACCAGAAAACGGACAATAAATATTTTTCTGATGCCTCAAGGACTCAGCTTTCCCAAGGTTGTGCAATGGCAGTGAATAATAGTCCATGTGAAAATGTAGTGCGAGATGCAGAGCCGTGTAGCACAGATGATTTAAATTTCAAGTCAGCAGGGATGGAAAGCAAACTAAATGCTATAGATGGCGATACAATAACTTATGAAAAAGGCAACCATTATGAGCTAAAGGATTCCAAGTCTATTCTATTGCCTATACAAACAACAGAAAATACACAAGCTCCTTTGACAAAGAACCAGAGTGTGTCAAATACAGATCAGCCTGTTACTCCTCTCATGGATGAAAATCCAAATCCTTACAGTCGCATTGAGGGAAAGCTGGATACTCTTCTCTCTAAGATGGAGAAGATGGAACTATACTGCTCCAGGTTTGACGATGGTATGATGAGGCCTATCTGTAGCATCGAGTCAAGGCTTCAGCGATTGGAACAACAGTTTGATGTGTTCTCTATGGAGATTAAGACTTTACAAGCTTCTTCTGCAAGAATGACAGCCCCAGATGGTTTATCTGATATGATTAATCCACAGGATAAAACAGATAATGATGGTAAGGCTGAAAATTCTGCTTCCACAACCAACAGGCAGCCAGGTCTGGTTGTCAGAGCACCAGAGTTTTCTTTAGAAGAATCCTTCAGTTGCGATAAGTCCAATGAAAATGCAGTTACCTTACGTGGACCGAGCATGGTGCCAAGGCTTCTTGTTAAGGCTCCTGATTTTGTTTCTGAATCTGAGTTTGCTTGTGAGAAGCTTCATGATGGGTCTTTCTCACCAGTTGATTTTGCTCTGTCTTCTGAGAAAGAACCTAAAACTTCCCCAGGTTTAGTTGTCAAGGTTCCAGAATTTCCAAATGATTCAGATGATGAATTGGAGGAAGAGAAAGAAACAGAAGTTGGTGATCATGATGATGGTCATACAAAATCTGATGCTGCTTTGAGTGAAAGCACTGTTGACAGCTTCAAAAGCAAATCTCATGTATCTGTCGATGGTGCTCTAGCATCAGCCTTGGAGGCACTTCTTGGTTCAACCAAGAAAACACCATCTTCGCAATCTGCTGCTTGCCCTGCCATTGATGAGACATCCACTAATGATGGCTCGGCTGGCCAATTATCTGGTACATTCGTTGATGCAAATAAGGTCAATACCTTCATATCTTGTGAGGAAGCAGATGCAGTTCCACAAACTTATCTCTCTAAGGCAAACTTGAAGGCTGAGGTAAACGATCTGAATAATGTTCTCGATTTGAACATGATGGCATTTGCTGAAAGCACAGAACCCTTGTGTGTTCCACAGCTTCACACAGTTGAGGAATCTAAAGATGTTGGAAGCCAAGCAAATCTAAAGAATAATGGCTCTAGTTCATACATGATGCAATCCATTGCAAACACTGAGCACATCATCGCTCCTTCTCAGCTTCCTACTGTCTTGGAATCTATTAATGATGGACAACAGTTGAATGGCAACAGATCTACCTTGTCCTTGGCAGAGTTTCTTGTGGCAAGAAATGCTAACTTTAGTAAGAATGTGATTTCTGAAGCATTATCTAGTAATGGTGGTGCTGAAATGCATACCTTCAAGAGAACATCGATGGAATCTGCTAAGAATATAAAGGATATCAATCAACTTCTGCTGCAGAAAGCTCTAGAGGTTAATGAGGATGACAGTGCTAAGTTTTCTGTTTCTGGTGGGATGAACTCTTGTTGTCTTAGAGCCTTTACTGATTCCAAGAAAAGATGCATTGAGAGCAGCGGCTTGGAGGCAAGCCTCAATGATAACTTTACAAAATCAGAGGTAGAGCACTCCTTGTCAGATTTGTGTAGTATGGAGTCATTTAGTGCAGAACCTGCTAGAGAAGCTGTCGGCTCAGGTGGTGTCACAGCTGAAAATTGTGTTGATGATCCTTTTACAGGTAGTTCTACTGTAAACCCAACTGCAGGCGAAGAGCTGCAAAAGGTGTGTGACTTGCTTTACGAGTACAATGATGATGTTTTAGGCATGGCTTTCGTGGCAAAGAAAACAAGTAAGAGCAGCCCTTCTCTCGAAGTCCTACTTGCTGAATCATCTGATTCGGAAGCGGAAATTTCTGATGCGAAGGACACTGACAATGATGCTGGCTTAAGTTCAGCTAGGTTGTTTAGTACATTCTCGTCTTCAGATGATGAAGCTCCTCGCACTGATGAACCTATAATTGATGTAGTTGATCTGCCAACACCATTGGATGCATATGCTTCTTCCAAGAACGAGCTGGTTGATGATGAGTCTTTGCTTGATATGGATGATCCGCCAATTCCTCCAGAGTCGTATGCTTCTGTCCTAAGCGACATGCATCATGCATGTCTAAATGATCAATCAAAACCTTCAGGGACATTCGCTGAAGAGGGCAATGGAGAGTATCCTGACAGCCTTATATAG</cdnaseq>

Protein Sequence

<aaseq>MEASGSEPGRPWTVSATWAPAGGAAVEDAVSFETSADDAEAVPSAVFLERPSPDGDGEAPPCEVTASSLAYGRINPSRLVEPTEPSRLVESTEVVIAVRVLENIWLSFYYFRFDFSISGKRGKYEIHRVYVRSTARIYEIYYTTDPKDSSKDYLCTVRCGPAVKEPLPSAEESMPQWSSDASTSEKHEHETKSVSSSIDEDSWVDVKIPELHVEKNRSKSQEPNAIGAKQETTLAHYEATAEITDASPCVSLTVRLLSLQSKTSVHIEEIYIFADPVEPTNDESETRPGNMGGSSLLAMLVPSLMQMSKSRNQKTDNKYFSDASRTQLSQGCAMAVNNSPCENVVRDAEPCSTDDLNFKSAGMESKLNAIDGDTITYEKGNHYELKDSKSILLPIQTTENTQAPLTKNQSVSNTDQPVTPLMDENPNPYSRIEGKLDTLLSKMEKMELYCSRFDDGMMRPICSIESRLQRLEQQFDVFSMEIKTLQASSARMTAPDGLSDMINPQDKTDNDGKAENSASTTNRQPGLVVRAPEFSLEESFSCDKSNENAVTLRGPSMVPRLLVKAPDFVSESEFACEKLHDGSFSPVDFALSSEKEPKTSPGLVVKVPEFPNDSDDELEEEKETEVGDHDDGHTKSDAALSESTVDSFKSKSHVSVDGALASALEALLGSTKKTPSSQSAACPAIDETSTNDGSAGQLSGTFVDANKVNTFISCEEADAVPQTYLSKANLKAEVNDLNNVLDLNMMAFAESTEPLCVPQLHTVEESKDVGSQANLKNNGSSSYMMQSIANTEHIIAPSQLPTVLESINDGQQLNGNRSTLSLAEFLVARNANFSKNVISEALSSNGGAEMHTFKRTSMESAKNIKDINQLLLQKALEVNEDDSAKFSVSGGMNSCCLRAFTDSKKRCIESSGLEASLNDNFTKSEVEHSLSDLCSMESFSAEPAREAVGSGGVTAENCVDDPFTGSSTVNPTAGEELQKVCDLLYEYNDDVLGMAFVAKKTSKSSPSLEVLLAESSDSEAEISDAKDTDNDAGLSSARLFSTFSSSDDEAPRTDEPIIDVVDLPTPLDAYASSKNELVDDESLLDMDDPPIPPESYASVLSDMHHACLNDQSKPSGTFAEEGNGEYPDSLI</aaseq>

Gene Sequence

<dnaseqindica>1..196#338..444#726..784#1362..1701#1837..3187#3247..4589#ATGGAGGCGTCGGGATCCGAGCCGGGGCGGCCATGGACGGTGTCCGCCACCTGGGCTCCGGCTGGTGGCGCGGCCGTGGAGGACGCCGTCTCGTTCGAGACGTCCGCCGACGACGCGGAGGCCGTCCCCTCCGCCGTCTTCCTTGAACGCCCTTCCCCCGATGGCGACGGCGAAGCTCCTCCCTGCGAGGTCACTGGTGAGTCGTCGTTTTTGACTTGGGGGGTAGCTTAGCTCTCTGGGCTTGTCAGAATTTTGCGAGTTTGCCGCGGGATCGCGGTGTTTGCGTTGGTCCGAACGGATGCAGGTGCACTCACTGTTGTGAATTTTAGTTTTGCAGCATCTAGTCTAGCTTATGGTCGGATAAACCCTAGTAGGCTGGTAGAACCAACCGAACCTAGTAGGCTGGTAGAATCAACCGAAGTGGTTATCGCTGTTCGAGTTCTAGTGCGTGAATCATTCATAGTTATCGTTAAAATGTTCTAATGCGTAGAGTCCATGGATTGGAGGTATCTGTTTTAGAGATCCTTTCGTAACTTGAGGAATCGTTTCGAGTTTCGACTAATACCTTAAGATAAAAATTATGACAGGTTAGTATGTCATATAACGGATTCATTTGCTACTGTCTACTGGTTATTGTTTGCGTGATACTCTTAAACTTAAGCTTCTTATGCTTCCATGACCAGAGCATTCTTAATTGATAACTGATAGTTTGCGTTACTATTTAGGAAAATATCTGGCTAAGTTTTTACTACTTTAGATTTGATTTTTCCATCAGTGGTAAGCGGTAAGTGTAGATACCTAGTCTTGTAGTGAAGCTGTTGCACTGCGAACAGTCCAAGCATCATCGATCATACTGAAGTCTCAATGATGTATTTGTTCAATTCCTTTGTACTGTCAATTTGCAGAAATTGGAGCTACCTGATATTAGGAATTCAAACAATTTATTGAATTGGTGGCATTTCTTTTTGGAAGATGAGGATTGGGTGATATTACCACAGAAAGCTCTAAGCACTGTATACTTGCAGAAATTGTAGAGTTGCTAATATTAGGAAAGTATCTGTACTATAGTTTCGTCATCCTCATTAAACTACTACTAGTATTTCTTTTATGAAAGTAAAAGGAACTGGCAGTATTCCATTGAAAGTTGAAACCTTTACATGGAATTCTGTATAAACTACAAAGCCCATCGTGCCGAATTTTGAGTCGATTTTCTTTTCATTGATTCATTGTATAAATTTCAAGTCAGTGTCTCACATCTCATAGCATATACAGCACAGTACCTAGCATGATGAAAATCTAAGCTATTTTTCCATTTCAGTATGCATATATCTGATTCACAGCTGTTCATCAGTTCATTTCAGGGGAAAGTATGAGATTCACAGGGTGTATGTGCGAAGCACAGCTCGGATTTATGAAATATACTATACAACTGACCCCAAGGATAGCTCTAAGGATTATCTATGCACTGTGCGTTGTGGACCTGCAGTTAAAGAGCCACTCCCCTCTGCTGAAGAAAGTATGCCCCAATGGAGTAGTGATGCCTCAACTAGTGAAAAGCATGAGCATGAAACCAAAAGCGTAAGCAGTAGTATTGATGAAGATAGCTGGGTTGATGTCAAAATCCCAGAGTTACATGTGGAAAAGAACAGATCTAAATCTCAAGAACCTAATGCAATTGGAGCCAAACAGGAAACCACTCTGGTAAAGCCTTATTTCTTGGTTTGTATCATGAAAGATTGTTAAATACTCAACCATAAACTTCTGCTGGGAGTGCTCCTATTGTGATATTAGCTTCTAACATTTTTCTGTAACTTTGTTTCGCTATGTGGAATGCAGGCACACTATGAAGCAACTGCTGAGATAACTGATGCAAGCCCATGTGTATCTCTAACTGTTCGCCTCCTTTCACTTCAGTCAAAAACATCAGTGCACATCGAGGAGATTTACATATTTGCTGATCCTGTTGAGCCAACCAATGATGAATCAGAAACACGTCCTGGAAACATGGGAGGTAGTTCTTTGTTGGCTATGCTTGTCCCTAGCCTCATGCAAATGTCCAAATCAAGGAACCAGAAAACGGACAATAAATATTTTTCTGATGCCTCAAGGACTCAGCTTTCCCAAGGTTGTGCAATGGCAGTGAATAATAGTCCATGTGAAAATGTAGTGCGAGATGCAGAGCCGTGTAGCACAGATGATTTAAATTTCAAGTCAGCAGGGATGGAAAGCAAACTAAATGCTATAGATGGCGATACAATAACTTATGAAAAAGGCAACCATTATGAGCTAAAGGATTCCAAGTCTATTCTATTGCCTATACAAACAACAGAAAATACACAAGCTCCTTTGACAAAGAACCAGAGTGTGTCAAATACAGATCAGCCTGTTACTCCTCTCATGGATGAAAATCCAAATCCTTACAGTCGCATTGAGGGAAAGCTGGATACTCTTCTCTCTAAGATGGAGAAGATGGAACTATACTGCTCCAGGTTTGACGATGGTATGATGAGGCCTATCTGTAGCATCGAGTCAAGGCTTCAGCGATTGGAACAACAGTTTGATGTGTTCTCTATGGAGATTAAGACTTTACAAGCTTCTTCTGCAAGAATGACAGCCCCAGATGGTTTATCTGATATGATTAATCCACAGGATAAAACAGATAATGATGGTAAGGCTGAAAATTCTGCTTCCACAACCAACAGGCAGCCAGGTCTGGTTGTCAGAGCACCAGAGTTTTCTTTAGAAGAATCCTTCAGTTGCGATAAGTCCAATGAAAATGCAGTTACCTTACGTGGACCGAGCATGGTGCCAAGGCTTCTTGTTAAGGCTCCTGATTTTGTTTCTGAATCTGAGTTTGCTTGTGAGAAGCTTCATGATGGGTCTTTCTCACCAGTTGATTTTGCTCTGTCTTCTGAGAAAGAACCTAAAACTTCCCCAGGTTTAGTTGTCAAGGTTCCAGAATTTCCAAATGATTCAGATGATGAATTGGAGGAAGAGAAAGAAACAGAAGTTGGTGATCATGATGATGGTCATACAAAATCTGATGCTGCTTTGAGTGAAAGCACTGTTGACAGCTTCAAAAGCAAATCTCATGTATCTGTCGATGGTGCTCTAGCATCAGCCTTGGAGGCACTTCTTGGTTCAACCAAGAAAACACCATCTTCGCAATCTGCTGCTTGCCCTGCCAGTAATTCAACTGCTGAAAATACTACTGATTCTTCTACCTGCCCATTTTCTTCTGAACAGTTGATGAGACATCCACTAATGATGGCTCGGCTGGCCAATTATCTGGTACATTCGTTGATGCAAATAAGGTCAATACCTTCATATCTTGTGAGGAAGCAGATGCAGTTCCACAAACTTATCTCTCTAAGGCAAACTTGAAGGCTGAGGTAAACGATCTGAATAATGTTCTCGATTTGAACATGATGGCATTTGCTGAAAGCACAGAACCCTTGTGTGTTCCACAGCTTCACACAGTTGAGGAATCTAAAGATGTTGGAAGCCAAGCAAATCTAAAGAATAATGGCTCTAGTTCATACATGATGCAATCCATTGCAAACACTGAGCACATCATCGCTCCTTCTCAGCTTCCTACTGTCTTGGAATCTATTAATGATGGACAACAGTTGAATGGCAACAGATCTACCTTGTCCTTGGCAGAGTTTCTTGTGGCAAGAAATGCTAACTTTAGTAAGAATGTGATTTCTGAAGCATTATCTAGTAATGGTGGTGCTGAAATGCATACCTTCAAGAGAACATCGATGGAATCTGCTAAGAATATAAAGGATATCAATCAACTTCTGCTGCAGAAAGCTCTAGAGGTTAATGAGGATGACAGTGCTAAGTTTTCTGTTTCTGGTGGGATGAACTCTTGTTGTCTTAGAGCCTTTACTGATTCCAAGAAAAGATGCATTGAGAGCAGCGGCTTGGAGGCAAGCCTCAATGATAACTTTACAAAATCAGAGGTAGAGCACTCCTTGTCAGATTTGTGTAGTATGGAGTCATTTAGTGCAGAACCTGCTAGAGAAGCTGTCGGCTCAGGTGGTGTCACAGCTGAAAATTGTGTTGATGATCCTTTTACAGGTAGTTCTACTGTAAACCCAACTGCAGGCGAAGAGCTGCAAAAGGTGTGTGACTTGCTTTACGAGTACAATGATGATGTTTTAGGCATGGCTTTCGTGGCAAAGAAAACAAGTAAGAGCAGCCCTTCTCTCGAAGTCCTACTTGCTGAATCATCTGATTCGGAAGCGGAAATTTCTGATGCGAAGGACACTGACAATGATGCTGGCTTAAGTTCAGCTAGGTTGTTTAGTACATTCTCGTCTTCAGATGATGAAGCTCCTCGCACTGATGAACCTATAATTGATGTAGTTGATCTGCCAACACCATTGGATGCATATGCTTCTTCCAAGAACGAGCTGGTTGATGATGAGTCTTTGCTTGATATGGATGATCCGCCAATTCCTCCAGAGTCGTATGCTTCTGTCCTAAGCGACATGCATCATGCATGTCTAAATGATCAATCAAAACCTTCAGGGACATTCGCTGAAGAGGGCAATGGAGAGTATCCTGACAGCCTTATATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025970