BGIOSGA026185

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Revision as of 06:40, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026185| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026185, complete gene.| tag = OJ1339_...")
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Gene Name

BGIOSGA026185

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026185, complete gene.

LocusTag

OJ1339_F05.134

Ensembl Transcript ID

BGIOSGA026185-TA

Ensembl Protein ID

BGIOSGA026185-PA

Length

4087

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:24042478..24046564

Sequence Coding Region

24042478..24042768,24043302..24043364,24043440..24043528,24043612..24043672,24043858..24043936
,24044309..24044445,24044535..24044693,24044787..24044863,24044951..24045090
,24045188..24045219,24045313..24045387,24045705..24045777,24045893..24045981
,24046092..24046136,24046218..24046370,24046460..24046564

Genome Context

<gbrowseImage1> name=IndicaChromosome07:24042478..24046564 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:24042478..24046564 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGGTGGCGCCCGACAAGGAGGAGGCGGCGGCGGTTGCTCTGGACAAGGCGGTGAAGGTGGCGGTGGCAGCTCCCGACAGGGCGGCGGTGGCCGCGGTGGGCGTCGGGGAGGAGCTCCCCGAGGGGTACGACCAGATGATGCCGGCCGTGGAGGAGGCGCGGCGGCGGCGAGCCGGGGTGCTGCTGCACCCGACCTCGCTCCGCGGCCCGCACGGCATCGGCGACCTCGGCGACGAGGCGGTCGCCTTCCTCGCCTGGCTCCACGACGCCGGCTGCACGCTCTGGCAGGTTCTTCCGCTTGTTCCACCGGGAAGGAAGTCTGGGGAGGATGGCTCTCCATATTCAGGACAGGATGCAAACTGTGGTAATACCCTATTAATTTCACTTGAAGAGCTTGTAAAAGATGGGTTGTTGATGGAGATTGAACTACCTGACCCCTTGGATATGGAGTATGTTGAATTTGACACCGTTGCCAATCTGAAAGAACCTCTTATTGCAAAGGCTGCAGAGAGGCTCCTACTGAGCCGTGGAGAGCTCAGAACGCAATATGACTGCTTCAAGAAAAATCCAAATATTTCAGGTTGGCTTGAAGATGCTGCACTTTTTGCTGCTATTGACAGAAGTATTGATGCATTATCCTGGTATGAGTGGCCTGAACCTCTGAAAAACCGACATCTCGGGGCCTTGGAAGACATATATCAAAAACAGAAGGATTTCATAGAGATATTTATGGCTCAACAATTCTTATTTCAAAGGCAGTGGCAGCGAATTCGTAAATATGCAAAGAAGTTGGGTATCAGCATAATGGGTGACATGCCCATATATGTTGGCTACCATAGTGCAGATGTTTGGGCAAACAGGAAATCGTTTTTGCTGGACAAGAATGGTTTTCCGACTTTTGTTAGTGGTGTTCCACCTGATGCATTTAGTGAAACTGGTCAGCTTTGGAACAGTCCATTGTACGACTGGAAAGCTATGGAAGCAGGTGGATTTGAATGGTGGATAAAAAGGATTAATCGTGCCCTTGATTTGTATGATGAGTTCCGTATAGACCATTTCCGGGGGCTTGCAGGTTTTTGGGCAGTTCCTTCTGAGTCAAAAGTAGCGCTGGTTGGAAGCTGGAGGGCTGGACCGAGGAATGCATTTTTTGATGCATTATTCAAAGCTGTCGGTAGAATAAACATAATAGCAGAAGACCTGGGGGTGATAACAGAAGATGTTGTTGACCTAAGGAAGTCTATTGAGGCTCCTGGAATGGCAGTTCTTCAGTTTGCTTTTGGCGGTGGTTCTGACAATCCACACTTGCCCCATAACCATGAATTTGATCAAGTAGTATACACCGGAACACACGACAATGACACGGTTATTGGTTGGTGGCAAACTTTACCAGAGGAAGAGAAGCAGACTGTGTTCAAGTATCTGCCTGAGGCTAATAGGACTGAAATCTCATGGGCACTGATCACTGCTGCCCTCTCTTCAGTTGCAAGGACATCCATGGTAACCATGCAGGACATTCTTGGCCTCGACAGTTCTGCTAGAATGAATACTCCAGCTACACAGAAAGGGAACTGGAGATGGAGGATGCCGAGCTCTGTCAGCTTCGACAGCCTCAGCCCTGAAGCGGCGAAGCTGAAGGAATTGCTTGGACTGTACAACCGGCTCTAA</cdnaseq>

Protein Sequence

<aaseq>MAVAPDKEEAAAVALDKAVKVAVAAPDRAAVAAVGVGEELPEGYDQMMPAVEEARRRRAGVLLHPTSLRGPHGIGDLGDEAVAFLAWLHDAGCTLWQVLPLVPPGRKSGEDGSPYSGQDANCGNTLLISLEELVKDGLLMEIELPDPLDMEYVEFDTVANLKEPLIAKAAERLLLSRGELRTQYDCFKKNPNISGWLEDAALFAAIDRSIDALSWYEWPEPLKNRHLGALEDIYQKQKDFIEIFMAQQFLFQRQWQRIRKYAKKLGISIMGDMPIYVGYHSADVWANRKSFLLDKNGFPTFVSGVPPDAFSETGQLWNSPLYDWKAMEAGGFEWWIKRINRALDLYDEFRIDHFRGLAGFWAVPSESKVALVGSWRAGPRNAFFDALFKAVGRINIIAEDLGVITEDVVDLRKSIEAPGMAVLQFAFGGGSDNPHLPHNHEFDQVVYTGTHDNDTVIGWWQTLPEEEKQTVFKYLPEANRTEISWALITAALSSVARTSMVTMQDILGLDSSARMNTPATQKGNWRWRMPSSVSFDSLSPEAAKLKELLGLYNRL</aaseq>

Gene Sequence

<dnaseqindica>1..291#825..887#963..1051#1135..1195#1381..1459#1832..1968#2058..2216#2310..2386#2474..2613#2711..2742#2836..2910#3228..3300#3416..3504#3615..3659#3741..3893#3983..4087#ATGGCGGTGGCGCCCGACAAGGAGGAGGCGGCGGCGGTTGCTCTGGACAAGGCGGTGAAGGTGGCGGTGGCAGCTCCCGACAGGGCGGCGGTGGCCGCGGTGGGCGTCGGGGAGGAGCTCCCCGAGGGGTACGACCAGATGATGCCGGCCGTGGAGGAGGCGCGGCGGCGGCGAGCCGGGGTGCTGCTGCACCCGACCTCGCTCCGCGGCCCGCACGGCATCGGCGACCTCGGCGACGAGGCGGTCGCCTTCCTCGCCTGGCTCCACGACGCCGGCTGCACGCTCTGGCAGGTGAGTGGAGCTTCGCATTATCGCGCCCATGGCTAATCGAATCTGCTCGCCGATTAAGCCGCGATTAGCGTCTGATTAGCGAGCTTAATTGCGTTTTTGCGTTCCATTTGCGGGACCCACCACGGTCAGGGATGGTGGGCCATGGAATGCGCTCTGGGCCCTGGTGGGCCGGGGAACGAGACAAAATACGGGGGCCCAGCAAGTGGGCTGCGAGTGCAGCCGGGCCTACTGGCCCAGTACGTGGAGCAAGCATTATCGTCCATTCTCGCTGAAACATACCGATTGTTGTTTGGTACTGAGAATCTGCGAGACCGGGACTGTAGTTGTTTGCTGATTGAAATGCTCACATCTTATCTGCTGCTGTCATGGGATGTGTCCGTCCTGATTGTCATAGCAACGGATGGGAATGTGCACCAAATCACAAGGTTGTTAAATCAGTGCTGTAGCAAACAGGAAGAAGAGTTAGGAGTATACAGTGTTGAAACATGTTATTACTATGTGGTAGCATTCATTGCTTCTGGCCATGCTTACAGGTTCTTCCGCTTGTTCCACCGGGAAGGAAGTCTGGGGAGGATGGCTCTCCATATTCAGGACAGGTGAAACTATATCCAGCTAATCTTGCATATTGTGTGGCAATCATCGAATGGAACTTATACGGGTACACGTTGCAGGATGCAAACTGTGGTAATACCCTATTAATTTCACTTGAAGAGCTTGTAAAAGATGGGTTGTTGATGGAGATTGAACTACCTGACCCCTTGTAAGTTTGAACTCTTTAATGATTAACTGGAAATTCATTTCTAAGGTTGGCGTCAAGCATTTACATTTTTAAATTGATGGTAGGGATATGGAGTATGTTGAATTTGACACCGTTGCCAATCTGAAAGAACCTCTTATTGCAAAGGTTAGTTTTTCATGACTGTTCACTTCAGCATACCTTTCTGTTTCCTCCGACTGGATTTGATTGTTCTACTTCTACACTTCTACTGAGTTCAAACAGTTGAAATGTGTACAGTAATGTTACTACTACTGAATTGATGGAAGCGAATCATTGCATAATTAAAATTATAGATAAATCTTTTCTTCTAGGCTGCAGAGAGGCTCCTACTGAGCCGTGGAGAGCTCAGAACGCAATATGACTGCTTCAAGAAAAATCCAAATATTTCAGGCAAGAAATCTTGATTTGCTAATTTCAAACCATATTGTCTTAGTCTTCCATACTCTTAAATGAGAATAGCAGATACAATATTGTCAGCAAAAAACTGGGTAACACATCAAGTACAAAACTGCAACCTATTAAACCTTTAGTATAGGCATCAATAAATAGCTAGTGTTCCCCGCAAAAAATAAAAAAATAAATAGCTAGTGTTGCTATGCTAGAAAGACCATCAGATAGGTAAACTGGCTCAAATCAGGGGTCAGGTGGTCTGCTTTTACAAATACATGCCTTTTCCAACTAAAATGAAAATAGCAATGATCCTGAAATGTATGCCTGAAATAATATACACAGTACAGTGCCTTAGTCGTTCTTTCCTGCCAGGTTGGCTTGAAGATGCTGCACTTTTTGCTGCTATTGACAGAAGTATTGATGCATTATCCTGGTATGAGTGGCCTGAACCTCTGAAAAACCGACATCTCGGGGCCTTGGAAGACATATATCAAAAACAGAAGGATTTCGTAAGCATTTCAAACTATAATATTTTCATTGCGATAAATTATTACAGAAACAAATGCCAGTGGACTCATCTACTTAACTTGCTATGCAGATAGAGATATTTATGGCTCAACAATTCTTATTTCAAAGGCAGTGGCAGCGAATTCGTAAATATGCAAAGAAGTTGGGTATCAGCATAATGGGTGACATGCCCATATATGTTGGCTACCATAGTGCAGATGTTTGGGCAAACAGGAAATCGTTTTTGCTGGTACACCTCAATAATTTTCCCTCATAGTCATGTGTCATCGGATTCTTAAAATGCTATACATTCTGTTTCTTGATTGTTTTTTCTGGTGTAAAGGACAAGAATGGTTTTCCGACTTTTGTTAGTGGTGTTCCACCTGATGCATTTAGTGAAACTGGTCAGCTTTGGAACAGGTAATCCTTTGCTCCCTGTCAATGTGATCAGGAAAAAAGTTGAATACAATTAACAGCATTTCCTTTGTGAAACTTGCAACTTTACAGTCCATTGTACGACTGGAAAGCTATGGAAGCAGGTGGATTTGAATGGTGGATAAAAAGGATTAATCGTGCCCTTGATTTGTATGATGAGTTCCGTATAGACCATTTCCGGGGGCTTGCAGGTTTTTGGGCAGTTCCTTCTGGTAAACCAAATACATCCAGCTAGCCTGTCTACATAATAGGAGTACATATTTTTGGGTAAATAGATTCAAATTTCTAATTTGTTACCGGTGCATGTAGAGTCAAAAGTAGCGCTGGTTGGAAGCTGGAGGGTGAGCATTGACTTGATGTACATGCTATCCCCCTTATTTTTTTCAGAAATATTTGTTGCTGATGTACGCTTTTCTGTTTTTCTTTGGCAGTAGGCTGGACCGAGGAATGCATTTTTTGATGCATTATTCAAAGCTGTCGGTAGAATAAACATAATAGCAGAAGACCTGGTAAGCATTCTTTTTTTTTTTACATTTATCTAATAAAACCATGATTGGTTTTTCTTTTGTGGACCAATATGGAAGTAGAAATTCACATAATTTCTCCATCAGACAAGTCTTATTCGAGTCAGCTACACAAGTTTTATCTGCAACCAGACATTCATAAGCTACTCAGCATTAGCTGTAGATTGTCAAAAATGTGATTTAACTGAGAATTCCTCATAATAATCACGGGTTAATATAGTCGAGAATGGTTCTACTCAAAACTTGAAACATTTAATTCTGACATGCTTATGCTTTATCTGATCATCTCATACTATTTGTAGGGGGTGATAACAGAAGATGTTGTTGACCTAAGGAAGTCTATTGAGGCTCCTGGAATGGCAGTTCTTCAGTTTGGTAATGTTCCAAAGCCAGATTATGTGTATATTCTCTTTTGAGAAGGCATTGTGAGCATACTTGAATATATAGATTCGATGTCTAAATGTTCGTACTCCCACTTTTATGTGGTCAGCTTTTGGCGGTGGTTCTGACAATCCACACTTGCCCCATAACCATGAATTTGATCAAGTAGTATACACCGGAACACACGACAATGACACGGTTAGTTTCTAAATTATTCCAAAGCTGTCTATTTTCAATATCTTGTCAAGGACTGCTAGCGACACAAGCATACAAAGAATGCTGACGCTCTTCAACCATGTATTCCTCAGGTTATTGGTTGGTGGCAAACTTTACCAGAGGAAGAGAAGCAGACTGTTAGTGTCTCCCAACTTTCTTAAATAGGCATATTACACTACCTTCAACCATATTGTCAAATTCACGCCTTCTTGTTTCAGGTGTTCAAGTATCTGCCTGAGGCTAATAGGACTGAAATCTCATGGGCACTGATCACTGCTGCCCTCTCTTCAGTTGCAAGGACATCCATGGTAACCATGCAGGACATTCTTGGCCTCGACAGTTCTGCTAGAATGAATACTCCAGCTACACAGGTTAACAGCTGCATCCAATCACCTTGTATAATTCACATATACTGCTAAAGCAGTAATTCTAAAAACATCATTTTTTTTTACATCCACAGAAAGGGAACTGGAGATGGAGGATGCCGAGCTCTGTCAGCTTCGACAGCCTCAGCCCTGAAGCGGCGAAGCTGAAGGAATTGCTTGGACTGTACAACCGGCTCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026185

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA026185&oldid=51779"