Os12g0154600

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0154600| Description = Protein of unknown function DUF250 domain containing protein| Version = NM_001072719.1 GI:115487399 GeneID:4351535| ...")
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Gene Name

Os12g0154600

Description

Protein of unknown function DUF250 domain containing protein

Version

NM_001072719.1 GI:115487399 GeneID:4351535

Length

3356 bp

Definition

Oryza sativa Japonica Group Os12g0154600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2683873..2687228

Sequence Coding Region

2684195..2684327,2684978..2685162,2685253..2685453,2685834..2685995,2686421..2686741

Expression

GEO Profiles:Os12g0154600

Genome Context

<gbrowseImage1> name=NC_008405:2683873..2687228 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2683873..2687228 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcttcttccctgagcaaatccgacaagaagaaggtgctggattttgcggcatggagtttcaacatcaccacgtctgttggaatcatcatggtcaacaaggctctgatggctacgcatggattcagtttcgccacaaccttaactggccttcattttgtgacaaccaccttgatgactatcgtgtttcggtggttaggcctcagccagccctcccacttaccactgccagatctgattaaatttgtgatcttttcgaacttgtcgattgttggaatgaatgtgagcttgatgtggaactctgtggggttttatcagatagcaaagctctgcatgatacctgcatcatgtctcctggaggttgtcttcgatcatgtacattattctcgggacacaaagctgagcataatggttgtgcttataggtgttgcggtctgcacagttactgatgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctttgcaacaatattatgttcattttctccaacgaaagtactctctgaactcattcaacctcctgggtcacactgctccagcccaagcaggatcccttctgctagtggggccctttgtagatttcttgttgacaggcaaaagggtggatcactttggtttcacatcgattgctttgtttttcctgactctctcatgtgtcattgccattggtgttaatctgagccaattcatctgcattggtcggttttctgccgtatccttccaagtcctgggccacatgaagacagtgctcgtgttgtcccttgggtttctcttctttggcaaggaaggtctgaattttcaggtagtccttgggatgatcctcgctgttgttgggatgatatggtatgggaacgcatcagcgaaaccaggtggcaaagagcggcggagcgttcttccagtaaggtctgagaagcctagtggagcattagacgagaaggatggcagtgagaaatag</cdnaseq>

Protein Sequence

<aaseq>MASSLSKSDKKKVLDFAAWSFNITTSVGIIMVNKALMATHGFSF ATTLTGLHFVTTTLMTIVFRWLGLSQPSHLPLPDLIKFVIFSNLSIVGMNVSLMWNSV GFYQIAKLCMIPASCLLEVVFDHVHYSRDTKLSIMVVLIGVAVCTVTDVSVNAKGLAA AVIAVWSTALQQYYVHFLQRKYSLNSFNLLGHTAPAQAGSLLLVGPFVDFLLTGKRVD HFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAVSFQVLGHMKTVLVLSLGFLFFG KEGLNFQVVLGMILAVVGMIWYGNASAKPGGKERRSVLPVRSEKPSGALDEKDGSEK</aaseq>

Gene Sequence

<dnaseqindica>323..455#1106..1290#1381..1581#1962..2123#2549..2869#aaaaggcccctcggcctcgccatcgccagccgccgccgacgagctccatccggcgagcagcggtggctgccgccggtaagcacccgcccctacccacgtccccccccttcccccctgcctcttcttctctcatctccctcgttctacccgcacctcatcttctttctcttctagatctagaagctgctttttctctctgtcataaccttggtagtaatgcttgctgttctttgtttttctcccaaaaaattttgttaggtccgcccgcccgtgccaagtgttgggtgttgatttgttcaagtctggaggaaattcgagcgaaatggcttcttccctgagcaaatccgacaagaagaaggtgctggattttgcggcatggagtttcaacatcaccacgtctgttggaatcatcatggtcaacaaggctctgatggctacgcatggattcagtttcggtgtgtgtgttacttgctaccttcagatatcttggttctttattttgtgatgatgatgttttattctaggcttactccgtgttctgaatgacaaactagcagtatcctgtttgatttaatattgaacgaataaatattactagatcttgtgtagtaattgtagactccagatgtttgttcctttggacatgcaattgatcaactgactaacaggcatctgtaaaccttcagtcatttattttcgcaatgctagcacaaattccaatcatttgagttctagacgatcgataaatctttaactgaacttgtatgcctaatctaatgatgccaaaaaggttcaccagataggcttgctttttttgtgatctaacacgagttaaatatgagctatgaggtatcctctggactctcaaagccactctgttctagctgctatgagcctatgatcagaacttttttttttgtcacaagttgccacactgccttctgaacatgaaaaggaccttaatggaacaccgggagcattgtaacttatctgatttcttatatccaaccagatttatgggctgcccctcaacatgtttcatttgtatgataatggaattatctcctgccatgccatgtaactgattatgttctgtgttttgcagccacaaccttaactggccttcattttgtgacaaccaccttgatgactatcgtgtttcggtggttaggcctcagccagccctcccacttaccactgccagatctgattaaatttgtgatcttttcgaacttgtcgattgttggaatgaatgtgagcttgatgtggaactctgtggggttttatcaggttagcaaaggatggttctgctagctaaattccatcatggctttgaactttcaagtttcaaaagctaaagaatccttttgttctcttcagatagcaaagctctgcatgatacctgcatcatgtctcctggaggttgtcttcgatcatgtacattattctcgggacacaaagctgagcataatggttgtgcttataggtgttgcggtctgcacagttactgatgtcagtgtaaatgcaaaaggtctggctgctgctgttatagctgtttggagcacagctttgcaacaatatgtaagttaaaccaacctatgttgtacttgtatggttatgtcccatttatctgctatgagataatactgccttctattcctatagctgtcctttggcaaccataaacatttttacgggggagaaattattgcatggtggcacaacaatgactctgcttatctatgggtctgcttattgacgaatgatgaataattggcagatggcactccctgaatcattgttggttccctgtagtccttgttagttatgaataattggcactccttaatcattgtttgattttgtcatttcttaagttatagccaaatagcaccttaatttcttttccttacctggacgcatagacaatacaattttaactcttctattttcctttgcagtatgttcattttctccaacgaaagtactctctgaactcattcaacctcctgggtcacactgctccagcccaagcaggatcccttctgctagtggggccctttgtagatttcttgttgacaggcaaaagggtggatcactttggtttcacatcgattgctttggtaagaggcaagcctctttacaatgctctgtatctgatctcactgatatacatgttctagtttttccataggtaattcgccttgcagtttggttagttgtgtaatggtgatttgctgctggttggcattttgctggttcacattctgtaatgttgcaagtttatcaaatggcctagactagcattatgttatatcttgtgaccaaagaagtctttactttacagcattgctcgttatctgtaacttcaaacaactatagtctatagctttccttttgtgtgcaatgtcttgctttttagtaatctataggtaaactgtacttgattagaatattgatgaatttgagtgcatgtttgatttgtttgtatgtatttgacctcatattttccattttatcttacgatggcatttttatcattctgcagtttttcctgactctctcatgtgtcattgccattggtgttaatctgagccaattcatctgcattggtcggttttctgccgtatccttccaagtcctgggccacatgaagacagtgctcgtgttgtcccttgggtttctcttctttggcaaggaaggtctgaattttcaggtagtccttgggatgatcctcgctgttgttgggatgatatggtatgggaacgcatcagcgaaaccaggtggcaaagagcggcggagcgttcttccagtaaggtctgagaagcctagtggagcattagacgagaaggatggcagtgagaaatagtatgtgatctgcgatttatatgacaatttcttctgtgaagtttttctggtgatgcaagtatgatatacaaaggaaaccttgccaggcgttttcgtttaccgctgaagccatagattcgccatctagaaactcatcattgtcatagctataggatacagttaatatacatttgtcatcgcatttttttcgttctcctgtacattccttatgggggagatggcatagatgttctacagggttgcaagacagttgtccgaaaagacaatgtagtaattgtttgtgataacacggagttctacatttccatctggatctgtacagagcactatgctactatctgaagcagttcagttgcattgcagatttgcagtattttagactgaaacacacatgctgttctgtactagtggtgttgagctttgttgttgtagtgcctgcaagtgtcaagtgttcagattaactgattaatttgttggttctctgtggc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0154600, RefSeq:Os12g0154600