BGIOSGA026425

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Revision as of 06:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026425| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026425, complete gene.| tag = OsI_273...")
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Gene Name

BGIOSGA026425

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026425, complete gene.

LocusTag

OsI_27394

Ensembl Transcript ID

BGIOSGA026425-TA

Ensembl Protein ID

BGIOSGA026425-PA

Length

4415

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27285753..27290167

Sequence Coding Region

27285753..27285929,27286279..27286333,27286467..27286678,27287114..27287188,27287478..27287547
,27287636..27287781,27287867..27287912,27287995..27288047,27288143..27288287
,27288574..27288692,27288800..27288871,27288965..27289068,27289324..27289380
,27289490..27289688,27289799..27289942,27290048..27290167

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27285753..27290167 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27285753..27290167 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCAGTGCAGAGAACAGATGCTGCCTCTTGGCTCCGTGAGCTGGTTCTTGTTTACGCCATGTGCTGGACAGTCTCACTGGGTTTTGTTGCGGGTCAAACCGGGCAGTTGAATGTCGATGCCTCGCCGCAGAATGCAAGGAAGATCCCTGATAAGATGTTCGGTATATTTTTCGAGGAGATCAACCATGCTGGGGCTGGTGGGTTGTGGGCAGAGCTTGTAAGTAACAGAGGTTTTGAGGCTGGTGGACCTAATACACCTTCAAACATTGACCCATGGCTGATAATTGGGAACGAATCAAGTATCATTGTTGGGACTGATAGGACATCCTGTTTTGAGAAAAATCCGGTGGCACTTCGGATGGAAGTTCTTTGTGATTCTAAAGGAACCAATAACTGCCCTTCTGGAGGTGTAGGAGTCTACAATCCTGGTTATTGGGGCATGGCTCCAGCTTACAACCAGCAAAGTGGGGTGATTTGGCTCGACCAGGTGTCAGTTATGCCATCGGATACCTACATGGGACACGGTTTTAGGAAAGATCTCGCTTCTATGTTGGCCAATTTAAAACCTCAATTTCTTAAGTTTCCAGGTGGTAACTATGCCATGGGAAATTATCTGCGAAATGCATTTCGATGGAGTGAAACTGTGGGTCCATGGGAGGAAAGACCCGGCCACTTCAATGATGCCTGGGGATACTGGACTGATGATGGACTTGGATTCTTTGAGTTCCTTCAGCTAGCTGAAGACCTCGGTGCTTCGCCAGTATGGGTGGTCAATGATGGAGCAAGCCAAAATGAAGAGGTATCTACTGCAACAATTGCATCATTAGTGAAGGACGTGGTTGATGGCATCGAGTTTGCCAGGGGAGGGCCCAAGACTACATGGGGTTCAGTTCGTGCAGCGATGGGTCATCCACAACCCTTTAACCTTGACTATGTTTCAATAGGGAATCAAGAATGCTGGATGCTCTATTACAGAGGCAATTACCAAAAATTCTATTCCGCGATTAAAGCTGCCTATCCAGACATCAACGTCGTGTCGAGTTGTGATAAATCCACTATTTCTCCGTCCAACCCTGCCGATCTATATGATGTTCATGTTTATACCTCATCTAGTGATATGTTTTCCAGAACTAGTATGTTTGACAATATGACGCGCAGTGGACCGAAGGCAATTGTAAGTGAGTACGCTGTGACTGGAAAGGATGCTGGCAAAGGAACACTGGTAGCAGCACTAGCAGAGGCAGCATTTCTCATTGGATTAGAAAGAAACAGCGACGTGGTAGAGATGGCAAGCTGTGCACCGCTCTTTGTAAATGACAATGATCGCAGATGGAGTCCAGACGCAATTGTGTTCAACTCATGGCAGAACTATGGATGCCCAAACTACTGGATGCTACATTTCTTCAAAGATTCATGCGGCGCAACGTTCCACCCATCAAACATTCAGATTTCCAGCTACAACCAGCTGGTTGCATCTGCCATCACTTGGCAGAATAGCAAAGACAAGAGCACTTACCTGAAAATAAAGCTAGTGAACTTTGGCAACCAAGCTGTGAATCTCAGCATATCTGTGTCTGGGCTGGATGAGGGCATCAAGAGCTCAGGGTCGAAGAAGACCGTGCTTACTTCCAGCGGGCCGCTTGATGAGAACTCATTCCAGGAGCCACAAAAGGTGGCGCCAGTGTCGAGCCCGGTGGACAACGCGAATGAGCAGATGGGCGTGTTGGTGGATCCATACTCCCTCACGTCGTTCGACCTGCTGCTGCAACCGAGCAAGCACTCGACCATATGA</cdnaseq>

Protein Sequence

<aaseq>MAVQRTDAASWLRELVLVYAMCWTVSLGFVAGQTGQLNVDASPQNARKIPDKMFGIFFEEINHAGAGGLWAELVSNRGFEAGGPNTPSNIDPWLIIGNESSIIVGTDRTSCFEKNPVALRMEVLCDSKGTNNCPSGGVGVYNPGYWGMAPAYNQQSGVIWLDQVSVMPSDTYMGHGFRKDLASMLANLKPQFLKFPGGNYAMGNYLRNAFRWSETVGPWEERPGHFNDAWGYWTDDGLGFFEFLQLAEDLGASPVWVVNDGASQNEEVSTATIASLVKDVVDGIEFARGGPKTTWGSVRAAMGHPQPFNLDYVSIGNQECWMLYYRGNYQKFYSAIKAAYPDINVVSSCDKSTISPSNPADLYDVHVYTSSSDMFSRTSMFDNMTRSGPKAIVSEYAVTGKDAGKGTLVAALAEAAFLIGLERNSDVVEMASCAPLFVNDNDRRWSPDAIVFNSWQNYGCPNYWMLHFFKDSCGATFHPSNIQISSYNQLVASAITWQNSKDKSTYLKIKLVNFGNQAVNLSISVSGLDEGIKSSGSKKTVLTSSGPLDENSFQEPQKVAPVSSPVDNANEQMGVLVDPYSLTSFDLLLQPSKHSTI</aaseq>

Gene Sequence

<dnaseqindica>1..177#527..581#715..926#1362..1436#1726..1795#1884..2029#2115..2160#2243..2295#2391..2535#2822..2940#3048..3119#3213..3316#3572..3628#3738..3936#4047..4190#4296..4415#ATGGCAGTGCAGAGAACAGATGCTGCCTCTTGGCTCCGTGAGCTGGTTCTTGTTTACGCCATGTGCTGGACAGTCTCACTGGGTTTTGTTGCGGGTCAAACCGGGCAGTTGAATGTCGATGCCTCGCCGCAGAATGCAAGGAAGATCCCTGATAAGATGTTCGGTATATTTTTCGAGGTGAGACTGAATCTGGATATTGGTATCTGTTTAGAACAACATTTGTTTTCTCACTCAAAAAGAAAATAGAACAAGCATTTTTGTTCTAACCGGTATACGAACTAAAAGGGACAATTACTTGTATAAACTTGGTGCCAGCACAAACATTTTTCCTAGTTGTAGACCATATTGTTCAGATAGCATTTCTAGTTATTTACTGAATCTCATACAATTAAAGTATGCACTGTTTGGAACACAGTTATTTTCTCCTGATTTGCAACATTTTCCTATATATAGTACCTGCATATCAAATGAGGTTGCTTCGACTTCCATGCTGGGAGCTTGAATATATTTGTGGTTCTACTTGTAGGAGATCAACCATGCTGGGGCTGGTGGGTTGTGGGCAGAGCTTGTAAGTAACAGAGGTAAGGCAAAGCATATCTGTGTTAATCAAGATGATAGAAGTTATAGAGGAGCTTGTAAGATGATAGGAGGAACAGCGGTGGTTGGGATATCGTACTTTTGCTTAATGTTTGTAGTGCTCAAATTTATTTCCAGGTTTTGAGGCTGGTGGACCTAATACACCTTCAAACATTGACCCATGGCTGATAATTGGGAACGAATCAAGTATCATTGTTGGGACTGATAGGACATCCTGTTTTGAGAAAAATCCGGTGGCACTTCGGATGGAAGTTCTTTGTGATTCTAAAGGAACCAATAACTGCCCTTCTGGAGGTGTAGGAGTCTACAATCCTGGTTATTGGGGCATGGTATGATGTGTTTCTTATTTATTTATCTGTCCGTCTACAATTTTTTTTGAAGTTTACGTAATCTTATTTGACAGTTTAAATTTGATCTGGCGTGTATTTAACTGATTAAACATCATGGAATACACTATATAGTATTTCTTCACATTTTCCAGAATATTGAAAGAAGAAGGGTTTATAAGGTGGGCCTGCACATTAGATCTTCAGATGCAGTATCCTTAACTGTTTCCTTGACAAGCTCCGATGGTCTGCAGAAACTGGCCTCTCACACCATAACGTAATATTTATGTTTCCATTAATATCGCTGGGATGCTGCATTTTTTTCCCTAATAATTGCTTGAATTTCCATGTTGCTTCCAGGGCTAGCAAGAAACAGTTTGCTAAATGGACAAAGATAGAGTTTCATCTGAAATCTAGCCAAACCAATACTAATTCAAGGCTCCAGCTTACAACCAGCAAAGTGGGGTGATTTGGCTCGACCAGGTGTCAGTTATGCCATCGGATACCTACATGGTATACTTTATTCATGTCTCATTTTATTTCTTTTGGTGTACCATTATCTTTACTTATTTCGTGCTTCAGCTGCACAGTTTTGCAGACTATTCATCAGTAAACGCCAGTAGACAACTATGATTTTTTTAAGAGCAAACCCATCACTATACTGGATGGCCCATATCCTATAAGGGAAATTCCTTTTTTGCCGGGTCTATAAGGGAAATTCCTACTGAGTTGCCATCAGATTTACAGGTGTTTTATACTTATCAGTTCCCACCTTTTATTCATTGTTATGTTTTCATTTTAGGGACACGGTTTTAGGAAAGATCTCGCTTCTATGTTGGCCAATTTAAAACCTCAATTTCTTAAGTTTCCAGGTTTGCCAACTTTACATCATATATTTTTTTTCTGAAGTTAGGTATATCAATATTATCATATAGTTTTGATAATATGTATCAAACTTAGGTGGTAACTATGCCATGGGAAATTATCTGCGAAATGCATTTCGATGGAGTGAAACTGTGGGTCCATGGGAGGAAAGACCCGGCCACTTCAATGATGCCTGGGGATACTGGACTGATGATGGACTTGGATTCTTTGAGTTCCTTCAGGTAATTGGAACGTAGTCCATGACTTCAAAACTAATATTTATTAAAATATACTTCATAAGTTCATATTGATATTCATATACTGCAGCTAGCTGAAGACCTCGGTGCTTCGCCAGTATGGGTGGTCAATGATGGTAGTTCAAATCTCCATGGATTATTAGGTACAACTAACACTCTGTTTCATGTTGTGTCAATAAACTATTTTCAACATTGCAGGAGCAAGCCAAAATGAAGAGGTATCTACTGCAACAATTGCATCATTAGTGAAGGTTTGTTCTTCCAAAATATTCAATCCTTTGATAAAACGATCAATCTAGTACATCAATACCTTGTTCCCCATTTCCTTCGTTCTTGTAATGTTCAGGACGTGGTTGATGGCATCGAGTTTGCCAGGGGAGGGCCCAAGACTACATGGGGTTCAGTTCGTGCAGCGATGGGTCATCCACAACCCTTTAACCTTGACTATGTTTCAATAGGGAATCAAGAATGCTGGATGCTCTATTACAGAGGTCTGTAGCTCTTCAGTTGCACGTCCTTCCTAACTTCATACCAAGAATTGATGTTTGAACTTAATGTATCATATTCCTGTACTTCATGTTGGAAATTTTTGTTAATCGAATAATGTCATGTTTGTGCTTGCAGATGATAGACCAAGAGTTTCCTTTTCCTTCTTATACATCAATTTTTAATAGCGTTTTAGTCCTCTATAAGATAATTTGTAAAATAATTTCATCTACCTTTATATCTTGTGGGTAAGCAGGGAGAGCTCATATTATATGATCTTTCAATTAACAGGCAATTACCAAAAATTCTATTCCGCGATTAAAGCTGCCTATCCAGACATCAACGTCGTGTCGAGTTGTGATAAATCCACTATTTCTCCGTCCAACCCTGCCGATCTATATGATGTTCATGTAATGTCTATTCATTATGTTCCTTTCCTTGTTTGTTTTCACAATTTCGTGTTTTTTCCAAATTATGGTTTCGTTTATGGCTGACAAAAACATCATCTATACCACAGGTTTATACCTCATCTAGTGATATGTTTTCCAGAACTAGTATGTTTGACAATATGACGCGCAGTGGACCGAAGGTATGCTCAAATGTTATCCCTACATCTGATATACATAGATACTTCCACTTTCCATGCTCAGAAATTGACTTGGGGAGCTCTATGACTCTTTAGGCAATTGTAAGTGAGTACGCTGTGACTGGAAAGGATGCTGGCAAAGGAACACTGGTAGCAGCACTAGCAGAGGCAGCATTTCTCATTGGATTAGAAAGAAACAGGTTAATAATCATACTTTTTTTAGAGGAATATTTATACTTTTATTTTCTCTCCATCATGGATTTCTGCTGTGTAAGCTCTGCCATAAATTGGTCCATGATACCAAAGATTTGAAACTGCTTGAAGATTAAAGCTTTGGGCATCAAAGGGCAGTGTGAACGAACATGCTTCCCCTTCAGGCTACCATGTCTGGGCTTTCTGCATCACTGGTTGATTGCATTGCAAAGATAAACATTCCGTACCTTGTTTTCCTGCAGCGACGTGGTAGAGATGGCAAGCTGTGCACCGCTCTTTGTAAATGACAATGATCGCAGGTAAGGATCCAACAACTCAGGAATTCTTATTTTTCAGATTGCTTTCTTTGTGTCATATCTGACTGAGTTCACAACCCTCAAAAATAAAATGAAATGATGCATACCATAGATGGAGTCCAGACGCAATTGTGTTCAACTCATGGCAGAACTATGGATGCCCAAACTACTGGATGCTACATTTCTTCAAAGATTCATGCGGCGCAACGTTCCACCCATCAAACATTCAGATTTCCAGCTACAACCAGCTGGTTGCATCTGCCATCACTTGGCAGAATAGCAAAGACAAGAGCACTTACCTGAAAATAAAGGTGCGAACTTTGTTAAGCTGCTCTTTGTTTCAGAGAGAGTGAGCTATGCATTGGTTTAGCTTGGAAATGACCAAGTGAGCACAAAGCGAAACTTTTTTTTTTTTTTGCAGCTAGTGAACTTTGGCAACCAAGCTGTGAATCTCAGCATATCTGTGTCTGGGCTGGATGAGGGCATCAAGAGCTCAGGGTCGAAGAAGACCGTGCTTACTTCCAGCGGGCCGCTTGATGAGAACTCATTCCAGGAGCCACAAAAGGTTAGTACACTACACACTGACTGACAGCTGATCATGTATCCTATCCTGTAAATTAAACAAAACAGATGGTAGTAACTATATTGAATGTGTACGAAATTGTTGTAGGTGGCGCCAGTGTCGAGCCCGGTGGACAACGCGAATGAGCAGATGGGCGTGTTGGTGGATCCATACTCCCTCACGTCGTTCGACCTGCTGCTGCAACCGAGCAAGCACTCGACCATATGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026425