Os12g0160400
| Gene Name |
Os12g0160400 |
|---|---|
| Description |
Basic helix-loop-helix dimerisation region bHLH domain containing protein |
| Version |
NM_001072747.1 GI:115487455 GeneID:4351565 |
| Length |
5331 bp |
| Definition |
Oryza sativa Japonica Group Os12g0160400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 12:3023110..3028440 |
| Sequence Coding Region |
3023432..3023523,3023952..3024098,3024228..3024309,3024802..3024843,3024931..3024990 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008405:3023110..3028440 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008405:3023110..3028440 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atggccgtcggtgatgcgctgcggcggctgtgcgaggaggcccggtggtcgtacgccgtcttctggaaggccatcggcgccgccgaccccgtgcatttggtgtgggaggatggcttctgcggccacgcatcgtgctctgctggatctgaggcttctgaggctgggtgcgagtccggcggcgccgtctgcacgcttgttaggaagatcatggcctcgcaggttcatgttgttggagaaggtaccattggccgtgctgcattcactgggaatcatcaatggattgtccatgaaactgccaatgatcacgggctcagatccgaggttgctgctgagatgaacaatcagttcagagctggcattaagaccattgcaattatacctgtgttaccacgtggtgtgctgcagctaggctctactagtgtgattctggaaaacataagctctgtgcaacaatataagaagctgtgctgtcagctaaacaaccggtcgagtatggtcgcatctgcttcagccaaaaatgatttgagccagaaagttcagtcacgatctttacatggtctcccaagtatacacccttatgaacagtgctatggtcatgatgcccgagccttgtcaagtagcacatcagcaaacacgggcaggaacacttccttacttaaggttgcacagagaaatgatcaagccattagagagcaagtcttatatgctcctgatatgaggttcagacagcagctcccttatagtgacaggagagttgatattaacacacacagtagtgctatgagctcaggttttatctcgtctatctcagcatcagtggaaaagtatccattgttgacgaacaacattggacaagtagaacacgggaacatggaagagtcatcagggcccagaaatgttctgttaaaatccctttcatgccggaaccctgttgtccatgaaaatactaacacgagtctatttcatggaggggatgaggtgccggcttttctgaatagtcatgggagttttgattttctccaagcaggtcctagagtagttgaggctaacttgtataacaatggtacgtctagtcaagttttagaccaaagatgcagttccacttctgggatggcagggtataaaccatctgtttcatataaattcccccactctgctcaattcattgtgaaaatggagaatcccagaagacaatcatttcaagaccccgcagctccatcctctggttctgatgtccaagtttcgagtggtttgaaaacaaccactcgtcagtttaacccagagcatatgtgccaaaacaagaagacaaatgaagtcaatgactccagtgctgctgtaagcacgcaggatgtgaaaaatatggaccgacacaagatcctagacatttctaatgagagaacctcctcatttgttatggatcctagtacagaaaatgatttgtttgatatatttggtactgattttcatcaattgcaccgcagtttggatggtgacctctcctggaacactgcaaagcctcagagttcagacagagatgcacctgaatcctcaatttatcttgacagttcaccagccttcggtgcacaggaggatgaattttcttattctgggattttttcgctcactgatactgaccaactattggatgcggttatctcgaatgttaatcctggtggcaagcagatctctggtgacagtgcctcgtgcaagacttcgttgacagacattcctagcacttcttactgtggctcaaaagaaacgaagcaatgcaagtcatctggtgctccacctttgctaatcaagaatgagttggcagtttcaaattttgtcaaacaaccatgtttcctagaaaaggctgaagatggttgtctttcccaaaacaatggagtgcagaaatctcagatacgcctctggattgagagtggacagaacatgaaatgtgaaagcgtgtctgcctcaaacagcaaaggtctggatacagcaaacaaggcaaatcggaagagatctagaccaggagagagtcctaagccacggccaaaggaccgccagcttattcaagatcgtataaaggagctgcgggaactagtacctaatggggcaaagtgtagcattgatgcattattggaaaagaccattaagcacatggttttcttgcaaagtgtgacgaagcatgcagacaacctcaaggattctaacgaatcaaagatacatggtggtggtgagaatggcccgcttctgaaagattactttgaaggtggtgctacttgggcttttgatgttggcagtcaatctatgacatgcccaatcattgttgaagatcttgatcggcctcgtcagatgcttgtggagatgctctgtgaggatagagggatcttcttggagatagctgacttcatcaaaggacttggattaactatcttgaggggtgtgatggaagcacgcaaaaataaaatctgggctcgcttcaccgttgaggccaacagggatgtgactagaatggaaatcttcctctcgcttatgcgcttgttggaaccgagctgtgatggcggcggaggaggcgtgggagataatcctaacaatgtaaaaatacctcctgggattgtgcaacatccggttataccagcaacaggccatcttaggtga</cdnaseq> |
| Protein Sequence |
<aaseq>MAVGDALRRLCEEARWSYAVFWKAIGAADPVHLVWEDGFCGHAS CSAGSEASEAGCESGGAVCTLVRKIMASQVHVVGEGTIGRAAFTGNHQWIVHETANDH GLRSEVAAEMNNQFRAGIKTIAIIPVLPRGVLQLGSTSVILENISSVQQYKKLCCQLN NRSSMVASASAKNDLSQKVQSRSLHGLPSIHPYEQCYGHDARALSSSTSANTGRNTSL LKVAQRNDQAIREQVLYAPDMRFRQQLPYSDRRVDINTHSSAMSSGFISSISASVEKY PLLTNNIGQVEHGNMEESSGPRNVLLKSLSCRNPVVHENTNTSLFHGGDEVPAFLNSH GSFDFLQAGPRVVEANLYNNGTSSQVLDQRCSSTSGMAGYKPSVSYKFPHSAQFIVKM ENPRRQSFQDPAAPSSGSDVQVSSGLKTTTRQFNPEHMCQNKKTNEVNDSSAAVSTQD VKNMDRHKILDISNERTSSFVMDPSTENDLFDIFGTDFHQLHRSLDGDLSWNTAKPQS SDRDAPESSIYLDSSPAFGAQEDEFSYSGIFSLTDTDQLLDAVISNVNPGGKQISGDS ASCKTSLTDIPSTSYCGSKETKQCKSSGAPPLLIKNELAVSNFVKQPCFLEKAEDGCL SQNNGVQKSQIRLWIESGQNMKCESVSASNSKGLDTANKANRKRSRPGESPKPRPKDR QLIQDRIKELRELVPNGAKCSIDALLEKTIKHMVFLQSVTKHADNLKDSNESKIHGGG ENGPLLKDYFEGGATWAFDVGSQSMTCPIIVEDLDRPRQMLVEMLCEDRGIFLEIADF IKGLGLTILRGVMEARKNKIWARFTVEANRDVTRMEIFLSLMRLLEPSCDGGGGGVGD NPNNVKIPPGIVQHPVIPATGHLR</aaseq> |
| Gene Sequence |
<dnaseqindica>323..414#843..989#1119..1200#1693..1734#1822..1881#2322..4001#4131..4232#4353..4496#4596..4721#4825..4992#ggtttggtttggcttggcttggcggctggttctgctgaggctgacgtggcggcgggtggggcccatctcatggctgctgcctctgtggcggcgaggagcggcggcggcggggttaggattccggcgaggaggggcggcgggctccgcgcgaagcaggccgggcgcgccagcttccgcggcgcctaagagaggaggaggagaaagagaaagcagggttctttgctgcttttggtcttccctttcttttcttcttcttcttcttctttatttactcctcctgggaggaagggagggagcttagctagggtttccgaggaggaggatggccgtcggtgatgcgctgcggcggctgtgcgaggaggcccggtggtcgtacgccgtcttctggaaggccatcggcgccgccgaccccgtgtaagcccctctctctctctctctcaaccttctctcctcctgctccatctttgcaagagaacaaaagaaaagaaaaaggggatttcaatgcccattttttgttcggtttggattcttgttcgacattcccattcccgctagatttcgttttgccaagcgtgcgcgcggggaaggaaggagaagattcgcgtgggtatattcctcgcctgctgctgctgctgctgctgctcggtttcttgatactggatactatctagtagtagtagtacttttaccggaatatgaaatagatactacaagttagtggggggaaagaagaagatgaaatgactagtgattttgggggagcaggatggaatgctgagaatgtgctgtgaatttggcatctttgatggtgattctcttcaacatttttgtgcattctgaaggcatttggtgtgggaggatggcttctgcggccacgcatcgtgctctgctggatctgaggcttctgaggctgggtgcgagtccggcggcgccgtctgcacgcttgttaggaagatcatggcctcgcaggttcatgttgttggagaagggtaagcaaaagaatatgatcgtttctttggtttgagtattaatggggttaagtacagtattagctaatgcaatcttgttggtttattgttttcattaattggatggattcttcacttgttgtccttcagtaccattggccgtgctgcattcactgggaatcatcaatggattgtccatgaaactgccaatgatcacgggctcagatccgaggtagtgtggtttcctcttcctttcttgtgaactggtataaatgttacccaatttcggttttgtctggtccatttttgctgttgctgcctcatttaaagcgtggagtcaggggatttataacaatccaacaatccctgtggggttgttttgtcctcacctttatgttccttgtggtcttcaaactttggcatctagtgtagtttgcttaatggttagctgaataatgagtggtcactgtgatgagctagttgcagaagcacacaaatggacatgtgaataagttgaaatgtctatggaggttcttcttgatactgttttccctgatgctgaagttaaccatgatctacttttcatgaggatctataattttctctttcttacttgttttggagattttgaattggaaattcgagttttttttgttgttgttgttgttgttgttgttcttgttgtaatgaacaatgagctaatggttttactaatgacggtcaggttgctgctgagatgaacaatcagttcagagctggcattaaggttagtggaattttggtccttgcatgctagtactagattatatggattgtttacttccaagttcttaacaagttacttgctctgcagaccattgcaattatacctgtgttaccacgtggtgtgctgcagctaggctctactagtgtggtaagataataaagttttcatagattagtatatactagatcatcctacatgtcttgaagtttgttctcttatgttttatcatatgggccatgacgtactattttatggcatttacattgttgactggtcaaatattctgttctctgggtccctatatgtgtatatatatatatttgtggtaaggtcctaggagaacccatcctccttgtggatggtattgggaagttgaaaacaagaacgaattattctctctgctatgtgtctagcccttaggattgttgtgaagaaaaggggggaaaaagactcagctaactgcattaagagaatccacttctgagttttaccataaccattaggacagtagagctctgctaagctttgttgtttatgctttctaaattatttatgttagagcttatgaatgctttattttcttacagattctggaaaacataagctctgtgcaacaatataagaagctgtgctgtcagctaaacaaccggtcgagtatggtcgcatctgcttcagccaaaaatgatttgagccagaaagttcagtcacgatctttacatggtctcccaagtatacacccttatgaacagtgctatggtcatgatgcccgagccttgtcaagtagcacatcagcaaacacgggcaggaacacttccttacttaaggttgcacagagaaatgatcaagccattagagagcaagtcttatatgctcctgatatgaggttcagacagcagctcccttatagtgacaggagagttgatattaacacacacagtagtgctatgagctcaggttttatctcgtctatctcagcatcagtggaaaagtatccattgttgacgaacaacattggacaagtagaacacgggaacatggaagagtcatcagggcccagaaatgttctgttaaaatccctttcatgccggaaccctgttgtccatgaaaatactaacacgagtctatttcatggaggggatgaggtgccggcttttctgaatagtcatgggagttttgattttctccaagcaggtcctagagtagttgaggctaacttgtataacaatggtacgtctagtcaagttttagaccaaagatgcagttccacttctgggatggcagggtataaaccatctgtttcatataaattcccccactctgctcaattcattgtgaaaatggagaatcccagaagacaatcatttcaagaccccgcagctccatcctctggttctgatgtccaagtttcgagtggtttgaaaacaaccactcgtcagtttaacccagagcatatgtgccaaaacaagaagacaaatgaagtcaatgactccagtgctgctgtaagcacgcaggatgtgaaaaatatggaccgacacaagatcctagacatttctaatgagagaacctcctcatttgttatggatcctagtacagaaaatgatttgtttgatatatttggtactgattttcatcaattgcaccgcagtttggatggtgacctctcctggaacactgcaaagcctcagagttcagacagagatgcacctgaatcctcaatttatcttgacagttcaccagccttcggtgcacaggaggatgaattttcttattctgggattttttcgctcactgatactgaccaactattggatgcggttatctcgaatgttaatcctggtggcaagcagatctctggtgacagtgcctcgtgcaagacttcgttgacagacattcctagcacttcttactgtggctcaaaagaaacgaagcaatgcaagtcatctggtgctccacctttgctaatcaagaatgagttggcagtttcaaattttgtcaaacaaccatgtttcctagaaaaggctgaagatggttgtctttcccaaaacaatggagtgcagaaatctcagatacgcctctggattgagagtggacagaacatgaaatgtgaaagcgtgtctgcctcaaacagcaaaggtctggatacagcaaacaaggcaaatcggaagagatctagaccaggagagagtcctaagccacggccaaaggaccgccagcttattcaagatcgtataaaggagctgcgggaactagtacctaatggggcaaaggtatcctcttgttcaccctcacactttaaatgtcctttatgattatttagatcttgaatcccattgaatttagtttggatgtaaattctgttgtgtgctgatggctagcctcatgtcaattgccaacagtgtagcattgatgcattattggaaaagaccattaagcacatggttttcttgcaaagtgtgacgaagcatgcagacaacctcaaggattctaacgaatcaaaggtatacaattcctatcattttctagcgtcacaatgaatagactagcttgcagcatattcaaagagaaattaatgttgcaaacctgatgtcattgctgtgctattggtgaactgtgaacagatacatggtggtggtgagaatggcccgcttctgaaagattactttgaaggtggtgctacttgggcttttgatgttggcagtcaatctatgacatgcccaatcattgttgaagatcttgatcggcctcgtcagatgcttgtggaggtaaatcattctgttattgctgtctttgtagaactagtattttgtgattcttgatgcacaaacactactttccgtttgttgacggtggtgcctattcagatgctctgtgaggatagagggatcttcttggagatagctgacttcatcaaaggacttggattaactatcttgaggggtgtgatggaagcacgcaaaaataaaatctgggctcgcttcaccgttgaggtaagcagcgcaatgtatttgagaaagctctctagttttggttcactatgaatgcaagaacatcttatcctacatgctgtaacatttgattatacccatgcaggccaacagggatgtgactagaatggaaatcttcctctcgcttatgcgcttgttggaaccgagctgtgatggcggcggaggaggcgtgggagataatcctaacaatgtaaaaatacctcctgggattgtgcaacatccggttataccagcaacaggccatcttaggtgagaaaacgagtaggggaaacattatcagaggcatctgaatctctgaacttctgaagtgctaagagtgggagcttcagttcactctcctgccatgactagcattgtcagtgtgcactaagagctggatccttgtcgaaaatacagtgctcttcctgttcagtaggcaacacacccgtagaaagaaaagcctgacggtagatgatgatgcatcgagacatggacaatcagtcagaatgatccttgggccatgttttgcttgtataatcttgtttcagtttgctactgatgtgtttgttggcgttattagtgaattttgtcttgttgatgatctactgaatgc</dnaseqindica> 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| External Link(s) |
