BGIOSGA026125

From RiceWiki
Revision as of 06:39, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026125| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026125, complete gene.| tag = P0616D0...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026125

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026125, complete gene.

LocusTag

P0616D06.112-1

Ensembl Transcript ID

BGIOSGA026125-TA

Ensembl Protein ID

BGIOSGA026125-PA

Length

2178

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:23332235..23334412

Sequence Coding Region

23332235..23332378,23332462..23332677,23333030..23333100,23333216..23333452,23333888..23334020
,23334110..23334412

Genome Context

<gbrowseImage1> name=IndicaChromosome07:23332235..23334412 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:23332235..23334412 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCAGCAGCTGGGCCTCCTCGCCGCCGTCTTCGTGTCGCTCGCCGTGCACGTCGCGCTCCACTGCCCCATCCAGCCGCTCGCCCCGCCGCCCGCACGCCCACCCGCCGCCGCTCGCTTCCCTCCCAACAACCTCCTCCAGAATCTGGAGAAGCTTGGGGAAGGGATGCTGAGCGCGCCGGAGGACGTGTACGTGGACGACGCCAGCGGCGAGGTGTTCACGGCGACGAGGGACGGGTGGGTGCGGAGGATGCAGGCGAACGGGTCGTGGGAGCGGTGGGGGCTCGTCGGCGGCACGGGGCTCCTCGGCGTCGCCCCGTCCGCCGACGGCGCCATGCTCGTCTGCGACGCCGACAAGGGATTGTTGAAAGTGGATGAGAATGGACGCGTGACGCTTCTTGCTTCGACTGTCGAAGGCTCCACGATCAGGTTCGCGGACGCGGCGATCGAGGCCTCCGATGGCACGGTGTACTTCAGCGACGCCAGCACCAGGTTCAGCTTCGACAACTGGTTCCTCGACTTCTTCGAGTACCGCTTCACCGGCCGCCTGCTCAAGTACGACCCCCGCACCGGCGAGGCCTCCGTCGTGCTCGACGGCCTCGGCTTCGCCAACGGCGTCGCCCTGCCGCCCGACGAGGCCTTCGTCGTCGTCTGCGAGACGATGAGGTTCAGATGCTTGAGAGTGTGGCTGAAAGGGGAGAAGGCTGGGGAGGCAGAGATCTTCGTGGACAACCTGCCGGGGAATCCAGACAACATTCGGCTGGGTTCAGATGGTCACTTCTGGATTGCCCTTCTCCAGGTGAGGTCTCCATGGCTGGACCTGATCTCTCGCTGGAGCTTGACGAGGAGGGTCATCGCGTCGTTCCCGGCGCTCGTCGAGAGGACCAAGGCGACGCTGAAGGGAGCAGTGGTGGCTCAGGTGTCGTTGAACGGCGAGATCGTGAGGGTTCTTGGTGATTCTGAAGGGAAGGTGATCAACATGGTCACTTCGGTGACAGAGTTCAACGGAGATCTCTTCCTCGGCAGCCTCGCGACCAACTTCATAGGGAAATTATCTTTGGCTAAGGTTGCACAGGATCAGGAGGATGCAGTTTCTTCGTAA</cdnaseq>

Protein Sequence

<aaseq>MAQQLGLLAAVFVSLAVHVALHCPIQPLAPPPARPPAAARFPPNNLLQNLEKLGEGMLSAPEDVYVDDASGEVFTATRDGWVRRMQANGSWERWGLVGGTGLLGVAPSADGAMLVCDADKGLLKVDENGRVTLLASTVEGSTIRFADAAIEASDGTVYFSDASTRFSFDNWFLDFFEYRFTGRLLKYDPRTGEASVVLDGLGFANGVALPPDEAFVVVCETMRFRCLRVWLKGEKAGEAEIFVDNLPGNPDNIRLGSDGHFWIALLQVRSPWLDLISRWSLTRRVIASFPALVERTKATLKGAVVAQVSLNGEIVRVLGDSEGKVINMVTSVTEFNGDLFLGSLATNFIGKLSLAKVAQDQEDAVSS</aaseq>

Gene Sequence

<dnaseqindica>1..144#228..443#796..866#982..1218#1654..1786#1876..2178#ATGGCGCAGCAGCTGGGCCTCCTCGCCGCCGTCTTCGTGTCGCTCGCCGTGCACGTCGCGCTCCACTGCCCCATCCAGCCGCTCGCCCCGCCGCCCGCACGCCCACCCGCCGCCGCTCGCTTCCCTCCCAACAACCTCCTCCAGGTACGGTACGTTGCGTTCTAGCTCGCCGCGCCATGCCGCGCTCATGTCGGCCGTTGGTGGATTCATGGTTAGCGATGTGGCAGAATCTGGAGAAGCTTGGGGAAGGGATGCTGAGCGCGCCGGAGGACGTGTACGTGGACGACGCCAGCGGCGAGGTGTTCACGGCGACGAGGGACGGGTGGGTGCGGAGGATGCAGGCGAACGGGTCGTGGGAGCGGTGGGGGCTCGTCGGCGGCACGGGGCTCCTCGGCGTCGCCCCGTCCGCCGACGGCGCCATGCTCGTCTGCGACGCCGACAAGGTAAATCAAAACAAGAAACATTTCTACGATGATACGCTTCCCTGCTTCAGATGAAGATAACCGAATGAGAGACAGTGCAAAAGTTGTTTACTGTTGGTGTAAAATACTCCCTCGTTCCCTAAATAAGAAAGTATTTTTAAACATGTTTGACCATTCGTCTTATTCAAAAACTTTTATAAAATATATAAAACTATATATATACATAAAAGTATATTTAATAATAAATTAAATGATAGAAAAAGAATTAATAATTACTTAATTTTTTTAATAAAATGAACGGTTAAATATGTTTAAAAAATATCAACAGCGTCAACATTTAGAGATGGAGGAAGTACTTAATTAAAATCTGCAGGGATTGTTGAAAGTGGATGAGAATGGACGCGTGACGCTTCTTGCTTCGACTGTCGAAGGCTCCACGATCAGGTTATCTTCCTGCAAATTACTTGTTTCACTGCAAACTACTATGCAATTTGCACAGTGCAAATCTGTAACTGCGACTGCGAATTCTCTACTGTTCTTCTCCGTTCGTCGTCTTCAGGTTCGCGGACGCGGCGATCGAGGCCTCCGATGGCACGGTGTACTTCAGCGACGCCAGCACCAGGTTCAGCTTCGACAACTGGTTCCTCGACTTCTTCGAGTACCGCTTCACCGGCCGCCTGCTCAAGTACGACCCCCGCACCGGCGAGGCCTCCGTCGTGCTCGACGGCCTCGGCTTCGCCAACGGCGTCGCCCTGCCGCCCGACGAGGCCTTCGTCGTCGTCTGCGAGACGATGAGGTAGTAACAAGCTCAACTTCTCATCTGGGAAATGACACGTAGTCTACTGATTGCAGTGACCTGAGTAACATTTTAAGGTTACGAGTGCAAATCTCCTTAGGAGCGAATTTCAGATTGGATTGTTTGTGGGGCTAAGTTCCTAATTTAAATGGCTGCATATATCTGATTGGATGTAGAATCTGGGTAGAAAATACCCTTCTCTAAAATAATAATAAAAAAAAGTAATTTTACGGTTCATAAAGATGTACCATTAGGTAAAAAAAATTAGTATAAAATTTAGTATCTCATAGTATCTAGATACAAAGAGATATCAAATTAAAATAGAAAAAAATAGTATCTCATGTATCTCCTTAAGAACGGTAAAATTGCTCATAAAAAAAAAGAGACTGTTCACTCTATCGTCAAGTGACCATGAAGTGATATTGTCAAGTGCAGGTTCAGATGCTTGAGAGTGTGGCTGAAAGGGGAGAAGGCTGGGGAGGCAGAGATCTTCGTGGACAACCTGCCGGGGAATCCAGACAACATTCGGCTGGGTTCAGATGGTCACTTCTGGATTGCCCTTCTCCAGGTCTCTGCTCTCTAACCTTTCTGCTGCCATAAGCATCTACACAACATTTTCAGTGCTCAAACTTCACAATTTTCTGTGCTCAACTGCAGGTGAGGTCTCCATGGCTGGACCTGATCTCTCGCTGGAGCTTGACGAGGAGGGTCATCGCGTCGTTCCCGGCGCTCGTCGAGAGGACCAAGGCGACGCTGAAGGGAGCAGTGGTGGCTCAGGTGTCGTTGAACGGCGAGATCGTGAGGGTTCTTGGTGATTCTGAAGGGAAGGTGATCAACATGGTCACTTCGGTGACAGAGTTCAACGGAGATCTCTTCCTCGGCAGCCTCGCGACCAACTTCATAGGGAAATTATCTTTGGCTAAGGTTGCACAGGATCAGGAGGATGCAGTTTCTTCGTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026125