Os12g0158600

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0158600| Description = TB2/DP1 and HVA22 related protein family protein| Version = NM_001072736.2 GI:297612705 GeneID:4351553| Length = 662...")
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Gene Name

Os12g0158600

Description

TB2/DP1 and HVA22 related protein family protein

Version

NM_001072736.2 GI:297612705 GeneID:4351553

Length

6620 bp

Definition

Oryza sativa Japonica Group Os12g0158600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:2927069..2933688

Sequence Coding Region

2927132..2927163,2927359..2927457,2930794..2930838,2930936..2930999,2931127..2931372

Expression

GEO Profiles:Os12g0158600

Genome Context

<gbrowseImage1> name=NC_008405:2927069..2933688 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:2927069..2933688 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgttgggggagctcctctccaggatcctgctgctgctgttcgggtacgcgatgccggcgttcgagtgcttcaagacggtggaggcgcgccccaacgacgcccacatgctccgcttctggtgccagtactggattattgtggccatggtaatagcctttgagagcctcatctcatggatgccaatgtatggagaaattaagctagctttctttgtttacctgtggtatcccaaaacaaagggaagtgatgttgtatatgataccttccttcggcccattgtaatgcaatatgaaccaaacatagaacagaggttactgcatctgagggcgaaatctgggcagctacttagcttctacatgaagaactttgccgacaaggggacagctttcttcatggatgtcctgcgctatgttgtctctgataaacctgagggatccaatcaagaggtaatgccatttttacctgtcaacatagcatgcacttaa</cdnaseq>

Protein Sequence

<aaseq>MLGELLSRILLLLFGYAMPAFECFKTVEARPNDAHMLRFWCQYW IIVAMVIAFESLISWMPMYGEIKLAFFVYLWYPKTKGSDVVYDTFLRPIVMQYEPNIE QRLLHLRAKSGQLLSFYMKNFADKGTAFFMDVLRYVVSDKPEGSNQEVMPFLPVNIAC T</aaseq>

Gene Sequence

<dnaseqindica>64..95#291..389#3726..3770#3868..3931#4059..4304#ttcctcctcttctccgggcggatcccgctgccggtgaggcaagccgcattccggtccggcgagatgttgggggagctcctctccaggatcctgctgtgagtcgcactctctgcctctctctctctctctctctctcgattcatggttcttcctggccatctatcaatgggcgaacgggtgtgtggtggttttcctcttgttcgtcttcgttgcgtgtggtttgctgattccgtgctccgtttttttttttggttgggtttttggtttgggattcgtcggtggtggtgcaggctgctgttcgggtacgcgatgccggcgttcgagtgcttcaagacggtggaggcgcgccccaacgacgcccacatgctccgcttctggtgccagtactggtaaaccccttctccatcctcgatctcctcctctcgcttctgttactactgctttttttttctctgatgggttcacctttcaatcgcgctgtgaatagctttagtctttcttttttttaacccttttgatgtggagtgagatgcaaacttggatagcatgattttctgtgatataccatcatgtcaactttaatcccttcttacctttagccttttgcttcgtaagatggatggtatttttatgtgtatcttagctaaaagttcatgcgcaatgatatactccgccaacttttctgtttcctgcagtctcttccctttagtttttttctctaaatgttagtagatgtgtttagttattttgtgttctcttaataattggatgttaggtgaatgatggtatgaccataatgccatgtacatatagtttagtatcaatcaagaggggctttctaattcctctttaacttttataattttgatggattagattggcagttctatgctttttttttccacggaaaattggaagttgttttcgttccatttccagttcgttggcttctatcttagaagaggcaatgaaactgcgtatattagtatttgttgatatgcttatcctgaatcaatgctctggattggcatggaatgagatattctgattcattttcctctgcatgatatgaagacctgcagtcaaattgagttcgctctgcaattttgcaccattaagttaatttcaagaaaaataggatgtccatggaccatctatatataattgtagacatagacaattggttgctagtgagggcgggaaagaaattccaacattattgctacaagtttgaactgactcacatcatttctgattttagcaattagttattgttatcctggtttaatttgcttgtttccgtttgaactgttttattttttcaccaaagtttgtttattgccattccaattggagaagaatattccaagtcccttttgcaccacattccctttggaacattttaggctttcaggtttcagccattcaagtctagaactatccaaaattgtagggctggacattttatgcattctgttgaaaggattattggcctcagaagcataaatatgtttatttttaacctagacctactgtcctgttccctatcattgtagtgaagaaagcaggtatcttactaatgactctgattgattattcatcaacttattgaatctgattctcaacagaatcagtagtcactactttacgtctttaccatatagcataatatataagagtattaggaaattccttcattgagcaccttctttaataattaattgaccctaaaccttatggaattttgataagaaatgaagtatttctgacaccttagcctgaaagttttaaattccagaactgaatgatggtccatgtctccactccaattgatagtttttagtagtaataatgcatcagttggacatgaaaacttaaatatttctaaggtttcttgctaatttagtttggttgttgctagtcccttgatcccttccttatgttcctaaaagaaactgtcgctggtattcaagcattttatattgtttctcgtcattcatctgttatttcaatccacctgcatgtttgcacttcagatatatgtgttgaagaaatgttttaggattatgtgtgtacaatacaaacacctcgtctgttagttttatagatgttactaaacttgaaacagggttctttgttcttgttttttatacttgggatgtatgctagtagtgattactagttgaatggtcacatctcattttctgcgacaaatttttggttcatcaaatcccttggcttatttaacaatgtcaatatggttgagcacctagttattctttttgctgttgctgacataagatgattgatttttttgtaaaacagacgcattattactcatatgctattttacctatatgatccaagaaataagcatgcctggtctatttcaacgactgactaaaatatggaaggttctgatatgcaattgtattcattttattctgctgaattgactgatctgtagaccaattcaaagtgtaccattgacttcaatccctctgtggaaaagtcgtttattgcaatattttttatgtgattacctaacacatgtttgaggctctctccttaccataaagaaatatacaaacagaataagaaggcccctttcgattgcagactaatgttcagaacacagagagagagttattgatatgcacatgagaatatgctatgcctggctaattttgagttttcttgtgcccccatttgactattattgttttgttaagagttgactcagtaggtatcttttttattttttgaaaactaactcagtaggtatcagtaattagttttcttgtgcctccatttgactttcagtactagccaatggtttattagttcttacattctatttgttggaatagcatggctttccataaaatgtttgcatgaaacatttaattcaagaggttgttggagattgtagtcaactatgtttataacatatctgtagatcctattctggtttgggatagagaaggcatcattggcatgtgatattacaacaaaacttgatatgggtgatttctttcatgatattttagtgtggtgataggtaatgatactcatcgatgtttttacccaggagcatgggtggcgatctagtctacggattgatagtcactaatatctatgtttcgtgatgggggtttagttttgttcttttattggctgtgtgcattttatgcagaggccgggggtgagctcagttgaaatgtatcatcttggtgtatttgactgagtcttaataaagcttctattatctaaaaaaatgatactcatcgcatgctaaattggcaagggtatatataccgcaacattttcagagaaaatatcttgtcgagtttcaatttttcgtttgcttgaatggcattttagtaaatgcagtggtacagcaaagaagagactttaaacattcactgaccagttgcgctttgggcatcaaacagaagttgacagagtgcttaagtttccagtactgaactaaacagttaaaagttgcgctaacatagtagattgaccactacgtctttctacctttttttttgtgtggaattcatggggttgtgagggttgttaggttatgtaccacatcagcatacagggttaatactgctagttttcagctctatgaacaagaatttgtttactttaaatttgtttgaggttcaagtatccaataggctaacagttaatgtcttgtctgtgaatgttggcaggattattgtggccatggtaatagcctttgagagcctcatctcatggttagttcagttctcctctgattttattttttttaaaaaaaacttcctgtgttatagatttcttgcttatgcatgtgtactattatatgcattccaggatgccaatgtatggagaaattaagctagctttctttgtttacctgtggtatcccaaaacaaaggtaacaaagtacactgtttctgagctttgatatctctttaaatcccgttgtgcattcacttttcgatcaaaaatccacatgtacattttcgtcagtaacacccgtctgaatttaaatgcttctgcagggaagtgatgttgtatatgataccttccttcggcccattgtaatgcaatatgaaccaaacatagaacagaggttactgcatctgagggcgaaatctgggcagctacttagcttctacatgaagaactttgccgacaaggggacagctttcttcatggatgtcctgcgctatgttgtctctgataaacctgagggatccaatcaagaggtaatgccatttttacctgtcaacatagcatgcacttaaatgacacattttcatcttttcaggcttttatcctccattttttttttctgcatgagctagttctgttacataagtttagaaaaccttatttcctccttttagctaagtttttatgagttcatggatttggttatactgaaaaaacttttaacatgcattttctcatgtaaatcagtctattcttaatgtatgttcatctcctgtccataacacaacataaagtacctgtgaataggataatatttattctaaaagaattttttatgcacaaagcactggttgatttcttcttggtcaaattttaatttaaaaaatactgagacttattttaatatcagatgtcagcatcagatattaccagaaagtccagacttagtatatgctgtcaggaactgaataggtcgttttttactttctattgaatcaggcattctgtatctttcataaccaaagtaacacaattgaagaactacttttatttactaccagaaattaatactcttaacatcagaaaagtgtttttgtttaccatatggtttgtctcaaaaggactacaaattattcgaagttgctttcttactcttaagaacatagctatgcactccggtgatcagaatcctcaaaatacaattagtcagcaaactcttcttttccataaaccatgacaccaactgttctcacatttcttcagccaatctcatcttttccataaaccatgataccagctgctcttcccttctggagaaacttcaccatgcgccaaaacaaagtgttaccatttatggtggtctcctccaaccctctgcaaaaaccactcctccccctttgtttccctctcattgcccccacagtgacaagcagacaggagcattatccaatccgtccatccattcatatgccagggacctgttccttcttcccaaatcccaatcccaatttaagttcatggctcgcccgtgcggcccctgcccttgtcagcactcgctgctttcgctcaattgggccttaccaggacagtgatgctcaaccagctgctgcagcctgcagtgttgtagggaagaaaaaccaccccgcaggaaacgtggggtaatgtctgctcaagagccaaagggccaaccatgcaaatgcactcattcccttccacataaccaaaacttgtctgatttctgtcatgttacaacacctgccttgcaaatgttgctatctcctgttttgcatggatgttccattcattcttaatactccctccgtactaaatataagcatttttagctataaatctggacaaccatgtgtccggatttgtaactaaaagttgctatattttaggacggatgtagtagtatgttctatcaaaccaggactccactattccaatgccctgaaccccttgagtgcaaactatagaagccaacattcagtaacatatattcctagtaaacatatgggatattttaggggacaatttctacctgatgacccacaagtaagtaaaatctagaatttagataaagtgagtcaactaatacttatgggtcggcctgggtctatccctacctattcttttttcaagagagaatacgtgaggaattaatattacactaataactaatcagcacatgccatgtcaaattggtcgcgggtgacaattggtggttgtgtgcctgtatgatcttacgatggtcctgtatataaaaagctcaagtcgagctccgacaaagctgcatcaacacaaaccaacgtgtccaccatacggacatgtgcttccccacatgtgcacgaatcacaacgaatgaaaaaatgagatgcacactggagtctggagacgatctgaaacacaagcagtataacatacattgacaatggttctgatccctctctgtttccatatgcagcagcgcaacaagaagtccggcggctggagccccttcgcgaccaaacgccggccaccgtcgccgccgcggccgccgcaggagtccctcttcgagagcaaccccgaagccgccgccgtcgccgaagttctcaaggcaaccatcaaccccaggccccggcgaggagcgcagaatggcaagaattactattagagaagaagatccagcgactcttacaaacagttttagaagatgatgatgatgattgctgtacatagaatgattcatcaaagaaaaaaaagagagagagaagagattgagattgggtacatagaaaaattcagcagtatatccaatgtgaaatgaaacagatgtgtccatgatgaaagcatgttgtatatgctttggtgatagaaattaaatcgtttctctttattttttcccc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0158600, RefSeq:Os12g0158600