BGIOSGA025988

From RiceWiki
Revision as of 06:37, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA025988| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA025988, complete gene.| tag = OJ1699_...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA025988

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA025988, complete gene.

LocusTag

OJ1699_E05.18

Ensembl Transcript ID

BGIOSGA025988-TA

Ensembl Protein ID

BGIOSGA025988-PA

Length

3327

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21215898..21219224

Sequence Coding Region

21215898..21216107,21216879..21216965,21217072..21217323,21217432..21217596,21217930..21217983
,21218139..21218285,21218847..21219224

Genome Context

<gbrowseImage1> name=IndicaChromosome07:21215898..21219224 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:21215898..21219224 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGCGGCGGCGGCGGCTCGGAGGGGATGCCTGGTCGCGCTTCTGGCGGTGCTCTTCTTGGCCTGCGCCGCTGAGGGGGGTGCGGCGGCGGCGTCGGCGGCGCAGCAGCAGCAGCAGCTACGGCGGCGGAGGCATCTGCTGCGGCGGCAGCGGCAGGTGCACAGCCACCTCAGGCGGCTCAACAAGGCGCCCCTCGCCAGCATCGAGAGTCCTGATGGAGACATCATAGACTGTGTGCACATCTCCAACCAGCCTGCCTTTGATCACCCTTTCCTCAAGAACCACACTATCCAGATGAGGCCTGATTACCACCCAGAAGGCCTGTATGATGAGTCCAAGGTTGCATCACAGCAGAACACCCAGACAATCACCCAAATGTGGCACAAGAACGGCGTGTGCCCGGAGAACACCATACCAATCAGGAGGACCAAGAAGGAGGATGTCCTAAGGGCCAGCTCCATCAGGAGATATGGCAAGAAGAAGCACAAGAGCACCCCAAACCCCATGTCTGTCGACCCTGATATGCTCAATGAGAGTGGCCACCAGCATGCAATAGCATATGTGGAAGGTGATAAGTACTATGGAGCTAAGGCTACCATCAATGTGTGGCAGCCAAGAATTGAGCAGGCCAATGAGTTCAGCCTGTCCCAGCTCTGGATCTTGGGTGGTTCCTTTGGGCAGGACCTTAACAGCATTGAAGCAGGATGGCAGGTTAGCCCAGATCTGTATGGGGACAACAACACTAGACTCTTCACCTACTGGACTAGCGATGCGTATCAGGCAACAGGATGCTACAACCTGCTGTGCTCGGGGTTCATACAGATAAACAATCAGATAGCCATGGGCGCTAGCATCTCCCCACTCTCCAACTATGGTGGTTCCCAGTATGATATCAATATTTTGGTCTGGAAGGACCCAAAGGAGGGCAATTGGTGGTTGCAGTTCGGTAATGACTATGTGTTAGGCTACTGGCCATCCTTCCTCTTCTCCTACTTGGCAGACAGTGCCTCCATGATAGAGTGGGGTGGTGAGGTGGTGAACTCGGAGCCTGATGGTAGCCACACCTCCACACAGATGGGCAGTGGCCACTTCCCTGAGGAAGGATTTGGCAAGTCCAGCTACTTCAAGAACATACAAGTGGTGGATTCATCAAACAATCTTAGGGCACCAAGTGGTATTGGGTCATTCACTGAGCAATCCAACTGCTATGATGTGCAGAATGGCAACAATGGTGACTGGGGCACATACTTCTACTATGGAGGGCCAGGGAAAAACCCAAACTGTCCATAG</cdnaseq>

Protein Sequence

<aaseq>MAAAAAARRGCLVALLAVLFLACAAEGGAAAASAAQQQQQLRRRRHLLRRQRQVHSHLRRLNKAPLASIESPDGDIIDCVHISNQPAFDHPFLKNHTIQMRPDYHPEGLYDESKVASQQNTQTITQMWHKNGVCPENTIPIRRTKKEDVLRASSIRRYGKKKHKSTPNPMSVDPDMLNESGHQHAIAYVEGDKYYGAKATINVWQPRIEQANEFSLSQLWILGGSFGQDLNSIEAGWQVSPDLYGDNNTRLFTYWTSDAYQATGCYNLLCSGFIQINNQIAMGASISPLSNYGGSQYDINILVWKDPKEGNWWLQFGNDYVLGYWPSFLFSYLADSASMIEWGGEVVNSEPDGSHTSTQMGSGHFPEEGFGKSSYFKNIQVVDSSNNLRAPSGIGSFTEQSNCYDVQNGNNGDWGTYFYYGGPGKNPNCP</aaseq>

Gene Sequence

<dnaseqindica>1..210#982..1068#1175..1426#1535..1699#2033..2086#2242..2388#2950..3327#ATGGCGGCGGCGGCGGCGGCTCGGAGGGGATGCCTGGTCGCGCTTCTGGCGGTGCTCTTCTTGGCCTGCGCCGCTGAGGGGGGTGCGGCGGCGGCGTCGGCGGCGCAGCAGCAGCAGCAGCTACGGCGGCGGAGGCATCTGCTGCGGCGGCAGCGGCAGGTGCACAGCCACCTCAGGCGGCTCAACAAGGCGCCCCTCGCCAGCATCGAGGTAGCGGCCCGTCTCCTCCTCTCCTCTCCTCTCCCACCAACATGGCGCGCATTCAATGCACGCCGCCTCGCTCGCCATCGATTTCCCGTTTCGTTTTTTCTTTTCTTTTCTTGCTCTGGTCGCTCGCTGGTATGGAGGGGCGGAAGGAATGAATCCATGGAGGGGGAAAAAAAAGAAAAGGCGGTGGTGCATTTGGTATGGAAGTCGCAAAAAAAGTTTTGCGCTTTTGATTGATGGGTCGACTTGCTCGTGCTTGGTGATGAGCTCGCTTTGGAAGTGTGGATTGACTGTTCCTCCTCCTCTCATGGACCATGCATTGGGGTTTCTTCCGTTGATGGAGGAAAAGGCTCGCTTTTGGAGGAACATTTTATGGGTGCCCGTGCTTCTTTGGGTTCTCTCCACTTCAAGGGAGGAAAGATATGGTTGCTTTCCTTTCTTTGGAGGAGAACAGACTACAGAGTGTCTTCTTCCTTTTCTTTCTTTCTTTTTTTTCCTCTGAACCATTAACAAATTTTGCTTTTGTTGCTCAAAGATTTCTTCTTTGGAGTATGGTTGATAGTCTACTTCATGGATGTTTTGGATTATCTGAAGTTGCATTGGTTTGATATATGGAATTCTAGAACTTTCTTTTCCTATTTTTTTTACACTACTTTTGCTAAAATGAGATTTTTCCCTGTCTCTCTCACATCATTCATGTCCTGAATTTAGGATAATGTTTTCTCTTTTTTTTTTCTTGCTTTGATTGCATAACTGACAGTGTGAATTCAACAGAGTCCTGATGGAGACATCATAGACTGTGTGCACATCTCCAACCAGCCTGCCTTTGATCACCCTTTCCTCAAGAACCACACTATCCAGGTTCCTCTCTCTCCAGAACACACCACTGCCCCTTTTTTTACAGTTGGGGTAATGCTTCCCCACATATCATGATAACACTCAATGGTGCACTATCACCACCTTTCAGATGAGGCCTGATTACCACCCAGAAGGCCTGTATGATGAGTCCAAGGTTGCATCACAGCAGAACACCCAGACAATCACCCAAATGTGGCACAAGAACGGCGTGTGCCCGGAGAACACCATACCAATCAGGAGGACCAAGAAGGAGGATGTCCTAAGGGCCAGCTCCATCAGGAGATATGGCAAGAAGAAGCACAAGAGCACCCCAAACCCCATGTCTGTCGACCCTGATATGCTCAATGAGAGTGGCCACCAGGTAGGGTAGAGTGTGTAATGTGTTCCATTCAAGAACCAATCTCCCTAATAGTACTTAACATGTTATTGGGATTGTTCATTTAAATCTTGTTTCTGCTCCATGGTGCAGCATGCAATAGCATATGTGGAAGGTGATAAGTACTATGGAGCTAAGGCTACCATCAATGTGTGGCAGCCAAGAATTGAGCAGGCCAATGAGTTCAGCCTGTCCCAGCTCTGGATCTTGGGTGGTTCCTTTGGGCAGGACCTTAACAGCATTGAAGCAGGATGGCAGGTGAGAGGGAGAAGAAAAACCCACTTAGGTCAAAAGTTCTATTAAATGCTTTGTTGCAGCTTCCATTTTTGTTCTTCCATGCGCCCAATTATGAAGCTCATTCCTCCCCTTGCATGCGTCAATAATTCCTGTTTTGCAATAATGATATGGTACACTACGACTGGAGAGGCCTTTCATTTTAGGAGCCAGACTAGATTATATTCGTTTACGAAGATTCTTTCTTTCATGAGCAACTGTTTTAGGAGCTAAGAATGCTGTGATGGCCGATTAAAGCTATATGCAGTACTCTCTTGCATTGTGGCTTATGTCTTTATTCTCTCTACATTATTGCAGGTTAGCCCAGATCTGTATGGGGACAACAACACTAGACTCTTCACCTACTGGACTGTAAGATAAACATCACATTCCTTTCAATCTTCACGATAATTGTTTTTTAGCTTCTTTTTGTCTCTTGTTTAGATCTACATTCCTATCTTGCTGTTATTAAACTACAGATTAGCCTAATGATACTGATTTTTGTATTGCCTCTGTACTCTCTGTAGAGCGATGCGTATCAGGCAACAGGATGCTACAACCTGCTGTGCTCGGGGTTCATACAGATAAACAATCAGATAGCCATGGGCGCTAGCATCTCCCCACTCTCCAACTATGGTGGTTCCCAGTATGATATCAATATTTTGGTCTGGAAGGTAAAATACAAGAAACCTTCACATGCGTGTGTATACACACAGACGAAATTCATGAACGGTGCCAGCGAATCTATGCCCACCTGTTTCTTGTTCTTTCCTGAGGCACCTCCAGGGCTTAAGGTCAAGGCTACAACTGTGGCCCTGGCCTGTTTTGTGGACGCATTCACAGTTGTCCCCCACACACGTACTGTATTTATGCATGCTAATGCTAACACTAATGATTTGAGTTTTAAACAAATTTTCACAGGAATATTCTCCTAGAGCTCATGTTTCTTCTGTTAAAATTTTCCATGTCATTACCATGTGACATTATGTTGGCATGCCACCACTTGCATAACCAACAAGATCTCGCTCCACGTATAATTCTGAAAGTGGGCTATCAAGCTAAAATAATTTAAAACTCGTTTTCATCAAAGGGTAGATCCTTTTCATAGTGCATATAATGAACACAAAAAGGAAAACTTTATTTTTGCGCGTGCATGATAACACTAAAAGGTACCTACAATATTCCCTTATCATTATCCTATCTTCTAACTATGCCCCATGGATTGTGGTTTGCAGGACCCAAAGGAGGGCAATTGGTGGTTGCAGTTCGGTAATGACTATGTGTTAGGCTACTGGCCATCCTTCCTCTTCTCCTACTTGGCAGACAGTGCCTCCATGATAGAGTGGGGTGGTGAGGTGGTGAACTCGGAGCCTGATGGTAGCCACACCTCCACACAGATGGGCAGTGGCCACTTCCCTGAGGAAGGATTTGGCAAGTCCAGCTACTTCAAGAACATACAAGTGGTGGATTCATCAAACAATCTTAGGGCACCAAGTGGTATTGGGTCATTCACTGAGCAATCCAACTGCTATGATGTGCAGAATGGCAACAATGGTGACTGGGGCACATACTTCTACTATGGAGGGCCAGGGAAAAACCCAAACTGTCCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA025988