Os12g0161100

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0161100| Description = U box domain containing protein| Version = NM_001072750.1 GI:115487461 GeneID:4351568| Length = 1314 bp| Definition...")
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Gene Name

Os12g0161100

Description

U box domain containing protein

Version

NM_001072750.1 GI:115487461 GeneID:4351568

Length

1314 bp

Definition

Oryza sativa Japonica Group Os12g0161100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3067809..3069122

Sequence Coding Region

3067809..3069122

Expression

GEO Profiles:Os12g0161100

Genome Context

<gbrowseImage1> name=NC_008405:3067809..3069122 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3067809..3069122 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagtacggcacgccgcagcatttcatgtgcccgatctcgctgcagccgatgcaggatcccgtcacctcccccaccggcatctcctacgaccgccgcgccatccaccgctggctcgccgccggccactcctcctgccccgtcaccggccaccccctctccctctccgacctcacccccaacctcaccctccgccgcctcatccactcttggcaccactccactactacgccatttcccgtcgagcgttcgacgccgtcgccgccgccgcttcgggaggttgacgacgacgacgtcgtggagaggctggtgatggagatggagggtggtggtggtggttcttggtgccccccgtcgtgtgacttgctccgcgaggcggcggcggtcgcggcggggagcggcgtcgcgcggaggcgcatggtgggcgccggcgtgctccgccgcgtgctgcgtttggtggtgtggtgtggcgggagggggtcgtcgtcgggtgaggcggcggtgatggtggagatgtttgatgcgtgcctcgctctcttccacgcgctcgacgtctccgccgacgagctccgcccgctcgtcgccgacggccacgacctcgtcgacgcggtgacgcgcgtgatggcgacactcgaggccggcgacgcgaacgcgacgagggcgagggagagcgcggtgcggctgctggaggccgtgacggaggccgccgacgcgccggtcctggagcggctgagcccggagttcttctccgccgcgacggccgtggtgcgcgaccgcggcgccgtgtccccgggcgcggcgcgcgcggcggtgcgggcgctggcgaacgcgtgccgcgcccgcgcgagcggcgcctgcaggaaccgcgcgctcgccgtggacgccggggcggcgcgcgaggccatcgagctggagctcgacgcgtggtcgtcgccgcaggccccgggggggcggcgcgccacggaggccgtgatggcgctgctggcggagctgtgcgcttgcgcggaggggcgcgcggcggtggcgtcgcacccggcggggatcacggtggtggcgaggcgggtgctgcgcgtgtcggccgccgccgacgcgtgcgccgtgcgcgtgctggcggccgtggcggggcgggcggcgtcgccggaggtgcttcgcgagatggcgcgcgtcggcgccgtcgggaagctgtgctgcgtgctgcaggcagagtgcgacgccggcgtgaaggaggcggcgagggcggtgctgaggatgcactccggcgtgtggagcggatcgccatgtgtcagcgcttacctgctgtctcgctacctctaa</cdnaseq>

Protein Sequence

<aaseq>MEYGTPQHFMCPISLQPMQDPVTSPTGISYDRRAIHRWLAAGHS SCPVTGHPLSLSDLTPNLTLRRLIHSWHHSTTTPFPVERSTPSPPPLREVDDDDVVER LVMEMEGGGGGSWCPPSCDLLREAAAVAAGSGVARRRMVGAGVLRRVLRLVVWCGGRG SSSGEAAVMVEMFDACLALFHALDVSADELRPLVADGHDLVDAVTRVMATLEAGDANA TRARESAVRLLEAVTEAADAPVLERLSPEFFSAATAVVRDRGAVSPGAARAAVRALAN ACRARASGACRNRALAVDAGAAREAIELELDAWSSPQAPGGRRATEAVMALLAELCAC AEGRAAVASHPAGITVVARRVLRVSAAADACAVRVLAAVAGRAASPEVLREMARVGAV GKLCCVLQAECDAGVKEAARAVLRMHSGVWSGSPCVSAYLLSRYL</aaseq>

Gene Sequence

<dnaseqindica>1..1314#atggagtacggcacgccgcagcatttcatgtgcccgatctcgctgcagccgatgcaggatcccgtcacctcccccaccggcatctcctacgaccgccgcgccatccaccgctggctcgccgccggccactcctcctgccccgtcaccggccaccccctctccctctccgacctcacccccaacctcaccctccgccgcctcatccactcttggcaccactccactactacgccatttcccgtcgagcgttcgacgccgtcgccgccgccgcttcgggaggttgacgacgacgacgtcgtggagaggctggtgatggagatggagggtggtggtggtggttcttggtgccccccgtcgtgtgacttgctccgcgaggcggcggcggtcgcggcggggagcggcgtcgcgcggaggcgcatggtgggcgccggcgtgctccgccgcgtgctgcgtttggtggtgtggtgtggcgggagggggtcgtcgtcgggtgaggcggcggtgatggtggagatgtttgatgcgtgcctcgctctcttccacgcgctcgacgtctccgccgacgagctccgcccgctcgtcgccgacggccacgacctcgtcgacgcggtgacgcgcgtgatggcgacactcgaggccggcgacgcgaacgcgacgagggcgagggagagcgcggtgcggctgctggaggccgtgacggaggccgccgacgcgccggtcctggagcggctgagcccggagttcttctccgccgcgacggccgtggtgcgcgaccgcggcgccgtgtccccgggcgcggcgcgcgcggcggtgcgggcgctggcgaacgcgtgccgcgcccgcgcgagcggcgcctgcaggaaccgcgcgctcgccgtggacgccggggcggcgcgcgaggccatcgagctggagctcgacgcgtggtcgtcgccgcaggccccgggggggcggcgcgccacggaggccgtgatggcgctgctggcggagctgtgcgcttgcgcggaggggcgcgcggcggtggcgtcgcacccggcggggatcacggtggtggcgaggcgggtgctgcgcgtgtcggccgccgccgacgcgtgcgccgtgcgcgtgctggcggccgtggcggggcgggcggcgtcgccggaggtgcttcgcgagatggcgcgcgtcggcgccgtcgggaagctgtgctgcgtgctgcaggcagagtgcgacgccggcgtgaaggaggcggcgagggcggtgctgaggatgcactccggcgtgtggagcggatcgccatgtgtcagcgcttacctgctgtctcgctacctctaa</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0161100, RefSeq:Os12g0161100