Os09g0368200

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0368200| Description = Similar to Polyamine oxidase precursor (EC 1.5.3.11)| Version = NM_001069545.2 GI:297609356 GeneID:4346881| Length =...")
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Gene Name

Os09g0368200

Description

Similar to Polyamine oxidase precursor (EC 1.5.3.11)

Version

NM_001069545.2 GI:297609356 GeneID:4346881

Length

12225 bp

Definition

Oryza sativa Japonica Group Os09g0368200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12751028..12763252

Sequence Coding Region

12751028..12751107,12751250..12751331,12751441..12751698,12751776..12751925,12752043..12752186
,12752284..12752539,12753101..12753247,12755908..12756157,12759783..12759858
,12760835..12760883,12761052..12761168,12763239..12763252

Expression

GEO Profiles:Os09g0368200

Genome Context

<gbrowseImage1> name=NC_008402:12751028..12763252 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12751028..12763252 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaagaaaacaaggtctccatgttgttgttggatggatggtggcatatggtgttgatgaatgtgatgttaatcaatgtgttcttggatatgggtcgctacaatttctttggttccatggaacctcatagatttgtatggttgaagaacgagtggatagaaaagagaaacgtgctcaaggtgcaccgttaccgtttgtttatgacactgaagttaaaccttagatcggaaattcggaaaggaaaacatttgacctgtatctcagcggggaagcggatatgggaggctgggatagcagacgtattgatcttagaggcgacagaccgcattggcgggcggatgcacaagcagagtttcgccggcgtcaatgtggagatcggtgccaactgggtggagggcgtcaatggcgaaaagaagaaccccatttggcccatcgtcaactccaccctcaagctcagaagcttccgctccgactttgacagccttgcccagaacgtctacaaggacggaggcctctgtgacgaagcatacgtgcagaagagaatggatcgggcagatgaagtggacaagagtggggagaatctctccgccacactgcacccaagcggccgggacgacatgtcaatcctttcaatgcaacggctcaacgatcacctacccaacggcccgtcgtcgccggtggacatggcggtggactacttcacctacgactacgagttcgccgagccgccgcgcgtgaccagcctgcagaacaccgttcccctccccaccttcaccgacttcggagacgacacctacttcgtcgccgaccaacgtggctacgagtccgtcgtccaccacctcgccggccagtacctcaacgccgacaagtccggcaacatcgccgacgcccgcctgaagctcaacaaggtggtgcgtgagatctcctactcctcgaccggcgtcaccgtgaagacggaggacaactcgacgtaccaggcagactatgtcatggtttctgcgagcttgggagtcctgcagagcgatctcatacagttcaagccacagctgccttcttggaagattcttgcgatctaccaattcgacatggccgtgtacaccaagatattcgtcaagttccccaagaaattctggcccgaaggggcagggagggagttcttcctctacgcgagcaccaggagaggctactacggagtctggcaggagtttgagaagcaatacccggatgccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccggacagccagaccaaggcagagatcatggaggttgtgaggtgcatgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtccgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagtatgaccagctcagggcgccggttgggagagtgtacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatcttgcaggtattgactctgcagagattctgatcaactgtgcacagaagaagatgtgcaaatataatgtcgggggcaagcacggctag</cdnaseq>

Protein Sequence

<aaseq>MEENKVSMLLLDGWWHMVLMNVMLINVFLDMGRYNFFGSMEPHR FVWLKNEWIEKRNVLKVHRYRLFMTLKLNLRSEIRKGKHLTCISAGKRIWEAGIADVL ILEATDRIGGRMHKQSFAGVNVEIGANWVEGVNGEKKNPIWPIVNSTLKLRSFRSDFD SLAQNVYKDGGLCDEAYVQKRMDRADEVDKSGENLSATLHPSGRDDMSILSMQRLNDH LPNGPSSPVDMAVDYFTYDYEFAEPPRVTSLQNTVPLPTFTDFGDDTYFVADQRGYES VVHHLAGQYLNADKSGNIADARLKLNKVVREISYSSTGVTVKTEDNSTYQADYVMVSA SLGVLQSDLIQFKPQLPSWKILAIYQFDMAVYTKIFVKFPKKFWPEGAGREFFLYAST RRGYYGVWQEFEKQYPDANVLLVTVTDEESRRIEQQPDSQTKAEIMEVVRCMFPDEDV PDATDILVPRWWSDRFFRGSFSNWPIGVSRYEYDQLRAPVGRVYFTGEHTSERYNGYV HGAYLAGIDSAEILINCAQKKMCKYNVGGKHG</aaseq>

Gene Sequence

<dnaseqindica>12146..12225#11922..12003#11555..11812#11328..11477#11067..11210#10714..10969#10006..10152#7096..7345#3395..3470#2370..2418#2085..2201#1..14#atggaagaaaacaagtaagagcaacgtagattgcaactcaatttgtagatgaatgactaagcactcgaatagggttccacaaaccgaaccagtgacgcaactgtaatggcaaaaataatgtaagcaaaactcgagtctaaactatggcggctactgaataaatatgattagggacatcctagggttacccggcaccacccccttggtcttagcgcacgatacaatacaaggcccaaagctcaaatcagaatcagactatgtgaggtatgtgacttgttttgcagattcctaactgctaaggaggaattttgatgtgagaccaaaaccatatgaaagttgcctccataaactttccaacaagtactcatgtgacctaagattccttctagactagagtctagcttcatttgaagcttatgctataaggagacctgaatccgaatccgaaacgtgtacaatttcatcttttgccttttacagaccaaaagtggtgtggtaatgttggagtagactttgggaaggtcttgggttggtccccaataaacttccttgataatccatatatattctttgcgctcggtctctttccttttactcaagcaagtacctcttcaaacgagaacagacactagtactgaaagggtttttacagacggcccgaaaggggttttcgcgtatggtagggctagctgcacacaccaaatgatatgcgaaaatcgctatttttgtgtgcgggtgggcgcacccgcacgcgaaaatcagaggttcgcgtgcaggtgcttattttgtcctcacgcaaaaataaaaaaaaagaaccaaaaatcacgaaaccctaaccctagaagccgccgccaccatccttgttgtcaccatcgttgcttgaagccactgccgctgtcctcgtcatctccgccgtccttgtcctcatcctccacctcctcgtcgggcataggggtggtgggatccgcgtgggagaggaaatggacatcgggtccatccctcacgtcaccgttgccacgcagtagaggccggatcctccgccgccacgcctcccacccaccaccgtcggatctgcctccgctagcaccgccgccgccggatccgcccctctcgagaacagccagctgcggatccatgaggaaggcaacgaggcctctccgctatcaccattgctgacctcgtccaccgccgccaagcctcccacccaccaccactggatccgcctcccctagcaccaccgctgtaggattcgcccctcttgaggccagccaaccgcagatccacgagggaggcagagagacccctctaccgttgttgtcgctgacctcctccgccatcaccgtcacgcatccggcagccaccaccgccgagagagagagagaggactgagagagagagagtcacagtggaggaactagaactcgatccttaggcgtcgaaagtgttggagctcgagcttaggaagggatgtcctcttgttcttccccaccagcaagcaaaaagtgcatggtgaactcttctccactttctcatttttgctatcggcaaggaaccaacgcataacatagtcagtagtacaaaacgtcacattcgtgacgctctcatagatatcgattcactttaaaccaacacctacgagggatttttcatgcaaacaaggctttttaaaaaccgacattcatatatgatacatcagtgccacctatggattgagccgaaccgacagcaccgaagaaaataactctagctagccaggttggtttttaagtgcctgcttaaatgccccccacccccctgtgcacgcacgcgtgcaaattcgcttcccttcttgatccatccgccctcatcctattctcttctccatccacaaggcaaccatatttgtgtggggactttggggggaggggggattgatggcggtcaacacatcggcgggaagattcttgactccatattatcccatggggagcaacagcggtgatggtgtagtattcttccttccagatatgtgttcttgtctactgacttgtgcatgcttgattcaatttttttcttcgatgttcatggaaacctttcaatcttagggtctccatgttgttgttggatggatggtggcatatggtgttgatgaatgtgatgttaatcaatgtgttcttggatatgggtcgctacaatttctttggttccatggaacctcataggtatgggttcctaaattggcacctatatgatttctcctcattggttttgccgaaactagcacatatgtgggttcccaaccgacacctatagggtgttgcaccaatgagtgtggataggaacaacttaagctcgttttgccttgctcatggccacaaccgcaaactcagatttgtatggttgaagaacgagtggatagaaaagagaaacgtgctcaaggtgaaacattgcactactacagtgcaattgcatggacaaccgcacgcaaaaactgattttcacgggtggttagttatggcgctgcctaaaaaaaggtaaaacaataaaaattctaaaatcatgaatccttagttccgaaccatagctccggcggcggctgatctgccgctcccccgatgccgtcgtccctgtagctcccgaggcgagcccgaagcccagagcccactatacatgaagctgccatcgccagtagccaaccaccttcgcccctcgaagggccggcgtcaaaatctgcgcactacggaggcactgcctccgaatcggcccctcccagcagtatggatgcacctgccgcggggccgctggcgccagctcaagtttgctctgctgctctcgtcgccacccctcctttagttgcaggcactcccgtcgcaactgtcgtcactgctcccatcgtcggttggtggaggacacggtgaggaagagaggagaggatgagggaggagatgtctcgagaggagaggggaagtaaaggaggacatagaattttttaagggaggagagaaaataagagggagaagactaggtggccgtcctgttgctaagcgtgcctcttaacaagtttgcatatatgtatttatttgttagctcaaaatcttttaacatacgggtgtttttagcctgtttggagaaaaaattaaagggattgtctacaaaaccatttttagtgtactgtttagcaaacaaatctcgctcaaattgaggagggtagtttaacataccctattccaaattatacaatggtgtaaaaagagatgttccactatgcaatttactcttttttataagtcaaatgatttaattatcgaacacatgtctacaagataacaatgtcatagtttaagctagagaggaaatattaattagttgtttccatatatgacgtgacatgtatatgcatatatatgacttccaggtgcaccgttaccgtttgtttatgacactgaagttaaaccttagatcggaaattcggaaaggaaaacatttgacctgtacgcataaaattctcaagggtccggtgtagttatatttatagcgccgtattttttacttaaaaaataggcaacacgtatttatattgtaagtctctaaattacatatgtaaatttagtgtatttataatataagtttcaaaattacatatgtaagtctcaaaattatatagtttttacatgtgtaaatggtgtgtaagtgggatgtaagtggggtgtaaatttgtattaaggaatagcatgcatgcatgcatataacacgaaattaattaggagccgtttcactcggatttgcatgactttagaggttagctagcatgctttcaggtctcttggcaaggaaaaagtatggaagcacggatcttaaacacagatccaacggccagagaactaattgtaatcaactaaaaaatttgtcgacacaattatagcaaatacgaattctcaatggctacgcgttgaaatggaaggcgacgatcaatttgtttcgctggtcggtcaatttgttcgtcttacaaccttaaaacatgcgtgtacgactcgatctatatatgtgtcacgtttattttcctccaaattaacaatacaatgtacacacaacaacctctttcggaaactatatatatatgtaggtacaagttcattctcgtgccaagaagggagatcgagagtacttgaaagacagtatgacgaagcccacgacgatggccatttttcttgtcttagcgctatccatagcacagcttcttccgtccctcgtcgctggcaccggccggccaagggtcatcattgttggcgctggcatatccggtacgtacaatctatctattatattattatagcactagaaaaaagagccttcacgttcgctctgatggcctaaaaatttttacattaatcggagaaaaagaaaaggcagagtccatatagaaatacatttagaaatagctgaaattcggaattaaaaaataaggaatattagaagaggagactagagtccatatagaaatacaatttagaaatagttgaaattcggaattaaaaaataaggaatattagaagaggagactagactccatatagaaatacaattaggaaataactgaaagtcggaattaaaaataaggaatattagaaatagagtatagagtacttatagaaatacaattagaaaatagctaaaattcgaaattaaaaataaggattattagaagaggagactagagtccatatagaaatacaattaggaaatagctgaaattcggaattaaaaaataaggaatattaaaagaggagactatagtccatatagaaatacaattaggaaataactgaaattcgaaattaaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaggaaataatagaaattcggaattaaaaatggggaatattagaagtagagtatagagtccatatagaaatacaattaaaaaaaatagaaattcggaattaaaaaaaaggaatattagaagtagaatatagagtccataggaatttaaaactaactaaaattcagaataaaaaggagcctccatgttcgctctcatgatctagaaattgtcacattaattggagaaaaagaaaaaagcagagtctatatagaaatacaatttagaaatagctgaaattcggaattaaaaaataaggaacattagaagaggagactagactccatatataaatacaatttagaaatagttgaaattcggaattaaaaaataattaatattagaagaggagactagagtccatatagaaatataattaggaaataacagaaatttagaattaaaaataaggaatattagaagtagagtatagagttcatatataaatacaattagtaaataatagaaattcggaattaaaaataaggaatattagaagtagagtatagagtccatatagaaatacaattaagaaaaaaaagaaaattggaattaaaaaataaggaatattagaagtagattatagagtccatataggaatttgaaactaactaaaattcggaataaacatgataaaattaaaagtagagtttagagtccgtataaaaatacaatttacaaataactaaaattcgaaattaagaaaaacatgggaagaagattttaaagtcaatataggaatacaatttagaagtaactgaaatttgaaattaaaaattaaagaatattgaaagatgagtttagagtccacatagaaatacaattagaaataataaaaattcagaattaaaaaaataaatattaaaagacgagtctagagtccatataggaatatatataatttataaataactaaaatttgatatcaaaaataattaataactaacatgtatataaaatacaatatgaatattacacattagtagtttcgtaaagttattgtaaaatttaaaattatgttgtcattgtaatatattttaataatataatgagaaaacatatatgctattatatgagagaaaatataatgatgctagccgcgcaatctgcgcgggccaccatgctagttacttttacagtggtatctaccatcactcgtagtattccctactccctccatccaaaaataaaccaacctcgtagtagggtataacgcatcctatatgttcagatttattgtatcctatatattaagatttgttgtattaggatatgtcgcattctaggttgtcttattttacgacagagagagtataacagttgccggatgaaaatccctcgtaggtgtcggattcccaaccagcattaatttggaggcgcctttgcccgttcgcataggtgccagttataaaatcaacacttatagagattataggtgtcaattctatagacagacccgacacctataatctttggaaaaaagggttgtggaggcgcaagggatcaccgacctggtagcaaagggcgacaaagctccttgtagaagtgcttgaagtgtcctagcaactcgtcgacagcggggaaagataggcggtgggccccgggcgtgcagtccctgtggaacttcaataggtgctcatccaccagggttccgagcgttgaacgaggagtccccctgtgcatgagcacgcatgtgcacacacaatgacacgaccacaccttagacaccaccggaccaaatcgttggagggaggaaggggaggggggagtggacattatacttgtcagctttttaattaattaacgcctatgatatattatatgtgtcattcgttttttcaaaatcggtacttatagaattaatgccagcttttcctatagctgcttaaaggtgcataggtgttggttttaaacgaaccaacacttatgagctgatatctattagggattctacagtagtaactccaatattattactatgttagccacaatgctatgtttttaattatgatgtatgttacatgttagtttatacggacccatagtacaaattatggttcacacattagagataaattggtccggtggtagataccatatataggagtagtacatatcatgagttaaaatctcggtctccacaagctgagaaccgcatgtacattgatttacatctatattgctgtgcaggtatctcagcggggaagcggatatgggaggctgggatagcagacgtattgatcttagaggcgacagaccgcattggcgggcggatgcacaagcagagtttcgccggcgtcaatgtggagatcggtgccaactgggtggagggcgtcaatggcgaaaagaagaaccccatttggcccatcgtcaactccaccctcaagctcagaagcttccgctccgactttgacagccttgcccagaacgtctacaaggagtacgtacattttcacacaaccacaagttggtggataaattggagcagctaacaacttgacacgtgattaatcagacatatttctctaatgacatgttttaattgcatatgttgatgtgtgcgaatcatagtacaataattaacacactcatcatcagttgtcaattccaaaccgtcaccactgttggttaattattgcatgcacagcacagcactcagaactgtatcatttagtattcatgcaccattcacttatcaacaagagtaactaataattggatactttgtgcggcccacgaaatggaataattatacttaatttgaaaaagttgatgaaatttcaacaagagatcaaaaatttcaaaatgcaaagcttttttttagattaaaacattcatataaatattggagaaatttcacacaattttcaggtaattaaaacattcatacacaatgttcaagcacaaaacattcaaatatagatcaagagatatatataagtgacttttctcccaacttttggttttaccttgaaactatctaccgtgtaaacatggaatagtacttggaagaaaactaggtattgttggtcaaactttttctctttcccggccactagctatcagttccccatttcttgagtttttttatttcttttgtgcgaggagttccttagtagtaaactatagatagtatgggttctcattggaagatagataggtaaacatgagagggtaaacttataaatactacctttgtcttagaacccgttctaagcagatacatcaaacggctaattagccgcacatgagaaatgtgattagcatataattaattgtattaattattaaaaactttttgatttttaatagcttgtatataaaagaaattttgtaggtaagacatcgtttagcaatttaaaaacatactaacggaaaatgagaaatagctaagttgaattagcacttcagaataaggtcttaaaattagtagctagaaataaaaaaaaattaggacgaagggagtagataaatactaaaccttctaaaccacttaagggcaatcccaacactcaaagggaaaaatatgaagaaactattatttcttatacaagacactagctttaaaggaacaaaaataaggataaaaagaaagagaagggagatgatttgatgagagtttattttaaataaatcgtctatattgggtatatagtttctgcgtacattgtcgatataacatggtatatatgaaaactagtaatagtttttgggttaagattgttctaatgatcaaccttctatttatttcacgctgaatgccacctcacagttgtacgttcgtaggcaagtggccaacaagataacagtgcccggccccatcatgcttatgggaaaccaatcgcaatagcatacaagttgtatcaaattggccataggtaatgtttacatgtgcacatggctttatgagaaaagatggacaatttgcaccatgcataagtgatcgaaaggttagaaatagttatggtaacgttacttctcatcagaagagaaaattggcattaaaaatatttagtggggattcaattttatggatgacgttctctttcgtggtccaatcttctggtgaggggataactctcggtttgatcgagtgcgacatttgcgatatggctaccaaccagaacaaggacatgacgttgtgcaatcgctacaccacaaacaatgtcataccaaccgtgacacacggttgatgatctttacaatgcaaacgagagaacattgcaagaacaagatataagatgcaatctaaatattgcgaataggtaattaagcacaaattaatagttgtgattaaagtgatatatctaatcgatccgataaatcaacacaccaactattaggggctctgaatctattgtcgccgactaattaatcgagcgaggactatagacaaggtgaatggcacttggcaaaatccaactaaaccaaaacacaattgttctagagggtatacatatacatttatagaggaaaatggatctagagttaagtgctaattcatggaggtggagggagacacttttgagatgggactagccatgtcttgttttaaagattcttgttgactcggaatgaatttggatgagaccggatgcgtttgaaagatagcgagataatctttccatcaagtccaggatcacctaaatcggagttggcatggagacgctacgtccgtttgaagtaagtactatctccggaggctgaactgaacttggacttgaaattatcattagaacgtgtgaagttacgtgcgtatccgatgaagtaatgccctcatcgtttattggaacaaatacataatgtcaacataacaaacataatataaattgaaattttgatctttcggaaaaaacaaacgtataaattctcgacaaattaacgcatatggatactgcaagtttctacctgggtccaggaacttatatttgttcaaaccgataaatgtttgtgacatgagtagattctacaccgaacttaattatttttttaaaaaaaataatggaaacttaattaattagtatcatgtatatttttttcctccaatatatatatgctaccatacatatatgcatgttgcctgatgttgtataacttcagcggaggcctctgtgacgaagcatacgtgcagaagagaatggatcgggcagatgaagtggacaagagtggggagaatctctccgccacactgcacccaagcggccgggacgacatgtcaatcctttcaatgcaacggctcaacgatcagtacgtgcctctgcccctcaagtctttacttgaaaaaaaaaacgttaagcacataaaagaacacttcaaaagttatttgattttttttgcgacaaaaagttattcgaattgatttgtcttactgtaagagtatagatagatatagaaaatcgtttgaaatttgtgtaaggactgaactaatcgtatattgggcctcgaaagatgtaggactatcaactaggcccaaaaagacactaaggcctccttcaagatttatagttggaattttgatagatcaatgaacaagttgattttgtgatagctatttgagggtatatacacaaattaattaattaactactacttacaaatttaaaaagttggttcagcaaaacagtatatagaaaactttacacaaaatatccatttagaagcttagaaaacgcgcaaatgaaaaatccaaaatccagtacaagctagctggcctgaataactggcctgacaagcagtacaacatagcactacaagctgtgaatttactttctgctgtttcgggtgcgtgcaaatgcatgcaattggcagcctacccaacggcccgtcgtcgccggtggacatggcggtggactacttcacctacgactacgagttcgccgagccgccgcgcgtgaccagcctgcagaacaccgttcccctccccaccttcaccgacttcggagacgacacctacttcgtcgccgaccaacgtggctacgagtccgtcgtccaccacctcgccggccagtacctcaacgccgacaagtccggcaacatcgccgacgcccgcctgaagctcaacaaggttgatcatatcacttctgatgccatgatcttttctgtcagaaaagatgaactgattaagcacgcgatcatcatggtggtatatatgatcgatgcaggtggtgcgtgagatctcctactcctcgaccggcgtcaccgtgaagacggaggacaactcgacgtaccaggcagactatgtcatggtttctgcgagcttgggagtcctgcagagcgatctcatacagttcaagccacagctgcctgtcagtttctatgtccaaatgtccttgcatgttcaacatatcctcttccaaatataaattaagatgtgcatatcgagcagtcaaatttactttacgtttcttgcatgtttccatcagtcttggaagattcttgcgatctaccaattcgacatggccgtgtacaccaagatattcgtcaagttccccaagaaattctggcccgaaggggcagggagggagttcttcctctacgcgagcaccaggagaggctactacggagtctggcaggtacaaaatatgcagcaatatatacaatccactcacatcgaattgtagtacattgcgatgatctgaacattcttcaggagtttgagaagcaatacccggatgccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccggacagccagaccaaggcagagatcatggaggttgtgaggtgcatgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtccgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagtatgaccagctcagggtacgaactactactccaaccaaatgctaatcacaattcacaaattgatgcggtttggatttgagattaattttggttgtgtgtattttttgctgtttctgtgcacaaggcgccggttgggagagtgtacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatcttgcaggtatccatatgtcagataggccggacatttaaaccatttttattgttctaaaagagaactaccctagggtagggatcgacgagatttgtaatgctaacatttgtgctcaagtgtgcgttgtgcctttgcttgtttttgtcaggtattgactctgcagagattctgatcaactgtgcacagaagaagatgtgcaaatataatgtcgggggcaagcacggctag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0368200, RefSeq:Os09g0368200