Os12g0160500

From RiceWiki
Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0160500| Description = Similar to BEL1-related homeotic protein 5| Version = NM_001072748.1 GI:115487457 GeneID:4351566| Length = 4954 bp| ...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os12g0160500

Description

Similar to BEL1-related homeotic protein 5

Version

NM_001072748.1 GI:115487457 GeneID:4351566

Length

4954 bp

Definition

Oryza sativa Japonica Group Os12g0160500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3028732..3033685

Sequence Coding Region

3028923..3029690,3029760..3029820,3030485..3030904,3032117..3032121

Expression

GEO Profiles:Os12g0160500

Genome Context

<gbrowseImage1> name=NC_008405:3028732..3033685 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3028732..3033685 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggtggagcagcggtacaggcagtaccaccggcagatgcagggggtggcggcggcgttcgaggcggcggcgggggccgggtcggcgacgacgtacacgtcgctggcgctgcgcaccatctcgcggcagttccggtgcctccgcgacgccatcgcggcgcaggtcagggcggcgagccgggggctcggggaggactgcggcgacgacgagggcggcggtggcggcgggaggacgacggtggggtcgcggctgcggttcatcgaccaccagctccggcagcagcgcgcgatgcagcagcttggcatggtgcacgccgccgccgccggtgggcgccgccggcggcgggtggcggccgcagcgtggcctccccgagcgcgccgtctccgtcctccgcgcttggctcttcgagcatttcctccacccataccccaaggattcggacaaggtcatgctcgccaagcaaaccggcctcaccaggagccaggtgtcgaactggttcatcaacgcgagggtgaggctgtggaagccaatggtggaggagatgtacgccgaggagaccaaggccaaggaggaggaggaggaggagcacgacgcggcggcggccgccgccggcgaccgtggcggcgtggcggagcaggctccgagtaagccggacgacagtgctggcattggcatgtcgtcgtcgtcgccggcggtggcggcgtccaggtcagttggtgtgcacgccggagaccagcacgctcaggcgagcttctacggcggcggcggcggcggcgacgatccgttccagtgcaggatcaagaaggcgaggacgacgacggcggacgagccggcggcggccgcggcgttccacgtctccggcgaggccgccgtgagccaccgggagctgctaatgaagttcactgaggccggcggcgagggcgtgagaacgggccacccgcacgtcaacgacgacgacgacgacgtccctggcggcgccggcgggtactcgctgttcacggcggcgcagtacgggcatcagttcggctcggaccatttcgcgttcgccgggcacggcggcggaggcggcggcggcgtgtcgctcacgctcggcctcccgcacggcgccgaccagacgccggcgtcgtttctcataggcgccggcgccggcagcgacggcggcggcgcgccggtgacgacggccggctacgacatgaacatgcagagcaccaagtcgttggctgctcagctcatgagagacttcgtggcatag</cdnaseq>

Protein Sequence

<aaseq>MRWSSGTGSTTGRCRGWRRRSRRRRGPGRRRRTRRWRCAPSRGS SGASATPSRRRSGRRAGGSGRTAATTRAAVAAGGRRWGRGCGSSTTSSGSSARCSSLA WCTPPPPVGAAGGGWRPQRGLPERAVSVLRAWLFEHFLHPYPKDSDKVMLAKQTGLTR SQVSNWFINARVRLWKPMVEEMYAEETKAKEEEEEEHDAAAAAAGDRGGVAEQAPSKP DDSAGIGMSSSSPAVAASRSVGVHAGDQHAQASFYGGGGGGDDPFQCRIKKARTTTAD EPAAAAAFHVSGEAAVSHRELLMKFTEAGGEGVRTGHPHVNDDDDDVPGGAGGYSLFT AAQYGHQFGSDHFAFAGHGGGGGGGVSLTLGLPHGADQTPASFLIGAGAGSDGGGAPV TTAGYDMNMQSTKSLAAQLMRDFVA</aaseq>

Gene Sequence

<dnaseqindica>3996..4763#3866..3926#2782..3201#1565..1569#aatagatattgtcatccatgctcttgatacctagctaggttccatttctcactatcctcttgacctccatttttttttccttttcacttctcttgttcttgctacctaaagggggaggaggaggaggaaaagggaggaagaagagacccattcttattctaatatacagtacttagcacgtgttccagctcaatccttgaggtaattaacaaagctaatcagcaatcccaatggagtattgtgtgactttgtgtttgcttatgtgttatacacatgcatgtgcactctttggttgttaaatcagctgatgaagatggatggatcaccttttgttttgtttctcttcttaattttttatgtgctagctagagatgcttctcctacatctctatctttctctttctctttttttttcctctcatgcatgacttgagttcttgcatggttccctctcctacatatagcatatatacatctctctcacaaaaagggaaaaggtgtgcatacatggctccaattttagcccactcttgacactctcctcaattcactaataatatactacatatattatttcctaatttccatggttcaattgtagcagctagatctctcttgtttgattctgaaatataattaattagttttgttatgatttggtggttgattgatcttgcttattgatgagcttcttggttaatttcttggcttcttgtcacaggcaaattcacagctttgtcataggaatcatacactagttgtccaagaatctcagcgtatttgctacgtagatcaagtagacaagcttgaattgttcgatcgatcgggtcgtcggagttgggggccaccgcgatggcggcgtacttcacaggcggcggcgccggcaccgacgtcgtccaggccgccggcaccgacggcctgcagacgctctacctcatgaaccccagctacgtcggcttcacggacgccgccgcggcgcccggcggcggcgccgccgccgccaacatggtgttcctcaactcggcggtgagcaccctcacgccggcgagcttcagccaccaccaccagccgacaccggcggcgcagcacttcgtcggcatccctctccagtcggggtacaacctgtggggccctgacgccaccggcggcaacgacgtgtcgccgccacgccacggcgcccagcagcaagcgccagcagcagctggcacgtcggcggcggcggtcagccccgtgctgagcctgtcgtcgcgtgaggcggcgccgccggtcaccgtggccgccgccgccgccgccgccgccgtccccggcggcacggaccaggagaaggtggtgatgcgctccaggtacctgaaggcggcgcaggagctgctcgacgaggcggtgagcgtcagcaagggcgccgcgacggcggtgaagaagaaggaggactcggagggcggcgtgtccggtggcggcggcggtgcggaggacggtggcggcagcaagagcggcgccgccgccgagatgtcgacggcggagcggcaggagctgcagatgaagaagagcaagctactgaacatgctcgatgaggtaattagtgtaattcataattaagtacttaattatttaccagcctaagcttcagtaataaagaagcaagtgtcactgaaccgatcactgcactgttaaagtgttcatggtttttcttgcaactgactgatgatatatatatatatatatatatatatatatatatatatatatatatatatatcctctgttggtggcaactaatcctgataggcactagacactgcaaatattttcctctctatttactcacatattaatattttgattctacaattttaattagtttttaatcctcgtctagaaattatcgttttttttgtaatttattggtatatataatacaatatccttacgtgttccaatatccaaacatgttactttttcttgaccaatcaatgcaatgccctgctaattcggtgactggaaaatcacccaattttaagagaaaacaaaaaacaagaagataaagcagtgatgtggctaatgcaccatactgcttttgtggctagctagctaatcatgaatgaacatgaactgataagattagataagcacaagaagaataatttatacttgtttcagttgtgcactactccaactttaatttgattgcttgctgcctgctcaaatatacagtctctcatttgtctgtacgggctggtttgaggtctcaattagacttaccaatatttgataattttaatagtgtttagtgtctatttggtttgaagtcaaattttggcatgcctaagaaaataggtcatttcaatagtgaatttaggctattttggcttcaatccaaatataactttaccttaccaaaattagtcatgccaaaacttgtcaaaatttggtactgacaaaatttggtaaggcctatttaggccaaaaacaaaaccaaccctacactacttcactatagtatatattaataggttttttatcaatttaattaactaaatttaacttttttttaagatgataaaataacaacctacctttacttccaaaaaaaactacaaccatctattacacaacccacttaggaaaataaaatttatgaattaagaatacaaagactaaaaactaacctacatttatccaattctacttgtaataaatcctcctcatctgaagttggcaaataactaattaaatgactgttgtatttaattaactaaagtaattagtggtaattaacttgtgcaggtggagcagcggtacaggcagtaccaccggcagatgcagggggtggcggcggcgttcgaggcggcggcgggggccgggtcggcgacgacgtacacgtcgctggcgctgcgcaccatctcgcggcagttccggtgcctccgcgacgccatcgcggcgcaggtcagggcggcgagccgggggctcggggaggactgcggcgacgacgagggcggcggtggcggcgggaggacgacggtggggtcgcggctgcggttcatcgaccaccagctccggcagcagcgcgcgatgcagcagcttggcatggtgcacgccgccgccgccggtgggcgccgccggcggcgggtggcggccgcagcgtggcctccccgagcgcgccgtctccgtcctccgcgcttggctcttcgagcatttcctccacccgtaagtaatcaaattttgaattttaaaatttaaatttgtagttgatttttggggttttttcttattttccttttttaaaacaagccttagtttttaagccactaataatacaaatataatagtttgcttcactcaatatttttccacagctcaatttctcaaagaaaaaaaacaatatgtatttccaaagatgagcagttgatggcaaaatattaaaatggcatgctccataagatattattgaaatgtacaagatttgtttgaaataaaaacatccatgcatctcccccaaaatcgtactagaaacatgtagggccttgcaccttgtctcttcttccctgaaaaaaaaaagtactacaacatgtaaatgcatatgcagactctaattaatatctccttcgtcacataaaaaactcaattataattgtaaatttaaaatataagtgtttaggtttgaaattaggattggttttttttatatcacgaagtagtactatttaaagctttaattcttcatcagcatatatagtactcctactattacatgaacacgtagagacaagtgatcaagctgcattttcgagtgcacgctcaaatcggtgaatgaatatttcctcgtgtcgacgtctcattggtcgctgagattcgttgtgacgtcatgcagataccccaaggattcggacaaggtcatgctcgccaagcaaaccggcctcaccaggagccaggtacgtacgtatacgtctacgtacaatactacgtctacgtatgtttgaagtacgtgtacgtatttgtaggtgtcgaactggttcatcaacgcgagggtgaggctgtggaagccaatggtggaggagatgtacgccgaggagaccaaggccaaggaggaggaggaggaggagcacgacgcggcggcggccgccgccggcgaccgtggcggcgtggcggagcaggctccgagtaagccggacgacagtgctggcattggcatgtcgtcgtcgtcgccggcggtggcggcgtccaggtcagttggtgtgcacgccggagaccagcacgctcaggcgagcttctacggcggcggcggcggcggcgacgatccgttccagtgcaggatcaagaaggcgaggacgacgacggcggacgagccggcggcggccgcggcgttccacgtctccggcgaggccgccgtgagccaccgggagctgctaatgaagttcactgaggccggcggcgagggcgtgagaacgggccacccgcacgtcaacgacgacgacgacgacgtccctggcggcgccggcgggtactcgctgttcacggcggcgcagtacgggcatcagttcggctcggaccatttcgcgttcgccgggcacggcggcggaggcggcggcggcgtgtcgctcacgctcggcctcccgcacggcgccgaccagacgccggcgtcgtttctcataggcgccggcgccggcagcgacggcggcggcgcgccggtgacgacggccggctacgacatgaacatgcagagcaccaagtcgttggctgctcagctcatgagagacttcgtggcatagtgattagtacagacataattaattaattaattaattaattagttaattagggaatgtgttcatatagaaataagggttaagccttgacatgcttgagattactcattggtatatatatattgggatgtaaacatgtacatgggggtattggataatgtatacagtagatatatacaggacagtattgcttg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0160500, RefSeq:Os12g0160500