BGIOSGA026090

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Revision as of 06:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026090| Description = Probable 6-phosphogluconolactonase 2| Definition = Oryza sativa Indica Group BGIOSGA026090, complete gene.| tag = OsI...")
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Gene Name

BGIOSGA026090

Description

Probable 6-phosphogluconolactonase 2

Definition

Oryza sativa Indica Group BGIOSGA026090, complete gene.

LocusTag

OsI_025867

Ensembl Transcript ID

BGIOSGA026090-TA

Ensembl Protein ID

BGIOSGA026090-PA

Length

2532

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:22856255..22858786

Sequence Coding Region

22856255..22856439,22856546..22856681,22858265..22858786

Genome Context

<gbrowseImage1> name=IndicaChromosome07:22856255..22858786 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:22856255..22858786 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCAACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCTGAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACTACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCAGAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAA</cdnaseq>

Protein Sequence

<aaseq>MEREISALYEPKRNNEIRIFESSDEMSTDLAEYISQVSEISVKERGYFAIALSGGPLVSFLGKLCEAPYNKTLDWSKWYIFWSDERAVAKNHAESNYRITKEGFLSKVPILNGHVYSINDNATVEDAATDYEFVIRQLVKVRTIGVSESNDCPKFDLILLSMGSDGHVASLFPNHPSLELKDDWITYITDSPQPPPERITFTLPVINSASNIAIVTTGDDKSEAVHLAISDNADGPEAPSSLPARMVQPTDGKLVWFLDKSAASSLDAENDDAFEQHREY</aaseq>

Gene Sequence

<dnaseqindica>1..185#292..427#2011..2532#ATGGAGAGGGAAATTTCTGCCTTATATGAACCAAAAAGAAACAATGAAATAAGAATTTTTGAGAGTTCAGATGAGATGTCAACAGATCTGGCTGAGTATATCTCGCAAGTTTCAGAAATATCTGTCAAAGAAAGGGGATACTTTGCTATTGCCCTTTCTGGAGGTCCCCTAGTCAGTTTTTTGGGGTAATGTTATTTTCCTAAGTTAACCATATAGTGTTCTTTCATTTGCAAGAAATTCAACATATTGCACATTTTTATCTGAACAGCTATTCTTTTGCATTTTTAAAAGGAAACTTTGTGAAGCGCCATACAACAAGACCTTGGATTGGTCTAAATGGTACATCTTCTGGTCTGATGAGCGTGCTGTAGCAAAGAATCATGCAGAGAGTAATTATAGGATAACAAAAGAAGGATTCCTGTCCAAGGTATGTGAACTAGGAATTTTTCTGCAAGATTTTTTGGAGCCTCTTAAGATATACACCCATACTAATTTTACATTTCTTGCAAGTTTCGTCTTGTTCAAAATTAATTGATTTTGCTTCTGTGTTTATATATTAGTTTGTACTGAGTACTTACCAGATGGTAGTTATACCTTGCATGATATCCATAATATTGTTGTACATATGCTACTTTGTGCTTCTTATCAATATTTTTCTGGGTGAAGTGAGTAGATTTTGCAAGTTATACATATTCAGATATGTCAGGAATTTTTTTTTTAAAGAAAAAACCTTGGATGCTGTACTGGTTTATAGGATGGACTCATGTCCTGTTTCTGTTCTTTGGTGCTTCTTGTTTCCTTAGAATGTTCCAAGTATTTGGTGATTGATTTGCTTCAAGCCTGGGAATCCTCAAAAATTTCATTTCAGTAGTCAAAAGGACCAACCAGCAGGTTACAATTATAATTATAACCAAGAAATCGTTCCTCTTTTTAAAGTGATTTTTAAGAGGAAGGCCAGGTTGAGAACTGTAGAATATAATTTGGCTTTGCTCAAAGTTATATTGCTTAAGTCCAAACTCAGATCTTTATTCTGGTGCAACGTATCCATTTTACTTTCCTTGACACCTGATATTAATACAAGATAGCAAATAGTTTGATCTAGTTCTTCAATCCTGGGTAATGGTGCCTGTTAAAAGAAAAGTGGGGTCAGTTGGAATGTACCTTTGAGGTGCCTTTTACACCTTAGGCCCTGGCCCTGGCCCTGACTGTTGATCTGGATAAGCGCTGCATCAAGGAGGCTTATTTGTCTTTTAGCAGAACCCTTTTCTGCTATGGCTCAGCATGCTGACCATTATGTTCTGATCGTGCATTATCCTTTGCCAACTGCGGGAACAGATTAAGGCTGCCTAACTACTGCTTTTATTGTTCCAACTACTCTTGAAGCTCCCACCATTCACACCTTTTCATTTCTTCTCAGGATCACGTCTGGCTAATTTTGTCAGAGTAAAAGTTTATCCAAATGGGTGTCCTTTAGTCACATGATTTACATAGCATCTTCCATTGCTCTATATTAACGGGACACTTAATCCAAGCAGTTCAGGAAATTTCTGGGTATCCAGCTAGTTTTCAGAAGGATGGTGACATTTAGTGGCATCTAAAAGCTCTATTTAAGTTGGCACATTCCCTATTCTTGCTAGTGTTAATGTTGCATGAGATTATTGCAAGCATTTGTTTTTGTGCACAGGCTTGGGCCTTTGGTTATAGAATAGGTTTTATTGTATGCCTGTGCCATTGCCATTTCATACTACACAAATTCCCATGTCTGGTTTATCCTGCACTATATAAGCAAATAAAATGTGGCAATTGTTTGTCGGTTTCAGTTATAAGGTGATCCATGATGATGTAGAAAGAATCGTGTGTTGCCACTGTAAATTGAATAAGAATCCGCGGGGGCCTCCCCTGCTGTATCTTGATAAAAAAAACATAACTGTAAATTATGGTTTAGATAACTTATTCACTTACTATTTATGCTAAGATAATGATCTGTTGCATTTACATGGTTTCTTCTAGGTACCTATTCTCAATGGCCATGTCTACTCTATAAACGACAACGCAACGGTGGAGGATGCCGCAACAGATTACGAATTTGTCATCAGGCAGCTGGTCAAGGTCCGCACTATTGGAGTCTCCGAAAGCAACGATTGCCCCAAGTTCGATCTAATCCTGCTCAGCATGGGTTCTGATGGACATGTGGCTTCATTGTTCCCCAACCATCCATCCCTTGAGCTGAAAGATGACTGGATCACCTACATCACCGACTCTCCCCAGCCTCCACCTGAGCGGATCACCTTCACTCTCCCTGTGATAAACTCGGCTTCGAACATCGCAATAGTGACTACCGGTGACGATAAATCGGAGGCTGTCCATTTGGCCATTTCTGACAATGCAGATGGTCCAGAAGCCCCCTCATCGCTGCCAGCAAGAATGGTTCAGCCAACAGACGGCAAGCTGGTGTGGTTTTTGGACAAGTCAGCTGCGTCCTCTCTGGATGCCGAGAACGATGACGCCTTTGAGCAGCATCGCGAGTACTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026090