BGIOSGA026328

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Revision as of 06:43, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026328| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026328, complete gene.| tag = P0453E0...")
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Gene Name

BGIOSGA026328

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026328, complete gene.

LocusTag

P0453E03.120

Ensembl Transcript ID

BGIOSGA026328-TA

Ensembl Protein ID

BGIOSGA026328-PA

Length

6501

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:25956897..25963397

Sequence Coding Region

25956897..25957241,25957404..25957521,25957855..25957907,25958010..25958137,25958256..25958385
,25958649..25958845,25958931..25959009,25959156..25959194,25959404..25959523
,25959619..25959720,25959856..25959939,25960034..25960276,25960358..25960483
,25960567..25960641,25960736..25960807,25961009..25961128,25961277..25961374
,25961845..25962004,25962084..25962182,25962324..25962521,25962606..25962699
,25963237..25963397

Genome Context

<gbrowseImage1> name=IndicaChromosome07:25956897..25963397 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:25956897..25963397 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGAATTTGTCCGGGAAGAAATCTCTGAATACAGTGACCTTGGTCTTCAAATTACCCTACTACACACAATGGGGGCAGAGTCTTCTCATCGCCGGCTCAGAGCCAGCACTTGGATCTTGGAATGTTAAGCAAGGATTGTCTCTCAGTCCAGTTCATCAGGGAAATGAGCTAATCTGGTCCGGCAGAGTTTCCGTCGCTACTGGTTTTACCTGCCAGTACAATTACTATGTAGTGGACGACAACAAGAATGTTTTGAGATCGGAGTCCGGGGAGAAAAGGAAATTAGTACTTCCAGAGGGTGTTCAGGATGGAGATGTAGTTGAGATACGCGACTGGTGGCAGGATGCTTCTGAAGCTCTTTTCCTTCGAAGTGCATTCAAGAATGTCATTTTCAATGGGTCTGAAAATGCTAAAAGAGAATTGAAGACTACATCCCTCAACAAAAGTTTGGAGCCTGAAGATATTGTTGTTCAGTTTATTGTTAGCTGTCCCCGACTTGGAGCTGGCTCTACTGTCGTGGTCACAGGAAGTAATCCTCAATTAGGAAGGTGGCAAACACAAGATGGCCTCAAGCTTAATTATGTCGGAGATTCCATCTGGAAAGCAAACTGTCTGTTGCGAAAGTCTGAGTTCCCAATAAAATATAAATACTGTAAAATTAGTGAAGCAGGAGTCTCTTCATTGGAGTTCGGTCCGAACAGGGAGGCTGATGTGGATCTATCATCACCCAAGCCATCCAGATACGTCCTCTTGTCTGATGGTGCCCTTCGGGAATCACCATGGAGGGGTGCAGGTGTTGCTGTACCTATATTCTCGATCAGGTCAAATGAGGACCTTGGTGTTGGAGAATTCCTTGATCTTAAACTTCTTGTTGACTGGGCAGTCAACTCAGGCTTTCATCTTGTTCAGCTTCTTCCTATCAATGATACTTCAGTTCACGGGATGTGGTGGGATTCATACCCATACAGCTCGCTCTCTGTGTTTGCATTGCACCCCTTGTACCTGAGAGTACAAGCACTTTCAGATGCAATTCCAGGGGATATTAAGGACGAGATTTCACAGGCAAAGAAGCAGTTGGACAAAAAGGATGTTGACTATGAGGCATCACTGGCCTCAAAACTCTCGATAGCAAGAAAAATATTCAAATTAGAGAAAGACAAAGTACTAAATTCCAGTTCGTTCAAGCAGTTTTTATCTGAAAACGAGGAGTGGTTGAAACCATATGCTGCATTTTGTTTTCTGCGGGACTTCTTTGAGACATCAGATCACAGCCAATGGGGCCGTTTTTCTCAGTTTTCCAAGGAGAAGCTAGATAAGCTTGTTTCTGAAGGTACCTTGCACCATGACGTTATATGTTTCCATTACTACATCCAGTACCATCTATATATGCAATTATCAGAGGCAGCTGCCTATGCAAGGAAGAAAAAGGTTATTCTGAAAGGAGATTTACCTATTGGTGTTGATAGGAATAGTGTGGATACTTGGGTATACCCCACTTTATTTCGCATGAATACAGCTACTGGTGCACCTCCAGATTATTTCGACAAAAATGGACAAAATTGGGGTTTTCCTACATATAACTGGGAGGAAATGTCAAAGGATAATTATGGGTGGTGGCGAGCTCGTCTGACACAGATGGCAAAATACTTCACTGCATATAGGATAGACCATATCTTGGGTTTCTTTAGGATATGGGAGCTTCCAGATCATGCAGCCACAGGTCTAGTTGGGAAATTTAGGCCTTCAATTGCTCTCAGTCAGGAGGAGCTTCTTAGTGAAGGCCTATGGGATTTCGATAGAATGAGCCGCCCTTATATTCTTCAGGAAACACTGGAGGAGAAGTTTGGGTCCTTTTGGACAGTAATTGCAGCTAACTTTCTAAATGAGTACAAGAAACAACATTACGAGTTCAAAGAGGACTGCAATACAGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGGCTGGAGAAAGAAGACAGCATTCGGCGTGGTTTGTTTGATCTACTACAGAATATAGTCCTTATTAGAGATCCAGAGGACAGCACAAAATTTTATCCCCGCTTCAACCAGGAGGATACTTCAAGTTTTAACGATCTAGATGAACATAGCAAAAATATCCTCAGAAGATTGTACTATGACTATTATTTTGCTCGCCAAGAGAATCTCTGGCGTCAAAATGCGCTCAAGACTCTGCCTGTGCTTTTGAACTCATCGGATATGTTGGCATGTGGGGAAGATCTTGGCCTTATCCCTGCCTGTGTTCACCCTGTTATGCAAGAACTTGGATTGATTGGATTGCGTATCCAGAGAATGCCCAGTGAACCAAACTTGGAATTTGGTATTCCATCTCAGTATAGCTACATGACGGTTTGTGCTCCGTCATGTCATGATTGCTCCACATTACGTGCTTGGTGGGAAGAAGATGGAGGAAGAAGAAGCCGTTTCTACCAGACTGTAATTGGTAGTGATGACGAGCCGCCATCTCGCTGCACCCCAGAAGTAGCGAACTTTATTGTTAAGCAGCATTTTGATGCTCCATCAATGTGGGCAATCTTCCCACTACAGGACCTGCTTGCACTTAAAGACAAGTACACCACAAGACCAGCAAAAGAGGAAACAATCAATGACCCAACTAACCCGAAGCATTATTGGAGATTCCGGCTACATGTGACATTGGATTCGCTGTTGGACGATAAGGACATCCAAGCAACCATCAAGGAACTTGTCACAAGTAGTGGGAGGTCATTTCCTGGTAAGGTGGATGGCGCCGAAGAAAGCGGAGAGAAGCTAGCTAAAGTCCAGTTGAATGGTAAACCATAG</cdnaseq>

Protein Sequence

<aaseq>MANLSGKKSLNTVTLVFKLPYYTQWGQSLLIAGSEPALGSWNVKQGLSLSPVHQGNELIWSGRVSVATGFTCQYNYYVVDDNKNVLRSESGEKRKLVLPEGVQDGDVVEIRDWWQDASEALFLRSAFKNVIFNGSENAKRELKTTSLNKSLEPEDIVVQFIVSCPRLGAGSTVVVTGSNPQLGRWQTQDGLKLNYVGDSIWKANCLLRKSEFPIKYKYCKISEAGVSSLEFGPNREADVDLSSPKPSRYVLLSDGALRESPWRGAGVAVPIFSIRSNEDLGVGEFLDLKLLVDWAVNSGFHLVQLLPINDTSVHGMWWDSYPYSSLSVFALHPLYLRVQALSDAIPGDIKDEISQAKKQLDKKDVDYEASLASKLSIARKIFKLEKDKVLNSSSFKQFLSENEEWLKPYAAFCFLRDFFETSDHSQWGRFSQFSKEKLDKLVSEGTLHHDVICFHYYIQYHLYMQLSEAAAYARKKKVILKGDLPIGVDRNSVDTWVYPTLFRMNTATGAPPDYFDKNGQNWGFPTYNWEEMSKDNYGWWRARLTQMAKYFTAYRIDHILGFFRIWELPDHAATGLVGKFRPSIALSQEELLSEGLWDFDRMSRPYILQETLEEKFGSFWTVIAANFLNEYKKQHYEFKEDCNTEKKIIAKLKNSSEKSLWLEKEDSIRRGLFDLLQNIVLIRDPEDSTKFYPRFNQEDTSSFNDLDEHSKNILRRLYYDYYFARQENLWRQNALKTLPVLLNSSDMLACGEDLGLIPACVHPVMQELGLIGLRIQRMPSEPNLEFGIPSQYSYMTVCAPSCHDCSTLRAWWEEDGGRRSRFYQTVIGSDDEPPSRCTPEVANFIVKQHFDAPSMWAIFPLQDLLALKDKYTTRPAKEETINDPTNPKHYWRFRLHVTLDSLLDDKDIQATIKELVTSSGRSFPGKVDGAEESGEKLAKVQLNGKP</aaseq>

Gene Sequence

<dnaseqindica>1..345#508..625#959..1011#1114..1241#1360..1489#1753..1949#2035..2113#2260..2298#2508..2627#2723..2824#2960..3043#3138..3380#3462..3587#3671..3745#3840..3911#4113..4232#4381..4478#4949..5108#5188..5286#5428..5625#5710..5803#6341..6501#ATGGCGAATTTGTCCGGGAAGAAATCTCTGAATACAGTGACCTTGGTCTTCAAATTACCCTACTACACACAATGGGGGCAGAGTCTTCTCATCGCCGGCTCAGAGCCAGCACTTGGATCTTGGAATGTTAAGCAAGGATTGTCTCTCAGTCCAGTTCATCAGGGAAATGAGCTAATCTGGTCCGGCAGAGTTTCCGTCGCTACTGGTTTTACCTGCCAGTACAATTACTATGTAGTGGACGACAACAAGAATGTTTTGAGATCGGAGTCCGGGGAGAAAAGGAAATTAGTACTTCCAGAGGGTGTTCAGGATGGAGATGTAGTTGAGATACGCGACTGGTGGCAGGTACTTAGTAAAAGTTTCATGTACTAAATTAATTTCTCTTCATGCTTGTTGACCTATAAAAACATTAGTAGCAGTAGCAGCACTACTTGCCATCATACTAGTCATACAGGCTTTCATGTTCTGTACCATGGCGGTTTATGGATACTCCTGATTTGAATTTAGGATGCTTCTGAAGCTCTTTTCCTTCGAAGTGCATTCAAGAATGTCATTTTCAATGGGTCTGAAAATGCTAAAAGAGAATTGAAGACTACATCCCTCAACAAAAGTTTGGAGCCTGAAGGTAAGAAGAGTCTAGAACTGATGGAATAATCAACAGGAAGTCAAGTGGTCAATCTACATATATCACATATTCCTTTTGAATATATTTTATTCATAAAGAATCAATGTAGCATCATGTCTTACCTATCGAGCAAAGCATGTTGATTGTTGTTTAATTTTTTAGATAATGGGCAACGTCCGGCCTCTGCATTCTAAGGTGAATGCACACGGCCAAGATTGTCGTTTAATATAGTCTCATATCTTCCATGGTAGTGCATATTACTTAGATTTACATACCAAGCCAAGCATGGATAACATTTTTTTAATTCATTGTCCCTAAATTTTTCCTCAACAGATATTGTTGTTCAGTTTATTGTTAGCTGTCCCCGACTTGGAGCTGGCTCTACTGTAAGTGTTATTCGTTCAATTTATATTTGATTATCTTTATCCCATTATAGCTAATAATTATACTTCTGGTACTCCCTAACTATTGCTCATGTCAAACTTTAGGTCGTGGTCACAGGAAGTAATCCTCAATTAGGAAGGTGGCAAACACAAGATGGCCTCAAGCTTAATTATGTCGGAGATTCCATCTGGAAAGCAAACTGTCTGTTGCGAAAGTCTGAGTTCCCAATAAAATATCCTTGTGCCAATGAGTACTCACTTACTTCCAATTTGCATGTAGAAATCACCATTTAGATATTATTTCTGAAGAAATCACCATTCAGCTATTGACCATTCTTAACAATATCCCACATATAAATACTGTAAAATTAGTGAAGCAGGAGTCTCTTCATTGGAGTTCGGTCCGAACAGGGAGGCTGATGTGGATCTATCATCACCCAAGCCATCCAGATACGTCCTCTTGTCTGATGGTGCCCTTCGGGTAATGTATGCAGCCATAATTAGTACGCTGAAAATATGCTTATAATTGCATGTTGTTTTGGCTCCCATTACCTTTGCTATGATGCATTAATCAATCCGTCATATTCAGTTTGCTCAATCCATGATCTAAAAAGTAATACCATCAAATGCTTGGTAGAAAGAACAACTGTATCTCATGATTTAGCAAGATCTGAGGATACAGTGCGCGCCCACTTATCATAGAGAACTGATGAGTAGCACTAATTCAGCACTTGGTTTTACCAGGAATCACCATGGAGGGGTGCAGGTGTTGCTGTACCTATATTCTCGATCAGGTCAAATGAGGACCTTGGTGTTGGAGAATTCCTTGATCTTAAACTTCTTGTTGACTGGGCAGTCAACTCAGGCTTTCATCTTGTTCAGCTTCTTCCTATCAATGATACTTCAGTTCACGGGATGTGGTGGGATTCATACCCATACAGGTATTGGGCTGATGCAGTGTGCTTTTGCTTTGAGTAAGAAGAATAGTATCTGAACAGAAATAATGCCCTACATGTTGGTTTACAGCTCGCTCTCTGTGTTTGCATTGCACCCCTTGTACCTGAGAGTACAAGCACTTTCAGATGCAATTCCAGGGGATATTAAGGTGTACCTTTGTTATACCTTCATATGAACTCATTGTACCCGTTATCTATGTTAACTTTTAATTTCAATATTTCACTGATTTTGGTAGGTCTTGTATGATTTCAAGTTCATTCCTGATCCAGTACTCAATATTTCTTATTATTACAGGACGAGATTTCACAGGCAAAGAAGCAGTTGGACAAAAAGGTACAGATATTATCAAATGCATAGCATATCACTAATTTACCTTTTGTCACTGGTATGTTGCTGACCTGCTGTTGGATGGATGCAACTCATGTCCTCTATATAATTTAGCTACGCTTAAATCTAAAATCAGATGGTTATGTAATTAATATAATTCTTCTGTTGCTTGCAGAAACCTAACATTCTGTTATTTGAAAATCATGTTTAAACAGGATGTTGACTATGAGGCATCACTGGCCTCAAAACTCTCGATAGCAAGAAAAATATTCAAATTAGAGAAAGACAAAGTACTAAATTCCAGTTCGTTCAAGCAGTTTTTATCTGAAAACGAGGTATATTTAGTTATTTGCTAGCATTTTATTTAGTTGAAGTACTTGATAACTTATTTCAGACTTACTGTGATTGCGTTCCTTCCATGTTCCAATAGGAGTGGTTGAAACCATATGCTGCATTTTGTTTTCTGCGGGACTTCTTTGAGACATCAGATCACAGCCAATGGGGCCGTTTTTCTCAGTTTTCCAAGGAGAAGGTGCGATCAGTATAACATGCTAAACATTCTTTTAAGAAAATCCTATCATTCGGTTTTATTCTTTCTGAGAGGCGAGACCATATATGGGAAAATGTTCAAGTACTAAGTGATGGCTGTTTCTGTAATTTCTTTCAGCTAGATAAGCTTGTTTCTGAAGGTACCTTGCACCATGACGTTATATGTTTCCATTACTACATCCAGTACCATCTATATATGCAAGTAAGTATTGGTGGTTGTCCTTGTCACTCTGATCTGCATACAGAGTTTTTCTTGCATATGTACTCACTGACATTTATTATCTCCTTCATGTTAGTTATCAGAGGCAGCTGCCTATGCAAGGAAGAAAAAGGTTATTCTGAAAGGAGATTTACCTATTGGTGTTGATAGGAATAGTGTGGATACTTGGGTATACCCCACTTTATTTCGCATGAATACAGCTACTGGTGCACCTCCAGATTATTTCGACAAAAATGGACAAAATTGGGGTTTTCCTACATATAACTGGGAGGAAATGTCAAAGGATAATTATGGGTGGTGGCGAGCTCGTCTGACACAGGTTATTTAATAGCAAATATTTTTTCCTGTCTGGCTGGTCATCTTTTATCGTCATTATTTATCGCCAGTTACCTTGTTCCAGATGGCAAAATACTTCACTGCATATAGGATAGACCATATCTTGGGTTTCTTTAGGATATGGGAGCTTCCAGATCATGCAGCCACAGGTCTAGTTGGGAAATTTAGGCCTTCAATTGCTCTCAGTCAGGTTGGTTTCTGCAGCTGTTAAACAAACTAAAAGAGACTAGAGAGCCTGAAGTTTATCTGACTTTTTCCTATGTTGATTTTCAGGAGGAGCTTCTTAGTGAAGGCCTATGGGATTTCGATAGAATGAGCCGCCCTTATATTCTTCAGGAAACACTGGAGGTTTGTCTTTCTTGTTCCTAAAACAATGATCTATCTTTTTTTTTTAACAGGAAGGAAAACAGGGCACCAGCATGACATTTCTATTCTGTTATAGGAGAAGTTTGGGTCCTTTTGGACAGTAATTGCAGCTAACTTTCTAAATGAGTACAAGAAACAACATTACGAGGTAATGCAATCAGTTATATTCTCTTTTCATGTTTGTTGAACGTATCACCTACTTAAAACCGCATGGCATGAGTAGATTTAGCTTAGGCTTTAGTACAGAAGTCTCCATTTCAAAATCAGCTACGTGCACTCCTTACTGCATTTTTCCATTACATTTCGTCCTCTAATTTCCCTTGCAATTTATTGTTTTGCACGTGTATAGTTCAAAGAGGACTGCAATACAGAGAAAAAGATAATTGCAAAGCTTAAGAACAGTTCTGAAAAATCATTATGGCTGGAGAAAGAAGACAGCATTCGGCGTGGTTTGTTTGATCTACTACAGGTAATTCATATCGAGTGCATATAATCCATGCTACAACTTTCTCTTAACCTATCCTGATCCTTTTCAATCCACATAAAAATATTATTTGAAATTCTCAACAAAATATCATTGAAATCATTAGAAATAAAACATACTGTTTATTCTGCAGAATATAGTCCTTATTAGAGATCCAGAGGACAGCACAAAATTTTATCCCCGCTTCAACCAGGAGGATACTTCAAGTTTTAACGATCTAGATGAACATAGGTAATATTGATTTTATTTAACTCCAATTGTTTCCTTCTCTATGTTCAGGTCGGACAAGACCTTGATCTGCACTTTTGCGTTTTACTCTGTAAATTTACTTCAAGCTAGTTAATGCTGATGAAGTATTTACTTTTTAGTCCAACAGGTTAACAGTGCAGGATCCTTGTGATATTGAACTTTGTTACATACTGCTCCTTTCTGTCCAAAATTTGCTTAGTTCTACTGCTATCGCCTTACTACATACTCTAATAATCGATATTTTTCACTATGCATCTCTAGTAGGCATCAAGAAAAATGAAACTAGTATATTCAGCAGCAGTTTCTTCCCAAGAAAATTATGAAGTACAGTAGCACCCAACGTTTTAGGTCTTGCTAATAGCACTCCCTTATTTATGCAATGAGCACTAACTAAATTGTTCCTTGTGGAGTACGAACTATTTCATCCTCTCATGAAAAACATTGTTTTACAGCAAAAATATCCTCAGAAGATTGTACTATGACTATTATTTTGCTCGCCAAGAGAATCTCTGGCGTCAAAATGCGCTCAAGACTCTGCCTGTGCTTTTGAACTCATCGGATATGTTGGCATGTGGGGAAGATCTTGGCCTTATCCCTGCCTGTGTTCACCCTGTATGATGTTTTCCTGCACATGCTAGTAAACAGCTATTGCTTGTTCTATGCACATAAATGACAGAAATATATTATCCAGGTTATGCAAGAACTTGGATTGATTGGATTGCGTATCCAGAGAATGCCCAGTGAACCAAACTTGGAATTTGGTATTCCATCTCAGTATAGCTACATGACGGTGCGTTTCCCTTCTGTTTACTTGGGTTCAATATGTTCATTGCTACAGATGCACACATACTTAGGTTGTATATGGCAAACTAAAAATGGTTTGGAGAAGCTATTCAGTTTGATGTTCAATTTTGTGTCATATTTTTTTCAGGTTTGTGCTCCGTCATGTCATGATTGCTCCACATTACGTGCTTGGTGGGAAGAAGATGGAGGAAGAAGAAGCCGTTTCTACCAGACTGTAATTGGTAGTGATGACGAGCCGCCATCTCGCTGCACCCCAGAAGTAGCGAACTTTATTGTTAAGCAGCATTTTGATGCTCCATCAATGTGGGCAATCTTCCCACTACAGGTATATAGGTTGGCTTGTTAACTTATATAAAAGATCAATACAGAATAAAGTAGATTAATGTACTTGGGGTGTTCTATTTGTCAGGACCTGCTTGCACTTAAAGACAAGTACACCACAAGACCAGCAAAAGAGGAAACAATCAATGACCCAACTAACCCGAAGCATTATTGGAGATTCCGTAAGTCAATTTTCCAATATTATTATTATTTTCCTTGCTTCATCAAAATTAGGTATTAAGAGTAAACAAATTCAAAAAGAGAATTGGCTATTCTTGACATAATAATACCTTCATACGAGAAAATTCCCATACAATTAATTGGCATAAAGCAATATGTTCACCATGAAAAAGATATGAGGCGATCAGATGATGTCACATTGTTGTCTGGTTTGATCAGTGACGCTGTTAGATCAATCAGATGATGTCAACAGCTGAAACATGCACAATTCAGCATGTGTCCTTATTCTATTGTCAACATGACTTTTTTTCTTGCTGATGGTCTACATGAGCAAATGAAATGCTATCTTCCCAACTACAGATGAACAAAAAGAATATCTCGGCGAGCGAACTTGTAGGATACTATCATTTTCATATGCTAAAGTGACGTCTCTCAAGTCCCATATAAAATTTGCGCATTCCCTGTTGTAAATTTGGCAACCCATAATTGAAGGTGTTTGTTTTTCCTTGCATCTAACTTCTCCCCTCTATTTCTTTAAGGGCTACATGTGACATTGGATTCGCTGTTGGACGATAAGGACATCCAAGCAACCATCAAGGAACTTGTCACAAGTAGTGGGAGGTCATTTCCTGGTAAGGTGGATGGCGCCGAAGAAAGCGGAGAGAAGCTAGCTAAAGTCCAGTTGAATGGTAAACCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026328