BGIOSGA026275

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Revision as of 06:41, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026275| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026275, complete gene.| tag = OsI_271...")
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Gene Name

BGIOSGA026275

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026275, complete gene.

LocusTag

OsI_27121

Ensembl Transcript ID

BGIOSGA026275-TA

Ensembl Protein ID

BGIOSGA026275-PA

Length

6571

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25231904..25238474

Sequence Coding Region

25231904..25232369,25232418..25233133,25233567..25233986,25235448..25236386,25236794..25237213
,25238355..25238474

Genome Context

<gbrowseImage1> name=IndicaChromosome07:25231904..25238474 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:25231904..25238474 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGATTCCCTCAACTCAGACTCTTCCAGGAAGAAGCTCTATGGGGTTCAGATGCTGCACAGCTTTCTCAAAAAGGAGCAGCTAAGGACTAAAACAATAACAAAGCTCACCAATGCCACGAAGACGGTAGCCTCGTTGTTTGATATGCTGGGCTGGACAAGTGACGGGGATGAAGAAATCAGATTCTTCGCCGCAAAGGTCACTGCCGAGCTTGCTGGTAGCCTCCGAGTTGTTCAAATCCCTGGGGCAACACAGCTTGTAGCCTCACTTCTGGACACCGATCACCAACAGAGAATAAGGGATCATTTTCTGTTAATTGATAGCCAAGTGGGACGAGAAGACTCACCAATTCAGCAAGTTGGCGTGGCCGAACAGGACTCCCCAGTACTTAAGTACTTGAAACAGATGGCAATATATTGTTTGATTCCGGTGGATGAGCCATCTAACACGCATCAACGAAACTCACAGGAGGAGGCATCCACGGACCAAGATTTCCTCCCCATACAAGGACTGCTAATTCTTGAGAGGCTTGCTAACTTTGATCCTGGAAACTGCATGGAAATCAGCAGAACAACAGGCCTCATCTCAAAGATGATAGATTTTATAAGCTACAGAAATCATATGACAAGTACTAGTGAAGCCCACCAAATAATGCTGGCAAGTTTGTCACTTAAGGTGCTGAGAAGACTTGCAAGTACTGAAGGGAAGTTAGGTGTAACTCTGCGACAACAGATTTTGGAACATACCTTCGTATTGAGCAACCTTGCAGAGATCATGGATGACAATGGGAGCAGCCATGAACTGAAGCAGTTGGCTGCAGAAATCCTGAAAAACCTTGCCATGGATAGAAACACTAGTGAGGGCATCGGGCACATCCGAGTGATTATCAGTAGTTTGATGCGTGAATTTCTCAGCCAAGATCCATCCTCAAGTAGAAATTCTAATCACTTGCTACGGAAAAATGCCGGTCAAGCACTGGCAATGCTGGCAATGGAGAGTACAGATAACTGTTTGATTATGTTAATGGAACCAGGGTATGTGTTCATTAGAGAACTTACAACTATGATCCATGATGACAGGTACAAATGTATAGCAGCAAGCCTGCTGTGGAATATGTGCGAGCATGCTCAGCCTGAGCTCAGCAACTCCGACCTGAAGGAACTGTCTTACATCTTGCGAGAGGTGCTGGAAGGAATAATGGATGTGGAAGGGGCAGAACTAGAGGTCCTTATTGGCCTTAGTTCACAAATATGTCAAGTCATTCCTGAAGACTTCACGCGAGAAGTTGAGCATGGCCAAATTAAGGAAAAATTAGTAAAGAGGCTTGTCGATGTGTTTAATGCACATATGAAACCCAGTGCTCATTGTCCTGGCATCAGGAGGGTGATTGTTCAACATGCCATATACTTGATGGAGTTCAATTCTCGCTATGCAAATGATTTCCACAAATGCTGGATGGTGGAAGCACTATCAATGGTGGAACGTACACCCTCGAGGTCTGAAAACTACAGGTTGTTTTCAGGCGACACAGGACTCATGGAGCACAACGCACCACTTTCTGCTCTTGTGGCCAGAGCAAAAGAGCTGATGGGTCGCGAATGGAGATCAAGGGATCATTTTCTGTTCATTGATAGCCAAGTGGGACGAGAAGACTCACCAATTCAGCAAGTTGGCGTGGCCGAACAGGACTCCCCAGTACTTAAGTACTTGAAACAGATGGCAATATATTGTTTGATTCCGGTGGATGAGCCATCCAACATGCATCAACGAAACTCATGTATGCACAGATGGTGGAAGCGGATCACAAAACGCTGGTCACTTCCAGAGGAGGAGCCATCCACGGACCAAGATTTCCTCCCCATACAAGGACTGCTTATTCTTGAGAGGCTTGCTAACTTTGATCCTGGAAACTGCATGGAAATCAGCAGAACAACAGGCCTCATCTCAAAGATGATAGATTTTATTAGTTACAGAAATCATATGACAAGTACTAGTGAAGCCCACCAAATAATGCTGGCAAGCTTGTCACTTAAGGTGCTGAGAAGACTTGCAAGTACTGAAGGGAAGTTAGGTGTAACTCTGCGACAACAGATTTTGGAACATACCTTCGTATTGAGCAACCTTGCAGAGATCATGGATGACAATGGGAGCAGCCATGAACTGAAGCAGTTGGCTGCAGAAATCCTGAAAAACCTTGCCATGGATAGAAACACTAGTGAGGACATCGGGCACATCCGAGTGATCATCAGTAGTTTGATGCATGAATTTCTCAGCCAAGATCCATCCTCAAGTAGAAATTCTAATCACTTGCTACGGAAAAATGCCGGTCAAGCACTGGCAATGCTGGCAATGGAGAGCACAGATAACTGTTTGATTATGTTAATGGAACCAGGGTATGTGTTCATTAGAGAACTTACATCTATGATCCATGATGACAGGTACAAATGTATAGCAGCAAGCCTGCTGTGGAATATGTGCGAGCATGCTCAGCCTGAGCTCAGCAACTCAGACCTGAAGGAACTGTCTTACATCTTGCGAGAGGTGCTGGAAGGAATAATGGATGCGGAAGGGGCAGAACTAGAGGTCCTTATTGGCCTTAGTTCACAAATATGTCAAGTCATTCCTGAAGACTTCACCCGAGAAGTTGAGCATGGTCAAATTAAGGAAACATTAGTAAAGAGGCTTGTCGATGTGCTTAATGCACATATGAAACCCAGTGCTCATTGTCCTGGCATCAGGAGGGTGATTGTTCAACATGCCATATACTTGATGGAGTTCAATTCTCGCTATGCAAATGATTTCCACAAATGCTGGATGGTGGAAGCACTATCAATGGTGGAACGTACACCCTCGAGGTCTGAAAACTACAGGTTGTTTTCAGGCGACACAGGACTCATGGAGCACAACGCACCACTTTCTGCTCTTGTGGCCAGAGCAAAAGAGCTGATGGGTCGCGAATGGATAAATAACTGGCAAGATATTGGAATGCCTAAGAATGGTACAAAACTAAGAGCAAGAACTTTCGGTGCCAATACAACACTGCCAGCCTTTGGTCATGAAAACATTAGAGAATCAACTTAG</cdnaseq>

Protein Sequence

<aaseq>MDSLNSDSSRKKLYGVQMLHSFLKKEQLRTKTITKLTNATKTVASLFDMLGWTSDGDEEIRFFAAKVTAELAGSLRVVQIPGATQLVASLLDTDHQQRIRDHFLLIDSQVGREDSPIQQVGVAEQDSPVLKYLKQMAIYCLIPVDEPSNTHQRNSQEEASTDQDFLPIQGLLILERLANFDPGNCMEISRTTGLISKMIDFISYRNHMTSTSEAHQIMLASLSLKVLRRLASTEGKLGVTLRQQILEHTFVLSNLAEIMDDNGSSHELKQLAAEILKNLAMDRNTSEGIGHIRVIISSLMREFLSQDPSSSRNSNHLLRKNAGQALAMLAMESTDNCLIMLMEPGYVFIRELTTMIHDDRYKCIAASLLWNMCEHAQPELSNSDLKELSYILREVLEGIMDVEGAELEVLIGLSSQICQVIPEDFTREVEHGQIKEKLVKRLVDVFNAHMKPSAHCPGIRRVIVQHAIYLMEFNSRYANDFHKCWMVEALSMVERTPSRSENYRLFSGDTGLMEHNAPLSALVARAKELMGREWRSRDHFLFIDSQVGREDSPIQQVGVAEQDSPVLKYLKQMAIYCLIPVDEPSNMHQRNSCMHRWWKRITKRWSLPEEEPSTDQDFLPIQGLLILERLANFDPGNCMEISRTTGLISKMIDFISYRNHMTSTSEAHQIMLASLSLKVLRRLASTEGKLGVTLRQQILEHTFVLSNLAEIMDDNGSSHELKQLAAEILKNLAMDRNTSEDIGHIRVIISSLMHEFLSQDPSSSRNSNHLLRKNAGQALAMLAMESTDNCLIMLMEPGYVFIRELTSMIHDDRYKCIAASLLWNMCEHAQPELSNSDLKELSYILREVLEGIMDAEGAELEVLIGLSSQICQVIPEDFTREVEHGQIKETLVKRLVDVLNAHMKPSAHCPGIRRVIVQHAIYLMEFNSRYANDFHKCWMVEALSMVERTPSRSENYRLFSGDTGLMEHNAPLSALVARAKELMGREWINNWQDIGMPKNGTKLRARTFGANTTLPAFGHENIREST</aaseq>

Gene Sequence

<dnaseqindica>1..466#515..1230#1664..2083#3545..4483#4891..5310#6452..6571#ATGGATTCCCTCAACTCAGACTCTTCCAGGAAGAAGCTCTATGGGGTTCAGATGCTGCACAGCTTTCTCAAAAAGGAGCAGCTAAGGACTAAAACAATAACAAAGCTCACCAATGCCACGAAGACGGTAGCCTCGTTGTTTGATATGCTGGGCTGGACAAGTGACGGGGATGAAGAAATCAGATTCTTCGCCGCAAAGGTCACTGCCGAGCTTGCTGGTAGCCTCCGAGTTGTTCAAATCCCTGGGGCAACACAGCTTGTAGCCTCACTTCTGGACACCGATCACCAACAGAGAATAAGGGATCATTTTCTGTTAATTGATAGCCAAGTGGGACGAGAAGACTCACCAATTCAGCAAGTTGGCGTGGCCGAACAGGACTCCCCAGTACTTAAGTACTTGAAACAGATGGCAATATATTGTTTGATTCCGGTGGATGAGCCATCTAACACGCATCAACGAAACTCACGTATGTTCAGATGATGGAAGCGGATCACAAAACGCTGGTCAGTTCCAGAGGAGGAGGCATCCACGGACCAAGATTTCCTCCCCATACAAGGACTGCTAATTCTTGAGAGGCTTGCTAACTTTGATCCTGGAAACTGCATGGAAATCAGCAGAACAACAGGCCTCATCTCAAAGATGATAGATTTTATAAGCTACAGAAATCATATGACAAGTACTAGTGAAGCCCACCAAATAATGCTGGCAAGTTTGTCACTTAAGGTGCTGAGAAGACTTGCAAGTACTGAAGGGAAGTTAGGTGTAACTCTGCGACAACAGATTTTGGAACATACCTTCGTATTGAGCAACCTTGCAGAGATCATGGATGACAATGGGAGCAGCCATGAACTGAAGCAGTTGGCTGCAGAAATCCTGAAAAACCTTGCCATGGATAGAAACACTAGTGAGGGCATCGGGCACATCCGAGTGATTATCAGTAGTTTGATGCGTGAATTTCTCAGCCAAGATCCATCCTCAAGTAGAAATTCTAATCACTTGCTACGGAAAAATGCCGGTCAAGCACTGGCAATGCTGGCAATGGAGAGTACAGATAACTGTTTGATTATGTTAATGGAACCAGGGTATGTGTTCATTAGAGAACTTACAACTATGATCCATGATGACAGGTACAAATGTATAGCAGCAAGCCTGCTGTGGAATATGTGCGAGCATGCTCAGCCTGAGCTCAGCAACTCCGACCTGAAGGAACTGTCTTACATCTTGCGAGAGGTGAGCTGCAAATTCTGCTGTCATTTTTTTGATAGAGTAGAGACAGAAAAACTGCTAATTCAAGTATCAAGTGCAATACTGGAGAGATGCATACCATAACTACTATTTTCATGTACTTGCTATCTGTACTTTTTCATAAATTGTTAGGGAGAACCGACCTGCAGTTTGCACATTGTTTTTCAAAGATCGACAAGCATATGCATATGTGCTCTGAATATTGATTGCATTGTAAGCTCATGTCATGAAATTGACTAATTTGAACCCAACAACATGCAAAAATTATTGTACATTGGAAAACTAAGTATACTGTCGGAAACATCCTGGGTGACCAAACTAAATACTAGGTGATTATGTAGCTGAAGTTTGTTGAATAATGTTTTAATTAATCATGGTTTTTTTTGGCTCACATGTCGTCGCTATTTCCGCTATACAGGTGCTGGAAGGAATAATGGATGTGGAAGGGGCAGAACTAGAGGTCCTTATTGGCCTTAGTTCACAAATATGTCAAGTCATTCCTGAAGACTTCACGCGAGAAGTTGAGCATGGCCAAATTAAGGAAAAATTAGTAAAGAGGCTTGTCGATGTGTTTAATGCACATATGAAACCCAGTGCTCATTGTCCTGGCATCAGGAGGGTGATTGTTCAACATGCCATATACTTGATGGAGTTCAATTCTCGCTATGCAAATGATTTCCACAAATGCTGGATGGTGGAAGCACTATCAATGGTGGAACGTACACCCTCGAGGTCTGAAAACTACAGGTTGTTTTCAGGCGACACAGGACTCATGGAGCACAACGCACCACTTTCTGCTCTTGTGGCCAGAGCAAAAGAGCTGATGGGTCGCGAATGGGTACGGGGCATCAGCAGTGTCACCTAACAAATATGTTGGTTGTACTAAGAGAATGAAAGTCTGACTCCCAACAAACAGGCTCAATTTCCTCACAAGAATGATATGTGTAATACAGTTCAGCTATCACAATGTGCACAGTTCGAATATTGTAATAGAGGAAGGTAAAGAACTGAGCCTCTCGGGGGCCAAAATGTAGCAGCTCTATCTTTTGGGTGATACAGTGACCAAGGAATTTTAGAACGCACGTTTTCTCCTCCGATTTGGTAGCAATAATACAGTTGTTTTTCCCCAGCCATGAAGGTGAAGCATTTTTTTGTTAACTACTCCTATATGTTAACATTGCATTTCCCGATGATAAATAGCAACAGTGTGGGTTAGGCATTTTATCAAACAGCTGATGTGCAGCCCAGCCCCGGCGGGTAGATCTTCGTCGAGCGCATATGCAGGCAGCCCACGTCCAGAAGAAATAGATGGGAGGAAGCAACCGCGGAGGAGGGAAGGAGCGGCGCACCTTTCACTGTCGGACGGCCATGGATGGGAGCGGACTCATCGGCGTCGGCGTCGTGGCGCGAGCTGCTCGTCGCCGGTGCGCGCCGCGGCTGCCGCCTCTCTCTCTCTCTCTCTCTCTCGCTCTCTCTGGGGGATATCGACCATGGGAGAAGGGAGGAAAAGGGACAACAGCTTAGGCGGCCCATCAGGCTCAAAAATCATACCGTGTTGGCCCATCTCGCGCTCTAGAAGTCCAATGTGTTACTCCGAGAAACAAAGCCCAGTATATTTATATATGGAATAAGTTCACTTTGAGTCCCTTAACTACTCGCCCTGAGACTGTGGAAAAAGTACACACAAGGTCCCTCAACTTATCATCTAATTATAAAATCGTCCTCCAACCACAAAACCAGATATAACACGTCCCTCAACTTATGAAAACCGTTCACTTTAGGTCTTTTGGTGGTTTTAATCCCGGTTTTATCCTACGTGGTGGCTGAGTCAGCGTGAAACCCACGTGGGCCCACATGTCAGGATGCCACGTCATATCTTCTTTCTTCCCTTTTCTCTTGTATTCTTCAACGGGTAGGCGACGACGCGACGGGCCGAGACGGGCGCGCGGGCGAAGCAGGGGCGGCGGCCGAAGCGGAGCTGGGGGCGGGCGCCGCCGGAGTTGGGCGGCGACGGGGCGCAAGTAGCAGCCGCCGCCGTGCTCACCCGCCGCCACCGCGCTCGCCTGCCACCGCTGCGCTCGCCTGCCACACCTGCCTGCTTCGCTCGCCGCCTTGCTCGCCCGATCCGCCGCCTGTCACGCTCGTCAACGGCGCCGAGCGGATCTGGAGGAAAAGGGAGGGGAGAGCCAAGTGTGCGCGCGCGTAGCCGGCAGGAATAGCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCACTTTTGGACACTGATCACCAACAGAGATCAAGGGATCATTTTCTGTTCATTGATAGCCAAGTGGGACGAGAAGACTCACCAATTCAGCAAGTTGGCGTGGCCGAACAGGACTCCCCAGTACTTAAGTACTTGAAACAGATGGCAATATATTGTTTGATTCCGGTGGATGAGCCATCCAACATGCATCAACGAAACTCATGTATGCACAGATGGTGGAAGCGGATCACAAAACGCTGGTCACTTCCAGAGGAGGAGCCATCCACGGACCAAGATTTCCTCCCCATACAAGGACTGCTTATTCTTGAGAGGCTTGCTAACTTTGATCCTGGAAACTGCATGGAAATCAGCAGAACAACAGGCCTCATCTCAAAGATGATAGATTTTATTAGTTACAGAAATCATATGACAAGTACTAGTGAAGCCCACCAAATAATGCTGGCAAGCTTGTCACTTAAGGTGCTGAGAAGACTTGCAAGTACTGAAGGGAAGTTAGGTGTAACTCTGCGACAACAGATTTTGGAACATACCTTCGTATTGAGCAACCTTGCAGAGATCATGGATGACAATGGGAGCAGCCATGAACTGAAGCAGTTGGCTGCAGAAATCCTGAAAAACCTTGCCATGGATAGAAACACTAGTGAGGACATCGGGCACATCCGAGTGATCATCAGTAGTTTGATGCATGAATTTCTCAGCCAAGATCCATCCTCAAGTAGAAATTCTAATCACTTGCTACGGAAAAATGCCGGTCAAGCACTGGCAATGCTGGCAATGGAGAGCACAGATAACTGTTTGATTATGTTAATGGAACCAGGGTATGTGTTCATTAGAGAACTTACATCTATGATCCATGATGACAGGTACAAATGTATAGCAGCAAGCCTGCTGTGGAATATGTGCGAGCATGCTCAGCCTGAGCTCAGCAACTCAGACCTGAAGGAACTGTCTTACATCTTGCGAGAGGTGAGCTGCAAATTCTTCTGTCATTTTTTTGATAGAGTAGAGACAGAAAAACTGCTAATTCAAGTATCAAGTGCAATACTGGAGAGATGCATACCATAACTACTATTCATGTACTTGCTACCGGTACTTTTCATAAATTGTTAGGGAGAACCGACCTGCAGTTTGCACATTATTTTTCAAAGATTGAAAAGCATACGCATATGTGCTCTTAATATTGATAGCATTGTAAGCTCATGTCATGAAATTGACTAATTTGAACCCAACAAAGAAAACTAAGTATACTGTCGGAAACATCCTGGGTGACCAAACTAAATACTAGGTGATTATGTAGCTGAAGTTTGTTGAATAATGTTTTAATTAATCATGGTTTTTTTGGCTCACATGTCGTCGCTATTTCCGCTATACAGGTGCTGGAAGGAATAATGGATGCGGAAGGGGCAGAACTAGAGGTCCTTATTGGCCTTAGTTCACAAATATGTCAAGTCATTCCTGAAGACTTCACCCGAGAAGTTGAGCATGGTCAAATTAAGGAAACATTAGTAAAGAGGCTTGTCGATGTGCTTAATGCACATATGAAACCCAGTGCTCATTGTCCTGGCATCAGGAGGGTGATTGTTCAACATGCCATATACTTGATGGAGTTCAATTCTCGCTATGCAAATGATTTCCACAAATGCTGGATGGTGGAAGCACTATCAATGGTGGAACGTACACCCTCGAGGTCTGAAAACTACAGGTTGTTTTCAGGCGACACAGGACTCATGGAGCACAACGCACCACTTTCTGCTCTTGTGGCCAGAGCAAAAGAGCTGATGGGTCGCGAATGGGTACGGGGCATCAGCAGTGTCACCTAACAAATATGTTGGGGGTACTAAGAGAATGAAAGTCTGACTCCCAACAAACAGGCTCAATTTCCTCACGAGAATAATATGTATAATACAGTTAAGCTATCACAATGTGCACAGTTCGAACATTGTAATAGAGGAAGGTAGAACTGAGCCAGGCCAAAATGTAGCAGCTCTATCTTTTGGGTGATACAGTGATCAATGAATTTTAGAACGCACGTTTTCTCCTCCGTTTTGGTAGCAATAATACAGTTGTTTTTCCCCAGCCATTCAGCTTGAGAGCCATGAAGGTGAAGCATTTTTGTTAACTACTCCTATATGTTAACATTTGCATTTCCCGACGATAAATAGCAACAGTGTGGGTTAGGCATTTAATCAAACAGCTGTTGTGCAGCCCAGCCCCGGCGGGTAGATCTTCATCGAGCGCATATGCAGGCAGCCCACGTCCAGATGAAATAGATGGGAGGAAGCAACCACGGAGGAGGGAAGGAGCGGCGTACCTTCCACTGTAGGACAGCCATGGAAGGGAGCTGACTCATCGGCGTCGGCGTCGGCGTCGTGGCGCGAGCTGCTCGTCGCCGGTGCGCGCCGCGTCTGCCGCCTCTCCCTCTCTCTCGCTGTCTCGGGGAGATCGACCATGGGAGAAGGGAGGAAAAGGGACAACAGCTTACGCGGCCCCTCAGGCCCAAAAATTATACCGTGTCGGCCCATCTCGCGCTCTAGAAGTCCAGTGTGTTCTCCGAGAAACGAAGCCCAGTATGTTTATATACTCCCTCCGTTTCGAAATATTGACACCGTTGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGCTTTTATAGCCTGAGGGTGTGTTTAGTTCAGCGCAAAGTTTGGATTTTGGTTGAAATTGGAGATGATGTGACTGAAAAGTTGTGTGTGTATGACAGGTTGATGTGATGGAAAAGGACTGAAGTTTGGATCCAAACTTTGGATCTAAACACAGCCTAAATGTGAAACTAATTCTGTGAGTAGATGAGGTTCTGTGATAATTTTCTTGAGCATAAGTGCACGTTTTGATGTTCTCTATCTGCATTTTCTTGTATGCTTTCCCCTTTTGTGCAGATAAATAACTGGCAAGATATTGGAATGCCTAAGAATGGTACAAAACTAAGAGCAAGAACTTTCGGTGCCAATACAACACTGCCAGCCTTTGGTCATGAAAACATTAGAGAATCAACTTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026275