BGIOSGA026319

From RiceWiki
Revision as of 06:42, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026319| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026319, complete gene.| tag = OsI_271...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA026319

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026319, complete gene.

LocusTag

OsI_27195

Ensembl Transcript ID

BGIOSGA026319-TA

Ensembl Protein ID

BGIOSGA026319-PA

Length

3845

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25817751..25821595

Sequence Coding Region

25817751..25817808,25817895..25818024,25818143..25818212,25818549..25818611,25819153..25819227
,25819447..25819566,25819919..25819960,25820062..25820136,25820320..25820466
,25820576..25820713,25820859..25820973,25821069..25821157,25821473..25821595

Genome Context

<gbrowseImage1> name=IndicaChromosome07:25817751..25821595 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:25817751..25821595 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGGGTGGAAGGCGCCCACGAGGATCCAGGCGGAGGCCATCCCCTTCGCCCTCCAAGGGAGGGACGTGATCGGCGTGGGGCAGACGGGGTCGGGGAAGACGGCGGCGTTCGCGCTGCCGATCATCCAGGCGCTGCTCGAGCACGAGCACCGCCCGCGCTTCTTGGCCTGCGTGCTTGCGCCCACGAGGGAGCTGGCGATTCAGATTGCGAAGCAGTTTGAGGCGCTCGGATCAGCGATCAGCTTGCAATGTTCAGTGCTGATTGGTGGAATTCCTCGGACAAGCCAAACCATATCCCTTGCAAAACGTCCACATGTTGTGGTTGGAACTCCTGGGCGCCTTTTGGACCATTTGACCAATACAAAAGGTTTCAGTTTTAATAAATTGAAGTACTTGGTACTGGATGAAGCTGATGATTTACTTAAAGTGGACTTTCAGAAAGCCGTCGATGATATCCTTAATGTTATTCCTAAAGAACGGAGAACTTTCCTCTTTTCAGCCACGATGACTGAAAAGGTGAAAAAACTGCGACGTGCTTGCCTAAAGAATCCTGTTAAGGTTGAAGTAGCCTCCAAATATTCCTTGGTGGACACACTTAGACAGGACTTATATGTTGTTCCTGCAAAGTACAAGGATTGTTATCTTATTCATGTTCTGAACAAGATGCCAGGGAGCATGATCATGGTCTTTGTCCGGACCTGCGAGTCAACAAGGCTCCTTGCTCTTATGCTCAGAAACCTTCGATTTAAAGCTATTTCTATCAGCGGCCAAATGAGTCAGGATAAGAGACTAGGTGCTTTAAACAGGTTTAGGACCAGAGATTGCAATATCCTTGTTTGCACGGATGTAGCAAGCCGTGGTCTCGATATTCAAGGAGTTGATGTGGTCATCAATTACGATTTCCCACTGAACTCTAAGGATTACATTCATCGGGTGGGCAGGACTGCACGTGCAGGGCAATCAGGATATGCTGTGTCTTTGGTGAATCAATTTGAGGGCGAATTTTTCAAGCTAACCGAGCAGTTCCTTGGGGGTGAAGAAATCCCGGCTCGCAAGGTTGATGCAGATGAAATAATGATACTTCATGAGCGCATATACGACTCAAAGAGAATCGCATTGAAGACAATGAACGAGAGTGGTTACCACAAGAGGATGCGTAGAAGGATGGAAGATGATGAGGAAGAGGTGGAGGAGGCTCCTGTTTCCAGTAGATCAAGGTCCTTGAAGAAATCAAGAAGACGATGA</cdnaseq>

Protein Sequence

<aaseq>MGWKAPTRIQAEAIPFALQGRDVIGVGQTGSGKTAAFALPIIQALLEHEHRPRFLACVLAPTRELAIQIAKQFEALGSAISLQCSVLIGGIPRTSQTISLAKRPHVVVGTPGRLLDHLTNTKGFSFNKLKYLVLDEADDLLKVDFQKAVDDILNVIPKERRTFLFSATMTEKVKKLRRACLKNPVKVEVASKYSLVDTLRQDLYVVPAKYKDCYLIHVLNKMPGSMIMVFVRTCESTRLLALMLRNLRFKAISISGQMSQDKRLGALNRFRTRDCNILVCTDVASRGLDIQGVDVVINYDFPLNSKDYIHRVGRTARAGQSGYAVSLVNQFEGEFFKLTEQFLGGEEIPARKVDADEIMILHERIYDSKRIALKTMNESGYHKRMRRRMEDDEEEVEEAPVSSRSRSLKKSRRR</aaseq>

Gene Sequence

<dnaseqindica>1..58#145..274#393..462#799..861#1403..1477#1697..1816#2169..2210#2312..2386#2570..2716#2826..2963#3109..3223#3319..3407#3723..3845#ATGGGGTGGAAGGCGCCCACGAGGATCCAGGCGGAGGCCATCCCCTTCGCCCTCCAAGGTTTGCAGCCAATTGGGCAATGGAGATCGACGGTGAGTACTAGTTTTCTGGCTAAATCCTTACTGGTTGATTGATTGGATGTGTAGGGAGGGACGTGATCGGCGTGGGGCAGACGGGGTCGGGGAAGACGGCGGCGTTCGCGCTGCCGATCATCCAGGCGCTGCTCGAGCACGAGCACCGCCCGCGCTTCTTGGCCTGCGTGCTTGCGCCCACGAGGTTTGCTAAATTTTTCTATCTCTGCTTCTTTTTTTTTTCCCTTTCCTGGGACGATTTGATTGCTCTGTTATTGTGAATGTGTGTGTGATTCTGGACTGCGGCTTTGGTGGTTCTTCAGGGAGCTGGCGATTCAGATTGCGAAGCAGTTTGAGGCGCTCGGATCAGCGATCAGCTTGCAATGTTCAGTGGTATATTGCCGTATCGTCTAATCACTACTAATTTTTTAGTTCCCGTAGCTAACCCAGCATTGTAAATTTATGGATGCTCTTGCTTCTCTGACTTACTAGTGTTTTTTTGACAACGTGTTTAAATGTTGTGGAAAAAAAACACTTAGCGCAGCAGCAGGTTGTCTTGCTCAGTAAAAGTTCAAAGAATTTCAGTTATTAGATGCATTATATGATGTTCCTTTGGTGATCAACAGACATGCTAGTGCTGATCAAAGAGAGTCTCTTACTCTCTTCAAAGAGAGTATCTATTACTTCTTGCTATAATCACTTTTCTATTGATGATTTTTCTTTCCTCAGCTGATTGGTGGAATTCCTCGGACAAGCCAAACCATATCCCTTGCAAAACGTCCACATGTTGTGGTGAGTATAGTTTAACAAATTTACCAATCACTTCAGGTTTGGTGGCGGTCTTCTAGGGCCTGCCTGCCTGAGCATCTTCGCGAGGGCTTCGACTCTTGGCAGCTCTGGAAGGAGCGGAACTCGAGGGCGTTCGATTACTCTCTCTCGTCGGTTTCAGTGGTTCTGTAGCCCATTTTGCTGGAAGGCTGTATGTAGTCAGCCGCTAGCGCGGCGCTTTTTGGGGGCCTGTTGGGAGTGTAGTGGGGACTCCGCCACCACCCTCCTTCAATATAGGAGTAACGTTTCATTTTAGTTTTAGTTTGTTTCCTTTTTTTTTCCCCTTGGTCCCCCAGCAATGGCCTTCTGGCTGGTTGCGATGTGTAAATGGAACTCTGCTTTCTTCTAATATATTAACGTCAATCCTTTTACACGTTCGCGAAAAAAAAAACAATCACTTGGTACTGGAACTTTAGCACAGTTATTATCCCTCTTAGTGAAAACTCGTAAATCTGATATCATGTAATATTTCTTCATCTCAACTAAGCTTGATTATGTTTCCTAGGTTGGAACTCCTGGGCGCCTTTTGGACCATTTGACCAATACAAAAGGTTTCAGTTTTAATAAATTGAAGTACTTGGTAAGTATTTTTCAGAATTTGGTCTTTTCTGTTGGATATTTATAGTTAGGAATATTTTGTTGAGACGGTGCAGTAGTATTCCTGGTATTAATATTTGTAATCGAGGATTTGGATGTGTCCAATCCTTGTACTTTATATGTAACACATATGCCTGTTGGGCCATCGCAATATAACCCACTATTTTTTATCACCTTTATGCATATCTTTTGGTTTTGCTAGGTACTGGATGAAGCTGATGATTTACTTAAAGTGGACTTTCAGAAAGCCGTCGATGATATCCTTAATGTTATTCCTAAAGAACGGAGAACTTTCCTCTTTTCAGCCACGATGACTGAAAAGGTTGGCAGATAGGAGCTTTATTTATTTATGTTATTAGCGGAGCTCTGCTTTTCTGTTAAGACCATATAAAAAAGTTATGGACGTTTGTGATGGAAATACTGATTTTATGCTTCCTCTGAATGTGAACCAAAAGATTAAACATTGCTGGTTGTCCATCATTTATCAGAATGACGTGGGTCACTGCTTGGAGTGATTATTAATCACACGTACTTAGACATTCCTGAGATAGTGAGAATACCATATTGGATTGATTTTGTGCTCTTATAAATTTTCTAGGACTACTTAAATGTCATATCTATATAACCCTTTTAGCTACTACTGGTCGTGTGACAAATTTTTTTCGGTCCTGCAGGTGAAAAAACTGCGACGTGCTTGCCTAAAGAATCCTGTTAAGGTGGTTCCTTCTTTGTCTCAAGAGCATTTATTTGAAATAATATTAAAGGAAAGTGCTATCTTATTATTTATTAATGGGCCTTGAGCTTTTTTTTTAATCAGGTTGAAGTAGCCTCCAAATATTCCTTGGTGGACACACTTAGACAGGACTTATATGTTGTTCCTGCAAAGTACAAGGTCACTTGCACCTCTTATTTGATCTATACTGTGCCTACATGTTTGATGTTGCTATTACATGCTGCATACATGATTTTACAGTCCATGCAACTTTAATAAATAATGTCACAAATTATGTTTCATTGTTCAAATCATTTTATCTTTCATTGCTGTTTCACCTTTTCTGTTGTATGCAAATTTCAGGATTGTTATCTTATTCATGTTCTGAACAAGATGCCAGGGAGCATGATCATGGTCTTTGTCCGGACCTGCGAGTCAACAAGGCTCCTTGCTCTTATGCTCAGAAACCTTCGATTTAAAGCTATTTCTATCAGCGGCCAAATGAGTCAGGTTTACTCACTCAGATATTCAAAAGTGCTTGATTCTTTCATTTTAGTTGGTTTAGGAGGCAGAAATGATCCCTTAAATTTATTTTTCTAAGTCATAACTTTGTGGCCAGGATAAGAGACTAGGTGCTTTAAACAGGTTTAGGACCAGAGATTGCAATATCCTTGTTTGCACGGATGTAGCAAGCCGTGGTCTCGATATTCAAGGAGTTGATGTGGTCATCAATTACGATTTCCCACTGAACTCTAAGGTTCCAACTTTATAATTTCAGTGTTCTTACCTGATCATTGCAAAACGCGAATATTTTTCCCATATGCTGCACCGAGATGATGCATTTAGGATTTCCTTTTTCATACTTGTTGTGGTTTAAATCCTAATGCTGCACCAAAATGCAGGATTACATTCATCGGGTGGGCAGGACTGCACGTGCAGGGCAATCAGGATATGCTGTGTCTTTGGTGAATCAATTTGAGGGCGAATTTTTCAAGCTAACCGAGCAGTTCCTTGGGGGTAACAATTTTTCTTTTTGAGTACTTTTACTGCATACTGCCAGTGCCAGCACGTAAATAAGGCCATTTCGAAACATACTTTCTGTATTTGGGCAGGTGAAGAAATCCCGGCTCGCAAGGTTGATGCAGATGAAATAATGATACTTCATGAGCGCATATACGACTCAAAGAGAATCGCATTGAAGGTACATACTTCCTCCGTTTTATAATATAAGACTTTCTAGCATTGCTCATATTATATATGAATATGGACAATGCTAGAAAGTCTTATATTATGAGACGGAGGAAGTACTAATTTTCTACCTCACCCCAAATTGTAGCTGCTACTTTGTTAGGCTTCTGATCACTTTTGGTGATATAAAATTCTGTACGGATGTTCACCGTTCAACAGTATCAGTTTCCTTGTTTTAATCGACAACTCTCATTTGTTTATATTATGTTTTTCTTCCCTGGATTGATATTAACTGGAGTATCATTTTTTGAATCTTTGATTCTGTTAGACAATGAACGAGAGTGGTTACCACAAGAGGATGCGTAGAAGGATGGAAGATGATGAGGAAGAGGTGGAGGAGGCTCCTGTTTCCAGTAGATCAAGGTCCTTGAAGAAATCAAGAAGACGATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026319