BGIOSGA026266

From RiceWiki
Revision as of 06:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026266| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026266, complete gene.| tag = OsI_271...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026266

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026266, complete gene.

LocusTag

OsI_27107

Ensembl Transcript ID

BGIOSGA026266-TA

Ensembl Protein ID

BGIOSGA026266-PA

Length

3504

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25112205..25115708

Sequence Coding Region

25112205..25112253,25112880..25113014,25113530..25113654,25113734..25113802,25113906..25113974
,25114271..25114333,25114456..25115240,25115306..25115708

Genome Context

<gbrowseImage1> name=IndicaChromosome07:25112205..25115708 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:25112205..25115708 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATAATAATGCTGATGTCTCCACACCAACATTGTTGTCAATATCAGCTCTGGTTGGCGATGTTACTAATTTAAGTGCCGAGGAATTGAGAAGAAGGCAGCAACGTGAAATAAACAATTCTTTGAAAGTGGAAGGATGGAATGAATACACATTTCTTGGATGTGCTAATACAGCTGGGTCAGCTTGCAAGAAAAGAGTCAAAGCTTCATCACTTGATAATGTAAAAGCACAATGCCATATGATACTTGAAGATAAACGAATAGAGCTGAAGGAGTACTTGAATGATCTGTGTCACGACAAGCACAAGGTTATTGATAATATCTGTAAGAAATATGAACTAGAAAATATAGAAATCACTAATGCCAAAAAACAAAAGGCAGAAAAACTCTCTAGGGAAATGAAAAACAAATGTAATAAAAAGATGCCCAAGTCACATGGAGCAAAGGTGTTGAACACCATGAGGTTCTTCCATACAACTCCTTCTAAGGAGAAATCAAAAACAAAAAAGTTCAGAGATCCAAAGGATGGTTATCCAGGAAATTCAAAGGATGGAAGTTATCCAGGGAATACAATCACAATGGATATGGATAAAGACAACCTGCCTGCATTTAGGCGTAGTTTTAAAAGGGCAATTAAAAAAGGCCGAGCATGGTGCCAGGCAAACAGCAATTCGGTTGACATATCAGGACTCTTTGGTCCCGGAGCCGAAGTTTATACAACCCCCGCAACCGGAACTTTGCATGTGAAGCTTAGGAACAAAGGGCGTGAACTTACACTCTTCTTCCGTGGTAGAGACTTATACCTGAAAGGGTGGAGAAGTGATAGGTTTGGTCTGTTTGCTGCCCACCCTGATAGGTTTGATAAGAAGGATTGCTTCATACAAGACAAAGCTTGCAAACACCTGAACATCGAGGATAATTATCATCAGCTTGTTCCAGGAGGAAGAATCGGGAAAGTCAGAGTGGGACCCCTTGCAATGCTAGACTATTTTGAAGTCCTTCACAAATGCAATGGAATAGTGACAACAGATGTTCTGGGGGCTGTGGCTGGATTTGCTGTTAACTTCGCAGAACCAATACGCCAGGAAGATGTCTTGGAGGATATCTTAGAGTCGTTTGTTCATTTTGATGTGGCTATGCTGGATAGCAGAAGGGCACTATCCTTGGACGTAAGGAAATACGACCACTACTCAAGGGAGTTTCTAACTGGTGTCGATTGCTTATTGCACGGTAGACCAATGCCAGAGATTTTGAAGCGTGAGGAAGTTACAGTCAAGTCACTCCATGAGTTGTGTTGGCATACCCGTCTGGTCTCCCCCCCTACCCTGATGGGAATAATTGGGAGGAGGAGGAAGATGAAGGAAGAAGAGGAAGAGGGAGATAAAGAGGAAGAGGCTGAGGAAGAAGAGGAAGAGGAAGAAGAGGAAGAGGCTGAGGAAGATGCAAACCACCGTGATCTAAAATTCACAAGCCAACAGGACTTCTTTTCAGTTGGGATGAAGGCTAATGAAATCAACACCTCTTGTCTCTGTCGTCCTTTCTCTGCAGTTGCCTCAGGTGGGATGAGGCCCCTTGTTGTCCCTCCAAGTCAGGGTGGGGAAGTCCAGAGCCGGTTTCTGAGCAGGAGGCCACAGTGGTTCTCCAGATTCATTAATGGACCAAGGGCTGCGTGTTTTTTGAGGAGGCTACTAAAATAG</cdnaseq>

Protein Sequence

<aaseq>MDNNADVSTPTLLSISALVGDVTNLSAEELRRRQQREINNSLKVEGWNEYTFLGCANTAGSACKKRVKASSLDNVKAQCHMILEDKRIELKEYLNDLCHDKHKVIDNICKKYELENIEITNAKKQKAEKLSREMKNKCNKKMPKSHGAKVLNTMRFFHTTPSKEKSKTKKFRDPKDGYPGNSKDGSYPGNTITMDMDKDNLPAFRRSFKRAIKKGRAWCQANSNSVDISGLFGPGAEVYTTPATGTLHVKLRNKGRELTLFFRGRDLYLKGWRSDRFGLFAAHPDRFDKKDCFIQDKACKHLNIEDNYHQLVPGGRIGKVRVGPLAMLDYFEVLHKCNGIVTTDVLGAVAGFAVNFAEPIRQEDVLEDILESFVHFDVAMLDSRRALSLDVRKYDHYSREFLTGVDCLLHGRPMPEILKREEVTVKSLHELCWHTRLVSPPTLMGIIGRRRKMKEEEEEGDKEEEAEEEEEEEEEEEAEEDANHRDLKFTSQQDFFSVGMKANEINTSCLCRPFSAVASGGMRPLVVPPSQGGEVQSRFLSRRPQWFSRFINGPRAACFLRRLLK</aaseq>

Gene Sequence

<dnaseqindica>1..49#676..810#1326..1450#1530..1598#1702..1770#2067..2129#2252..3036#3102..3504#ATGGATAATAATGCTGATGTCTCCACACCAACATTGTTGTCAATATCAGGTGATTTTTTTGTCGATTTATTATTCGGTGATGATATAGAATTTACCATATATAATATATGATTGATAGAGTTTGACCTTTGGCATTCCATTTTATAATATCTGATCGATAGAGTTGCTAATATGCTATGGGACCATGATAGTCAAATAGTGTACATACTGCCACATCACCTATTGACTCGTGATAGAAACTTTACTAATCAAGGCTAAAAAATCACACAACTGTTGAACATGTTATTATAGGAAGAGCTCATATTTAGTGTCAATGCATGCTTAAAAGTAGTTAAATTTTTACCCTGAAATCTGTCTCAAATACAATTATTTCCTGAGTTAGTGTGGTCCTAGGATGGTAGAGTAGAATCTGAAAGTTTGTCATAGATTAATAATAGAATCCAATAGTGCCGCAGTACTCTAGTATTGTATAGTTACATAAAACATTCAATAGAGATTTAACATGAAATTTGGTGAATCCAGTAACTTGTACTGCTAAAATGCCATATATTGATTTTATCTTTCATGTCAGCAATCGAATCCTTTTTAGGCTCAGCTGTAATATGTTACTAACATCTAAAAGTATGTTCTGCCAATTATTTCAATCAACATGTTAATTTCTTTGCATGTGGGCAGCTCTGGTTGGCGATGTTACTAATTTAAGTGCCGAGGAATTGAGAAGAAGGCAGCAACGTGAAATAAACAATTCTTTGAAAGTGGAAGGATGGAATGAATACACATTTCTTGGATGTGCTAATACAGCTGGGTCAGGTAATGCCCCTATTTTTTCACACACGATGTAAATTACAAATTCACTGTTGCTCTATTTTGAAGTTAATTAGCGATTCTTTGTTTCAACAGGAAGTGTAACTCGCCAACCCGTGATCACACCTAGACGCCTCACGCCTCTCATTTAGAATTTACATCCAGTCCAAGTTAATTGCAAATCTTTGTTAATCTTTGATAACTTACAACCCGACACTACTGTTTATATGTTCTATACTTGTCTTTATACATCTGTATGACATGTTAATCGATTGAATGGTTAACAACGTGCTAAATATTTCTCAAACTATTTGACAGTGCTGTCTCTTGTCCAATTAAAACTGCAATGAGAAATTCTGTAAAATTATTAAATCCAAGATATTTTATTTCCAAAAATGTGGCATGAGTTTGGAAAAATGACATTCATTAGTCATTCAATTATTACATCTACCCCTTTGGGTGTGCCTGCACATTGGAGCATAGGAATCAGGACTGTGATCTGATAATTGCAACACTTGCAGCTTGCAAGAAAAGAGTCAAAGCTTCATCACTTGATAATGTAAAAGCACAATGCCATATGATACTTGAAGATAAACGAATAGAGCTGAAGGAGTACTTGAATGATCTGTGTCACGACAAGCACAAGGTATTATGTTTCTATAATTTGCAGTACTATTATTAATTTTGTAACACTATGGTATCTCAGTTACGAATGAACTTTGCAGGTTATTGATAATATCTGTAAGAAATATGAACTAGAAAATATAGAAATCACTAATGCCAAAAAACAAAAGGTAAGCTAAGTTTCTTTTTTCTTTTGAAAAGTATTTAAGCTAGGTATTTGGATTGCTGGTGTTATTCTAATGCTATATTTTTTCTGAATGTTGGAAAATTCAGGCAGAAAAACTCTCTAGGGAAATGAAAAACAAATGTAATAAAAAGATGCCCAAGTCACATGGAGCAAAGGTAAGTTGAACTAGTTTGATTTCTTCATTTGAAACAAATGAATGTTACTTTTTTGTGATGCATGTGCCATTGGAATGCTGCAAAAGTTGTTTGTGTAATAGTTGAATAAAGTAAGCTAAGCATTTCAGCTACTGATAGTTTTCTTTAATGATGCTCATTTCTTTCACTACTATGAAACTGAAAACTGACCATATGCTTGAGTCATGGGGGGTTTTGTACTAATGTTTAATGAAAGTTGTATAAAAATGAAAAATACTAATAGATCCTTGAGTCACGAAGGGCAATATTCTTTTCAGGTGTTGAACACCATGAGGTTCTTCCATACAACTCCTTCTAAGGAGAAATCAAAAACAAAAAAGGTATGGTGATTGAGGGATTTTTAAGATCGTTCATGCTATATTTAGTCTATTTTGGTTTTTGTTGTCTCCTTATCTCAAGGAAATCCAACAAGGGAATATTTTCTTGTTTTTATATTATGCAGTTCAGAGATCCAAAGGATGGTTATCCAGGAAATTCAAAGGATGGAAGTTATCCAGGGAATACAATCACAATGGATATGGATAAAGACAACCTGCCTGCATTTAGGCGTAGTTTTAAAAGGGCAATTAAAAAAGGCCGAGCATGGTGCCAGGCAAACAGCAATTCGGTTGACATATCAGGACTCTTTGGTCCCGGAGCCGAAGTTTATACAACCCCCGCAACCGGAACTTTGCATGTGAAGCTTAGGAACAAAGGGCGTGAACTTACACTCTTCTTCCGTGGTAGAGACTTATACCTGAAAGGGTGGAGAAGTGATAGGTTTGGTCTGTTTGCTGCCCACCCTGATAGGTTTGATAAGAAGGATTGCTTCATACAAGACAAAGCTTGCAAACACCTGAACATCGAGGATAATTATCATCAGCTTGTTCCAGGAGGAAGAATCGGGAAAGTCAGAGTGGGACCCCTTGCAATGCTAGACTATTTTGAAGTCCTTCACAAATGCAATGGAATAGTGACAACAGATGTTCTGGGGGCTGTGGCTGGATTTGCTGTTAACTTCGCAGAACCAATACGCCAGGAAGATGTCTTGGAGGATATCTTAGAGTCGTTTGTTCATTTTGATGTGGCTATGCTGGATAGCAGAAGGGCACTATCCTTGGACGTAAGGAAATACGACCACTACTCAAGGGAGTTTCTAACTGGTGTCGATTGCTTATTGCACGGTAGACCAATGCCAGAGATTTTGAAGCGTGAGGAAGTTACAGTCAAGTCACTCCATGAGTTGTGGTGCAGAATCAAAGTTCCGCTGAGAGACTCTTATAATGATGGTGCATTTTATCATGATGATAAAGTTGGCATACCCGTCTGGTCTCCCCCCCTACCCTGATGGGAATAATTGGGAGGAGGAGGAAGATGAAGGAAGAAGAGGAAGAGGGAGATAAAGAGGAAGAGGCTGAGGAAGAAGAGGAAGAGGAAGAAGAGGAAGAGGCTGAGGAAGATGCAAACCACCGTGATCTAAAATTCACAAGCCAACAGGACTTCTTTTCAGTTGGGATGAAGGCTAATGAAATCAACACCTCTTGTCTCTGTCGTCCTTTCTCTGCAGTTGCCTCAGGTGGGATGAGGCCCCTTGTTGTCCCTCCAAGTCAGGGTGGGGAAGTCCAGAGCCGGTTTCTGAGCAGGAGGCCACAGTGGTTCTCCAGATTCATTAATGGACCAAGGGCTGCGTGTTTTTTGAGGAGGCTACTAAAATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026266