BGIOSGA026262

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Revision as of 06:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026262| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026262, complete gene.| tag = OJ1316_...")
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Gene Name

BGIOSGA026262

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026262, complete gene.

LocusTag

OJ1316_A04.107

Ensembl Transcript ID

BGIOSGA026262-TA

Ensembl Protein ID

BGIOSGA026262-PA

Length

4233

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25074512..25078744

Sequence Coding Region

25074512..25074622,25075546..25075710,25075789..25075907,25076195..25076269,25076699..25076792
,25076875..25076934,25077110..25077175,25077258..25077356,25077927..25077971
,25078408..25078510,25078668..25078744

Genome Context

<gbrowseImage1> name=IndicaChromosome07:25074512..25078744 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:25074512..25078744 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCCTTCTTCTTCCGGGCGGCGTCGCGGCCGGCGCGCCCGTCGCCGCAGGAGCTCGTCCGCTCCATCAAGGAGTCCCTCCTCGCCCTCGACACCAGGACCGGCGCCAAGGCTCTTGAAGATGTTGAGAAAAATGTATCTACTTTGAGGCAGACACTTTCTGGCGATGGAGAAGTTGAACCAAATCAGGAACAGGTTCTACAGATAGCCCTTGAAATTTGCAAGGAGGATGTCCTTTCGCTCTTTGTTCAGAATATGCCTTCCTTGGGTTGGGAGGGTAGAAAGGACCTTGCCCACTGCTGGAGCATTTTGTTGAGGCAGAAGGTTGATGAAGCCTATTGCTGCGTGCAGTATATTGAAAATCATTTTGATCTTCTAGATTTCCTTGTAGTTTGCTACAAGAACTTGGAAGTTGCATTGAACTGTGGGAATATGTTGCGAGAATGCATAAAATATCCTACACTTGCAAAATATATATTGGAGTCAAGTAGCTTCGAGTTGTTTTTCCAGTATGTTGAATTATCGAACTTTGATATTGCTTCTGATGCTCTGAACACCTTCAAGGATTTGCTCACCAAACATGAAGCCGCAGTTTCTGAGTTTCTGTGCTCCCATTATGAACAGTTCTTTGAGCTCTACACAAGACTTCTAACTTCAACTAATTATGTTACAAGAAGACAATCAGTGAAGTTTCTTTCAGAGTTTTTGTTAGAGGCCCCAAATGCTCAAATAATGAAGCGGTACATTGTGGAAGTCAGTTATTTAAATATCATGATTGGCCTGCTGAAGGATACAAGCAAAAATATCAGGATATGTGCCTTCCACATTTTCAAGGTATTTGTTGCCAATCCAAACAAGCCTCGTGATATTATTCAAGTTTTGGTAGACAATCACAGAGAACTGTTGAAGCTACTAGGCAATCTTCCCACAAGCAAAGGTGAAGACGAGCAACTTGAAGAGGAGAGAGATTTAATCATCAAGGAAATCGAGAAGCTTGTGCATTCATCGGTATAG</cdnaseq>

Protein Sequence

<aaseq>MSFFFRAASRPARPSPQELVRSIKESLLALDTRTGAKALEDVEKNVSTLRQTLSGDGEVEPNQEQVLQIALEICKEDVLSLFVQNMPSLGWEGRKDLAHCWSILLRQKVDEAYCCVQYIENHFDLLDFLVVCYKNLEVALNCGNMLRECIKYPTLAKYILESSSFELFFQYVELSNFDIASDALNTFKDLLTKHEAAVSEFLCSHYEQFFELYTRLLTSTNYVTRRQSVKFLSEFLLEAPNAQIMKRYIVEVSYLNIMIGLLKDTSKNIRICAFHIFKVFVANPNKPRDIIQVLVDNHRELLKLLGNLPTSKGEDEQLEEERDLIIKEIEKLVHSSV</aaseq>

Gene Sequence

<dnaseqindica>1..111#1035..1199#1278..1396#1684..1758#2188..2281#2364..2423#2599..2664#2747..2845#3416..3460#3897..3999#4157..4233#ATGTCCTTCTTCTTCCGGGCGGCGTCGCGGCCGGCGCGCCCGTCGCCGCAGGAGCTCGTCCGCTCCATCAAGGAGTCCCTCCTCGCCCTCGACACCAGGACCGGCGCCAAGGTACTCTCCCCGCATCCTCCCTCCCTCGCGAGCTTCTTTCCTTAGTCCGCACATGCATGAGATCTTGGTTGATTAGTGCTCGAGGTGTCGCTTGCTTTAACCGTAGCTTGTGTGTTGAGATTGAGTGTTTATCTGTCTGGAACTCTGGATCTTAGTAGATGTTAGTGCCTGAGGTCGTTGGTAGTGCAAGATGTGCTTTATTTTGGTCGGAATTCGTCCTACCTACAGTGTAGCAAACCCGGAATGCAATGTAATCCGTGTTGGTAGAACCGTGGGATTAGTTTTTTGGGTTTAAATCTTCACCGATACTGACCTTTGGATGCTATGGCCTGTGCTGAGATTGTGCTTACCATTGGAGTGCTCATTTTTACCCCCAATTTAGTGGCGACGAAGGCGTCAATGTTAGGGTGATTCAAGCTTATCTATGATGGAGTTTGGTTGTACTTCACAAGGAAATAGGCAAAATAGCGCAATAAATTGTTGGTTCATAATGTGAAACAAGAATAATGCCTGATAATTTTTCAAAATAAATTTGCTTGAGCAGGTCTAATGAAGATTCAGGGCATGTACTTAGCTCAAGTCACTGATATTGATTCGGGAAAAGGGGCTCTTGTTTTATTTATTCGCTGCAGGGACTAACTTGGTACTACTTGGGATCTTTGAGCAACTGGTTTCCGTGTATCACAAAGAGTTTCAAGAGTCACATTACTTGTAAAATATGCTTTCTTGTTGAGAGATTCTTTTTAACAGTGTTGATATACCAGTATATTGCATATGGCACTTGCATCTGGAGCCTACTCATAAGCAATGGCATATTTGTTCCTTTGTTTTACTGTTCTAGTTGTTTTATGCTCTTCTTTATACACAGAACACGATTCTACAGTCCCACTGGTTATCTCACGTAGTATTTGTTTTCTAATTAGGCTCTTGAAGATGTTGAGAAAAATGTATCTACTTTGAGGCAGACACTTTCTGGCGATGGAGAAGTTGAACCAAATCAGGAACAGGTTCTACAGATAGCCCTTGAAATTTGCAAGGAGGATGTCCTTTCGCTCTTTGTTCAGAATATGCCTTCCTTGGGTTGGGAGGTATGGTTTCATCAGTTGAATTTGATATCCCTTTCTGTTCAAGCTTACTCGACTTATTAGTTGAGTTCTATATTGCAGGGTAGAAAGGACCTTGCCCACTGCTGGAGCATTTTGTTGAGGCAGAAGGTTGATGAAGCCTATTGCTGCGTGCAGTATATTGAAAATCATTTTGATCTTCTAGATTTCCTTGTAGTTTGGTAAGGCCCATATGCTCAAGTTTTTTTATGGAAAACAATCAATATTTAGCACATGCTAATTCGTTTATTGGTAGTAATGCAGATATAACACCATCCAAAAAAATGTCTATTTGCTGCAACAAAAAATTCCTTCTTTTTCCCCTTTCCTCGTGGTCCCATCATTCACGTCAATTTATTGCCGTCAGTCCTCACCTATAACTACAATATTAATTGTATTTATTTATGACTATGTCTACTATTATGTCATTGAATATTTTCCTGGAAGCTGATTGATTCTCTTGCATCAGCTACAAGAACTTGGAAGTTGCATTGAACTGTGGGAATATGTTGCGAGAATGCATAAAATATCCTACACTTGCAAAGTAAGTCTTCATAAATTTTGTTTCCTTTGCATAAGTATTAGGGATTTAATTGAGCCTTGTTTTTGTTGCCTGCTAACATACGGTATCCAATGGGTATGCCTTGAAGAAATTCTGTGGTTGTATAAACAGAAACAGTGAATCAATTTAGCAATTTGCATACCATGGCAGTTACCATACTACTTGCTAGTTCCCCTCCCCTGTTGATTGCTTACTAAATTGATATGGTTAATTTACAAGCATTATGAAGTACCCTTTACTCCTTTCAGTTTTACATTCTGGAATGTATCAATGAACAACTTGGGTTTGTTATCAGCTATGAGATCAGTTAACTAAACCATGCTAGAAAATATACCAATAATACCATTTAGTTAATAATAAATCAATTAATTGTACATGCATTGAATATTTGATTTTGTAGCTCTCTTTCAGATATATATTGGAGTCAAGTAGCTTCGAGTTGTTTTTCCAGTATGTTGAATTATCGAACTTTGATATTGCTTCTGATGCTCTGAACACCTTCAAGGTAAACCCAGTTTTATTATAACTTGGTATTTTATGCTTCGGTTCTTCAAAATTGATGTTTGTTCTTGACAAGATTCTTGCAGGATTTGCTCACCAAACATGAAGCCGCAGTTTCTGAGTTTCTGTGCTCCCATTATGAACAGGTTAGCTGGAGTGTTATCTTTTGTGAAATGTGTTTATTTATGATGTCCTCACCCTTTTCCCTGCCTTGTTGGCACCATCATTTATTCATTTGTACATGACAATTTTTGGAATCATGCAACTTGTCTATATTGCTATATCTTTTAATACTGATAGATACCATGTGTTCATTTGCAGTTCTTTGAGCTCTACACAAGACTTCTAACTTCAACTAATTATGTTACAAGAAGACAATCAGTGAAGGTTGGACTAATTTGGATTAATATATTCAATTTATTATTGCGCATCAAAAGAGGAAATCTAAAAGTATTGTGCTTCATTTCAGTTTCTTTCAGAGTTTTTGTTAGAGGCCCCAAATGCTCAAATAATGAAGCGGTACATTGTGGAAGTCAGTTATTTAAATATCATGATTGGCCTGCTGAAGGTATTTGATTAGTAGTTATATGCTTCCTTTTTTTTACATTCAGAAGTCACTAATGTAGTAATTACCCATTTTTGCTTTCACAGCTTTTCTTTCCTTCCTTTTTTTTTCTTTTTTGACAATTCTGGATATTAGTGCTACCAGTATGAGAATCGAGAAATCCTGCTTTCTTACTGTATTGTCAACCAAAGGATTTCCTAGGTTAGAATTATAAACCTGTAACTATTCTTAGGTCTACCAGAGCCCCTAGGTCCAGAGCTAAATGGGTTTCTATTTGTTGCTAAGTTACATGTCATCATCATTTGCAGTTTAGCTGATAAAGATCGAACACTTGAATGCCATATTGGTCATAAAGTGGTAATTGGTTGAGCAACCACATTGCTTTTCCAGTATATGAAAATAGTACAACTAGTCAACACTCCTGAGGAGAACAGGGTTTAAAGTTTTGTGTTGAGGCAATAGATCCATGGCTAGAACACAGTTACCGATGACTTCCTTTGCTTCATGGTAATCAGTTTTTCATGGCTCTGCACATCCTATCTTTATGGCTCAACTAAAGTGAAGCTTTTGTAGGATACAAGCAAAAATATCAGGATATGTGCCTTCCACATTTTCAAGGTAATTTTTATCCTTAATCTTTTGACCTTTGTATTCGGCTAGCTATAACTAACCATCTAATGCCAAATAAATCAATACCAGTTGTCAATTATCACATAATCACCATTTGAAATTGCTTGCTTGACCCTTCAGTGGCTATAAGTTATAACCTCCATGGAGTTTTGTATTTCTTCTGATATAACTTTCCAACGGAAATTTCCTTTGTTGCTGATCCTGTAAACATTTCGTTGAATAGTTCGAAATCTATTCCATTTGGCACTTGATGTGGTTATTGTTATAGTGCTATCTCATCTAATCAAGTCGTTTTTGTTCTTGATCACATGTTGTTTGATTTGTGAAATTTTCTGTTGAACTTGATATTGTTAGTCCATTGTAATAGGATAAGCACCTCTCTTTCACCATTTTTTGGGGTTTCACTTTCACTGCATGTAAGCAGGTATTTGTTGCCAATCCAAACAAGCCTCGTGATATTATTCAAGTTTTGGTAGACAATCACAGAGAACTGTTGAAGCTACTAGGCAATCTTCCCACAAGCAAAGGTAGTTTTTACTCTCAACTTCCAGCCTGATGCCAGAAATGGAATAGAGTAACCAAGCATTATGAGTTATAATTGCATCTGGGTGTTTAAGGAAGATTTCTTGTTAAATTGTTGAGAGATGCAAGTTGTGGCACTACTAATTGCGCTCTTTTTAATAGGTGAAGACGAGCAACTTGAAGAGGAGAGAGATTTAATCATCAAGGAAATCGAGAAGCTTGTGCATTCATCGGTATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026262