Os12g0161500

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0161500| Description = Hypothetical protein| Version = NM_001072751.1 GI:115487463 GeneID:4351570| Length = 4161 bp| Definition = Oryza sa...")
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Gene Name

Os12g0161500

Description

Hypothetical protein

Version

NM_001072751.1 GI:115487463 GeneID:4351570

Length

4161 bp

Definition

Oryza sativa Japonica Group Os12g0161500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3086347..3090507

Sequence Coding Region

3086803..3087293,3089199..3089323,3089422..3089634,3089727..3090490

Expression

GEO Profiles:Os12g0161500

Genome Context

<gbrowseImage1> name=NC_008405:3086347..3090507 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3086347..3090507 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggctaaaggtgattccaagtcaaatcatgtgcttgcacctatgctcagaaaggaaggattgctagctaactcgattgaaaagtcaaatccacaactaacgtccccaattcgtgcgcacccaattcatgcattggtgcgcacgaagaaaggaattccagctagatcagttttaaagtcaaatccacaaccaattcgcccaaaacaaatgcgtggatcggtacgcggtgttagcttaaaggggcaatcaacaatggcaaatgataatagtggtgaagaattgaaatcttgcaaggtgaaaaattattctatttcaaaagagtctgcaaaggaactcatggtgcacaagggcaattcatacgaagacaataaatgtgataagatatgtggtgaagttacgatgggcgatcgtaaacatcatgtaaatttaggctcaactaagagtttgaagagagattacattccttctacatgtggtgatcattataaggataacacgaaggggaatgaagttccaaatcctagcccattaacaaaagatgggcctaagaaacatgatagagatgagtgtgaagattataagaatctaaggcctactaagaaacggagacgatatattgtaaatgttgatgaagaggatgattatgatgacaaaaatcctatggatattaaagattcaaccaaagtcgctatgccaattgccgcagagtctatcaagagacagttctatcattgtatacaaccaattgatgaacctatctggagcggaatctttaagattgggggcaatgattatataccattctcagcacatctatcaactaaatcatgcaagaaagtgtgggatttgtcggtatcaataccttcaattgtccaagtgacaaagctttctaggtcagtggtctggcctaagagtttggaggcatcaagtcccacagatgacagcattggcttgtatttcttcccccctaaaatgaggctagataaaggcatggatcagctagttaaggaaatcgtggagaaggatatggccttatctgctgttattggtgaagctcagatgctaatgtttccttctacactattgcctgaaaaatatcgaacttttcaagggaagcactacctctggggagtatttaaacgtagaggaggagacgagcaacaagctgcagccatggcggctgagcagcagcgtggttcagatcagcgtgtcaagcaggagcaagagaacacacagtttcagggtgacgagacacagcaacggatcaagaaaccaaacagtaacctgcaggaaacggcagtgatcaagcagcagccgtcgtcgccgtcctcgtcgtcggtgacggctgcccacattggcgtggacgtagtgcaggagaagagcacggcagctagcggagggcgtcctgctgtgcctgcagggagccatggaagggtgatcggcttggtggtccggcaaactccgggggtggaggagctgatccagcagatgcggcgcggaggcgcgctgctggctaccatggagggggagatgatgggaggttttgaagcaaacgacgacgacggcgcgaagaaattcaagatggtggagtga</cdnaseq>

Protein Sequence

<aaseq>MAKGDSKSNHVLAPMLRKEGLLANSIEKSNPQLTSPIRAHPIHA LVRTKKGIPARSVLKSNPQPIRPKQMRGSVRGVSLKGQSTMANDNSGEELKSCKVKNY SISKESAKELMVHKGNSYEDNKCDKICGEVTMGDRKHHVNLGSTKSLKRDYIPSTCGD HYKDNTKGNEVPNPSPLTKDGPKKHDRDECEDYKNLRPTKKRRRYIVNVDEEDDYDDK NPMDIKDSTKVAMPIAAESIKRQFYHCIQPIDEPIWSGIFKIGGNDYIPFSAHLSTKS CKKVWDLSVSIPSIVQVTKLSRSVVWPKSLEASSPTDDSIGLYFFPPKMRLDKGMDQL VKEIVEKDMALSAVIGEAQMLMFPSTLLPEKYRTFQGKHYLWGVFKRRGGDEQQAAAM AAEQQRGSDQRVKQEQENTQFQGDETQQRIKKPNSNLQETAVIKQQPSSPSSSSVTAA HIGVDVVQEKSTAASGGRPAVPAGSHGRVIGLVVRQTPGVEELIQQMRRGGALLATME GEMMGGFEANDDDGAKKFKMVE</aaseq>

Gene Sequence

<dnaseqindica>3215..3705#1185..1309#874..1086#18..781#ataaaaacataggtccaatggctaaaggtgattccaagtcaaatcatgtgcttgcacctatgctcagaaaggaaggattgctagctaactcgattgaaaagtcaaatccacaactaacgtccccaattcgtgcgcacccaattcatgcattggtgcgcacgaagaaaggaattccagctagatcagttttaaagtcaaatccacaaccaattcgcccaaaacaaatgcgtggatcggtacgcggtgttagcttaaaggggcaatcaacaatggcaaatgataatagtggtgaagaattgaaatcttgcaaggtgaaaaattattctatttcaaaagagtctgcaaaggaactcatggtgcacaagggcaattcatacgaagacaataaatgtgataagatatgtggtgaagttacgatgggcgatcgtaaacatcatgtaaatttaggctcaactaagagtttgaagagagattacattccttctacatgtggtgatcattataaggataacacgaaggggaatgaagttccaaatcctagcccattaacaaaagatgggcctaagaaacatgatagagatgagtgtgaagattataagaatctaaggcctactaagaaacggagacgatatattgtaaatgttgatgaagaggatgattatgatgacaaaaatcctatggatattaaagattcaaccaaagtcgctatgccaattgccgcagagtctatcaagagacagttctatcattgtatacaaccaattgatgaacctatctggaggtatatatcgttgatgtttcgtatttctctttgaagtatcattgtatatgtctttctttattctaatcttttggttttgtttatgtcaacagcggaatctttaagattgggggcaatgattatataccattctcagcacatctatcaactaaatcatgcaagaaagtgtgggatttgtcggtatcaataccttcaattgtccaagtgacaaagctttctaggtcagtggtctggcctaagagtttggaggcatcaagtcccacagatgacagcattggcttgtatttcttcccccctaaaatgaggtaccttacttttgcaattagttgcagtatcactatcccgtgctctatgtgaaatgtgaaattaatgtctcataactttcttctttcatatgtaataggctagataaaggcatggatcagctagttaaggaaatcgtggagaaggatatggccttatctgctgttattggtgaagctcagatgctaatgtttccttctacactattgcctgaaaaatatcgaagtatgcatcttgtcttatctctcttctagatcattttaacataaagctgaggtgaatcgctatagagcatcttatattattttctcaagtgccacctaattgctaggatgtaggctgcactacagtgttctttaaattattatttatttagacacttaaacttacaaaaaatgattgttgtcggtcgcccgatggaagggaaaagttatcgggctgttataccatccacagtcctgcctggcatgcatgcaagtcactgcctatgaagagaagcaggaagcaactaggaatcgggtgacgtcatcatgcatgcatgtagaactttttaagctaactttaaattgatttttttcttaaattacttatccaaatcatgatccgattgcaccattaaattcgttgcaattaaatcttcaaaacaagaccacacatggatatattccgacgaaaaaaatagtaattgaattatttttaaatgttgcacgatgttctaccaagtatatcggaattgtttcactcagtagatcgaaaatgtttcacttgtttaaatcgggtattgtttcaccttatataaaaacaatgttccagtaaatagcgaaatgtttcagtaaatagcgaaagaatgtttcagttcactgcaacatttgatccatacatagtgatacgttgtgagtacattaggtgaaacatttttcggtgaaacaaaaataaaccaatttcccttaatagggggtttcaaaatatgtgggttctttgttgcaaaggaatatttcgttcaatgcaatgttagatctataaatagtgaaacattgtgagtacattatgtgaaatatttttttgtggaacaaaaaaaatgaaacggatttccttaatagaaggttttcataatatgcgcgtgatttgttgcaacggcgtctaccataatatcaaaatctactgcaacatttgatccgtacataatgaaatatcacgagtacacgcgtaaaactactggttgaaacatcaaaagagaccatatgcaacattcaaaaaaatatcaataaaaagctaaaatatttttttgtcgaaatataatcatgtgtggtcttgttgtaaagatttaattgtaacaaatttagtggtacaatcggattatgaattggataagtaacttgagagaaaaaatagtttgaagtttgtaaaaaaacctgtaaccatcctactattgtttagtgctactctacgaatgcatggtttcttctgatgcagtggcttgcatctacgtggtggcagtaaaaaaggtagaggaggaggcgcccgattttttaattaaaatattgggcgtccgatctgtagatggatccttaaacttataaaaagggatgtataaaattagttgagaatatgaaagatggaaacattaattatgcacgtacatgagtgacagtagcctaggcaacatagctcctttctgattgattattagtcataaaagttcagcttagggcctgtttagttggtgaaatgaacatttttttggtgtaacatcaaacgtttgactggatgtcggaaggggttttcggacacgaatgaaaaaactaatttcataactcgcctggaaaccgcgagacgaatcttttgaacctaattaagccatcattagcatatgtgggttactgtaagcacttattactaattatggactaattaggctcaaaagattcgtctcgcgatttacatgtaaactgtgcaattagtttttctttttatctctatttaatgctctatacatgtgcccaaatatttgatgtgatgtttttgcgaaaagtttttggaactaaagagggctttacttaattatttttgggtcagctttcctcgtatgtgcaacaaaactgaccatcctactctcttatttctctgcagcttttcaagggaagcactacctctggggagtatttaaacgtagaggaggagacgagcaacaagctgcagccatggcggctgagcagcagcgtggttcagatcagcgtgtcaagcaggagcaagagaacacacagtttcagggtgacgagacacagcaacggatcaagaaaccaaacagtaacctgcaggaaacggcagtgatcaagcagcagccgtcgtcgccgtcctcgtcgtcggtgacggctgcccacattggcgtggacgtagtgcaggagaagagcacggcagctagcggagggcgtcctgctgtgcctgcagggagccatggaagggtgatcggcttggtggtccggcaaactccgggggtggaggagctgatccagcagatgcggcgcggaggcgcgctgctggctaccatggagggggagatgatgggaggttttgaagcaaacgacgacgacggcgcgaagaaattcaagatggtggagtgacgcccttccttgggagtggttttacggctcttgagcaggtactcggaatacaccacacacactatctagtgataatttgtggtagatcctaataccttagagcactaagatatactcctttcgttttaaaaagaatcaatgctagttattaacctagactaagtactggtccaggtttatagctagatataggaattggtttattttttatggagggagtatgagttctctggttctatggatttattggaagcacgcggacattcgatcgtgttagcgtgtgcacaagattattctaaaggctccaaaattgccaatatcattaaattcaattttctagtttagttttaaaccatgtaagagtctgtttcatcttttcttgaactcctattttagacctcacgccatgtaagagtgtttaactttttttaactcatagcccctttatactgtctt</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0161500, RefSeq:Os12g0161500