BGIOSGA026020

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Revision as of 06:38, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026020| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026020, complete gene.| tag = OJ1127_...")
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Gene Name

BGIOSGA026020

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026020, complete gene.

LocusTag

OJ1127_E01.105

Ensembl Transcript ID

BGIOSGA026020-TA

Ensembl Protein ID

BGIOSGA026020-PA

Length

2837

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:21678574..21681410

Sequence Coding Region

21678574..21678837,21679888..21679960,21680026..21680177,21680270..21680959,21681078..21681410

Genome Context

<gbrowseImage1> name=IndicaChromosome07:21678574..21681410 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:21678574..21681410 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCCGCCTCCGCCGCTCGCCGCGCTCCGCCCCGCGCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGTGCCGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCGATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGATGATCTATCAGGTTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGGCCGGGAAAAACCAGCGGTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAGATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAACTGGTCTTGTGGACATAGATAATGAAGTAGAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACACTCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACGGATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCTGAAGCCAACCATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGCAAAGTAGTGCAATTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCTCGATTTCTTTTTCTATCAAAAGAATTAGGGGCTCCAAAAGATAACATTGTTAAAATGGTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATATTGCCTCGAATCAATTTCCTTAGAAGCATTGGCATGAGAGATACTGATGTTCTCAAGGTATTGACGAGTCTGACTCAGGTGTTGTCTTTGTCCTTGGAGGAAAATCTCAAACCAAAGTATCTTTACTTGGTCAATGACCTTAAAAACGATGTTCAATCCTTGACAAAGTATCCTATGTACTTGAGCTTGTCCCTTGACCTGAGAATCCGTCCCCGTCACCGTTTTCTTGTTTCATTGAAGAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAAGAGGTGGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCAGAGCATGCTGCTTAAAGGTTTTTCAGAGAAGACTGGAAGGAAAACATTAACATCGAGGCGGTAG</cdnaseq>

Protein Sequence

<aaseq>MAPPPPLAALRPAPFPLPRLLPCPASAAARRGAVAFSLQTNVRLLKPNRRSRRSRYPYYDHDEDEDDDEAEFEFEEGEEEEEDGYETDDDLSGLEYPGVLYSNNPRAPIKKPGREKPAVKQNWEGRQPKTRDRCDTSKKVDALHAKSKASRSTGLVDIDNEVELKNESISRSLFQKLQEEYDFDDKWLPLIDYLCTFGLKESHFTNMYERHMACFQISQASAEERLEFLLSVGVKSKDMKRMLVRQPQILEYTLSNLKSHVAFLVGIGVPSARIGQIISAAPSFFSYSVEQSLKPTIRYLIEEVGIEESDVGKVVQLSPQILVQRIDSAWKSRFLFLSKELGAPKDNIVKMVTKHPQLLHYSIEDGILPRINFLRSIGMRDTDVLKVLTSLTQVLSLSLEENLKPKYLYLVNDLKNDVQSLTKYPMYLSLSLDLRIRPRHRFLVSLKKAPKGPFPLSSFVPTDERFCKRWAGTSLEKYHTFRQSMLLKGFSEKTGRKTLTSRR</aaseq>

Gene Sequence

<dnaseqindica>1..264#1315..1387#1453..1604#1697..2386#2505..2837#ATGGCGCCGCCTCCGCCGCTCGCCGCGCTCCGCCCCGCGCCATTCCCTCTCCCTCGCCTCCTCCCCTGCCCCGCCTCCGCCGCCGCCCGCCGCGGTGCCGTCGCCTTCTCGCTGCAGACCAACGTGCGGCTCCTCAAGCCCAACCGCCGCTCCCGGCGATCCCGGTACCCCTACTACGACCACGACGAGGACGAGGACGACGATGAGGCGGAGTTCGAGTTTGAGGAAGGGGAGGAGGAGGAGGAAGACGGCTACGAGACCGATGTAAGTTCCCTCGTTTGGCAGTAGCCGCTTCTAGCTTTGCTACTGTCGTGAGAGGTTGCCTGAGTGGCTGGGTCCTTAGCTAAAATTGCTTGCGTACTCAAGCTCGTGCCATGGGATAAGTGCAAGGCTGTGCTTATCACATGATATCATCATCCAATTGCTGCTCATTATGTAATTAGAGCTCCGGAAGGAATATCATTCAACTGCTGCTCATTATGTAACTAGAGCTCCGGTATTCCTTTTGTTTTGGAGTACATTAGAGATGTAATACCATTTTATTGCGTCAGGCTAGAGAGTTTCAGAAATTGAACTAACCAACATCTCATTAGGTTGTAGGATGTAATGTTGTATGCACATTGAGTTAAAGAGGCATAAGTTTGTCAAAGGAATCAACAAACATTGTAGGATGTAATGTTGTATGCACATTGAGTTAAAAGAGGCATAAGTTTGTGAAGAGCGCACTAGTGGTAAATCATCGTTCCTGTATTTAATGGTATAACACCTTAACCGCTCATATGATAAACTGTTTTAAAAGTTTTCTGCCTGGCTGCCACAGTTAAACAATTCTTATTTATATGGTTTATTTGTTCCATGCATATTTATGTGCTTAAATACTCAATGGTATGCTCTTAAACTTAGGCTAGCTGGGTAACAGTAGGTAGAGGTGGGCATTTGGGTGAGAGACTAATTTGATTTCTGCCTTGGGTAAACCATATCCAACATACGGGGACCAATAGAAACAGCGAAACTCGCCTTTCTGCTGATTAGTGAAGACTTAAAAGAGAGAGGGAGAGAGAATCAGTTATGTTTCTTCTGCCACCCTGACTATATGATCTGTTCTGCATTGAGTTTTCAATATATAGTATACTGCATCACTGGGTGTTTAGTCCACATGCCAAACCAGGCAGAATTGCAGATTATTGGATTCAAAAGGATAAAGTTTTGTGATGCTAACTTTCATTCATTTCTCATAGAATGAAATATGAGAAACTTACCATTGGCAATATTCTACATTTCCAGCATTCTAATATACTCTCTTACTCTTTTCAGGATGATCTATCAGGTTTGGAGTATCCTGGTGTACTTTATTCAAACAATCCTCGTGCTCCAATCAAGAAACCAGGTATGAAAGGCTGTGAAAATCCCTGATATCCAGTGGTTACTTTGTATTAATACTTTATTCTCCAGGCCGGGAAAAACCAGCGGTGAAACAAAACTGGGAAGGAAGACAACCTAAAACACGAGACAGATGTGACACTTCAAAAAAAGTCGATGCTCTGCATGCCAAGAGTAAAGCTAGCAGATCAACTGGTCTTGTGGACATAGATAATGAAGTAGAGGTAGACTACTAAGGTTGATTCAGTGTGTCCATGTTCTTGTTTATGTTCAATATTTAACGTATGCAGGATAAATGATTGATTTATTTTCGCAGTTGAAAAATGAAAGTATCTCTAGAAGCTTGTTTCAGAAACTTCAAGAAGAATATGACTTTGATGATAAATGGTTACCACTAATCGATTACTTGTGCACATTTGGACTGAAGGAATCTCATTTTACAAACATGTATGAGAGACACATGGCCTGCTTTCAAATCAGTCAAGCTTCTGCAGAAGAAAGGTTGGAGTTCCTGCTAAGTGTTGGTGTTAAAAGCAAGGATATGAAGAGGATGCTTGTTAGACAACCACAAATTTTGGAATACACTCTCAGCAACCTGAAGTCTCATGTTGCATTTCTGGTGGGCATAGGTGTTCCTAGTGCACGGATAGGTCAAATTATTTCTGCTGCTCCATCATTTTTCTCTTACAGTGTTGAGCAGTCTCTGAAGCCAACCATAAGGTATCTGATTGAGGAAGTGGGCATTGAGGAGAGTGATGTGGGCAAAGTAGTGCAATTAAGCCCACAGATTCTGGTCCAGCGAATCGATAGTGCATGGAAATCTCGATTTCTTTTTCTATCAAAAGAATTAGGGGCTCCAAAAGATAACATTGTTAAAATGGTCACAAAACACCCACAGCTGCTTCATTACAGTATTGAGGATGGAATATTGCCTCGAATCAATTTCCTTAGAAGCATTGGCATGAGAGATACTGATGTTCTCAAGGTATTGACGAGTCTGACTCAGGTATTACCACATTCAAGTTCCCTATCCTTTTCATTTTTGTTTTGTTTTTACAAGTATCTTCATTGTTCAATGTAGACAGATGCCATTATAATACCCTCTAATATTTGTTTCTTTTCAGGTGTTGTCTTTGTCCTTGGAGGAAAATCTCAAACCAAAGTATCTTTACTTGGTCAATGACCTTAAAAACGATGTTCAATCCTTGACAAAGTATCCTATGTACTTGAGCTTGTCCCTTGACCTGAGAATCCGTCCCCGTCACCGTTTTCTTGTTTCATTGAAGAAAGCTCCTAAGGGTCCATTCCCTCTTAGCTCCTTTGTGCCTACAGATGAGCGATTTTGCAAGAGGTGGGCTGGGACTAGCTTAGAAAAGTATCATACATTTCGTCAGAGCATGCTGCTTAAAGGTTTTTCAGAGAAGACTGGAAGGAAAACATTAACATCGAGGCGGTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026020