BGIOSGA026426

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Revision as of 06:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026426| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026426, complete gene.| tag = OsI_273...")
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Gene Name

BGIOSGA026426

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026426, complete gene.

LocusTag

OsI_27395

Ensembl Transcript ID

BGIOSGA026426-TA

Ensembl Protein ID

BGIOSGA026426-PA

Length

2947

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27293279..27296225

Sequence Coding Region

27293279..27293467,27293624..27293686,27293821..27293892,27294035..27294142,27294239..27294319
,27294442..27294495,27294580..27294705,27294787..27294876,27295069..27295191
,27295292..27295402,27295552..27295665,27295839..27295895,27295975..27296049
,27296151..27296225

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27293279..27296225 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27293279..27296225 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTATAAGGCTAAAAGGACTGCTGCCCAGAAAGTAAGGCGCTGCCTTGGAAAATATGAGCTTGGACGCGCAATTGGTCAAGGAACTTTTGCAAAGGTTAGGTTTGCAAAGAACATGGAGACTGGTGATCATGTTGCTATTAAGATCCTTGACAAAGCGAAGGTTCAGAAGCACAGATTAGTCGAACAGATTAGACGGGAAATTTGTACGATGAAGTTGATACAACACCCCAATGTTGTTCACCTGCATGAGGTGATGGGAAGTAAAACAAGGATTTTCATTGTTCTAGAATATGTGATGGGAGGAGAGCTCCATGATATTATTGCCACAAGTGGAAGGTTGAAGGAGGATGAAGCACGGAAATACTTTCAGCAACTGATCAACGCCGTAGATTACTGCCACAGTAGGGGTGTATACCACAGAGACCTGAAGTTAGAGAATTTGTTGCTTGATACTGCCGGGAACATCAAAGTCTCGGACTTTGGCCTAAGTGCTATATCTGAGCAAGTGAAGGCTGATGGATTACTACATACTACATGTGGAACACCTAATTATGTTGCTCCTGAGGTTATTGAAGATAAGGGCTACGATGGTGCTCTTGCAGACCTTTGGTCATGTGGAGTAATTCTTTTTGTGCTGCTTGCAGGATATCTTCCTTTTGAGGATGAAAATATTGTCTCCCTTTATAACAAGATTTCTGGAGCTCAGTTTACTTGTCCCTCTTGGTTTTCTGCTGAAGCTAAGAGGCTCATTGCTAGAATTCTGGATCCAAATCCTGCTACTCGGATAACTACTTCTCAAGTGCTACAAGATCAATGGTTCAAAAAAGGCTATGAGTCCCCTGTTTTCGATGACAAATATTACCCTTATTTCCACGATGTTTATGATGCTTTTGGAGACTCAGAAGAAAAACATGTGAAAGAGGCTATGGAAGAGCAGCCAACCTTGATGAATGCCTTTGAGTTGATTTCACTAAATAAGGGTCTGAATCTAGACAATTTTTTTGAGTCTGATAAGAAGTACAAGAGAGAGACAAGATTTACATCGCAGTGCCCTCCGAAAGAAATCATCAATAGGATCGAAGAAGCTGCTAACTTACTAGGATTTAATATTCAGAAGAGAAACTACAGGATGAGAATGGAGAATATAAAGGAAGGAAGAAAAGGACATCTAAACATTGCAACTGAGGTTTTCCAAGTGGCACCATCCTTACATGTGGTTGAGCTCAAAAAGGCCAAGGGAGATACCCTGGAGTTTCAAAAGTTCTACCAAACGCTCTCGACGCAACTAAAAGATGTTGTTTGGGAATTAGAAGATGCGGCTGAGGATATGAGCTAA</cdnaseq>

Protein Sequence

<aaseq>MYKAKRTAAQKVRRCLGKYELGRAIGQGTFAKVRFAKNMETGDHVAIKILDKAKVQKHRLVEQIRREICTMKLIQHPNVVHLHEVMGSKTRIFIVLEYVMGGELHDIIATSGRLKEDEARKYFQQLINAVDYCHSRGVYHRDLKLENLLLDTAGNIKVSDFGLSAISEQVKADGLLHTTCGTPNYVAPEVIEDKGYDGALADLWSCGVILFVLLAGYLPFEDENIVSLYNKISGAQFTCPSWFSAEAKRLIARILDPNPATRITTSQVLQDQWFKKGYESPVFDDKYYPYFHDVYDAFGDSEEKHVKEAMEEQPTLMNAFELISLNKGLNLDNFFESDKKYKRETRFTSQCPPKEIINRIEEAANLLGFNIQKRNYRMRMENIKEGRKGHLNIATEVFQVAPSLHVVELKKAKGDTLEFQKFYQTLSTQLKDVVWELEDAAEDMS</aaseq>

Gene Sequence

<dnaseqindica>1..189#346..408#543..614#757..864#961..1041#1164..1217#1302..1427#1509..1598#1791..1913#2014..2124#2274..2387#2561..2617#2697..2771#2873..2947#ATGTATAAGGCTAAAAGGACTGCTGCCCAGAAAGTAAGGCGCTGCCTTGGAAAATATGAGCTTGGACGCGCAATTGGTCAAGGAACTTTTGCAAAGGTTAGGTTTGCAAAGAACATGGAGACTGGTGATCATGTTGCTATTAAGATCCTTGACAAAGCGAAGGTTCAGAAGCACAGATTAGTCGAACAGGTTATTTTCAGAGTCAGATAATTACTCACAATATTTTGTTCTACTTTCCTAGATTTTTCGCAACAACGAAAATAGCCAAAAGTATCTAGAAAAAAAATATTCCTGTGTACGCGCCAGCTGTGCTCATGCCACTCTAAAGTCTAAACTCTATTGCAGATTAGACGGGAAATTTGTACGATGAAGTTGATACAACACCCCAATGTTGTTCACCTGCATGAGGTAAATCTAAAGCATGAGAGACAAGAATATATCTTTCATTATTACCATGTTGCTAGTTTGAAACTTTGTGCAGTAGTACACCCAAGCCTTCTGTTTATGATAACTTGGATTACTTTTGTGGTGTTTTATAACAGGTGATGGGAAGTAAAACAAGGATTTTCATTGTTCTAGAATATGTGATGGGAGGAGAGCTCCATGATATTATTGTTAGTACTATTATACCTCTGAGGCTCTGATCCCCTGTATGACATTTTTCCATTGCAGTATCTGTAATTGAAGTAATCTCCACTTACTTTTTTTTTGCATGACAATTAAGTGAATTTCAATAACTTCATAAATTATAACCAGGCCACAAGTGGAAGGTTGAAGGAGGATGAAGCACGGAAATACTTTCAGCAACTGATCAACGCCGTAGATTACTGCCACAGTAGGGGTGTATACCACAGAGACCTGAAGGTCTAGTGTTAACCCCATTGCTCTGGTTTATAAGTTATAACTATGATCTGGCATAAACAATTGGAAATTGACAAATTGATGTTTTATGCATGACAGTTAGAGAATTTGTTGCTTGATACTGCCGGGAACATCAAAGTCTCGGACTTTGGCCTAAGTGCTATATCTGAGCAAGTGAAGGTAATATCACACAACTACTCGAAAGTTAAAAAAAAAAGGTTCCTGCACATCTATATTGTTTCTATGTCGATTGATTGCCTTTTTTACTGTGTGTGTGTGTCAATTAACTTCAACTCTGTCAGGCTGATGGATTACTACATACTACATGTGGAACACCTAATTATGTTGCTCCTGAGGTAACATTTGCTTGTACAACTTCTCTTATTTTTCTTTATCCAGAAATGAGTTTCTCCTATAATAAATATCTTTCTGTTTTGTAGGTTATTGAAGATAAGGGCTACGATGGTGCTCTTGCAGACCTTTGGTCATGTGGAGTAATTCTTTTTGTGCTGCTTGCAGGATATCTTCCTTTTGAGGATGAAAATATTGTCTCCCTTTATAACAAGGTAAATTTAGAAATTTAACCAAATCTTGAACACCAATATACCAGGTTATGATACATTTTTTTTTTGTCATTCCGATGACAGATTTCTGGAGCTCAGTTTACTTGTCCCTCTTGGTTTTCTGCTGAAGCTAAGAGGCTCATTGCTAGAATTCTGGATCCAAATCCTGCTACTGTAAGTTTTTTGACACTTACAAAATGTGGATAGAAGCTCTTACAGAAGTGACATTTTGAAGTTTGTTTAAACTTTAAATCTTTTATTTTTTATCACTGATTGTACTGACTAGATAAAGTTGCAATTTGGATCAGTAATCAGTGCCCAAAATTACTTGTTTCTTCTTACTTGGTTTTCTTTGTTGCCAACCAGCGGATAACTACTTCTCAAGTGCTACAAGATCAATGGTTCAAAAAAGGCTATGAGTCCCCTGTTTTCGATGACAAATATTACCCTTATTTCCACGATGTTTATGATGCTTTTGGAGACTCAGAAGTGAGTTAATTAATCAATAGTATTATATCTACAAGGGTACTTATCCTTTTGTGCTTCAGATGTTCATAATCTTAAATATACCGTCTAATAAATTTGCCAGGAAAAACATGTGAAAGAGGCTATGGAAGAGCAGCCAACCTTGATGAATGCCTTTGAGTTGATTTCACTAAATAAGGGTCTGAATCTAGACAATTTTTTTGAGTCTGATAAGGTAAGGATCTTTTCTGATTGCAGCAGTATGGTTAATGAGCCAGTGGGCAGTGGGATCAAATATGCACGTATCATAAACATTTTTCATAAATTACTTCAGAAACTATGCAATTATTGCAGTGGACTCACTTTTTTATTTAAACATGACAGAAGTACAAGAGAGAGACAAGATTTACATCGCAGTGCCCTCCGAAAGAAATCATCAATAGGATCGAAGAAGCTGCTAACTTACTAGGATTTAATATTCAGAAGAGAAACTACAGGGTATGCTAAGAATCCTTGCAAGTAATGTTTCTCTTACTAGTACCACTTTCAGCTCATTTGTACAAACTATGAAGAAGTTGAATATCACAATGTGAGATTACCTTTATCACCCCTGCGCTGCGTCCTGAACCATGACAAGCATCTCACTCGTTTTTTTCTACTGTTCTATTTAGATGAGAATGGAGAATATAAAGGAAGGAAGAAAAGGACATCTAAACATTGCAACTGAGGTATAGAAAACACAAAATTAAAGAAGATATCTGTCACAAGAAACATGAGGATTGATCAAAATATTATCCCGCTGTATAGGTTTTCCAAGTGGCACCATCCTTACATGTGGTTGAGCTCAAAAAGGCCAAGGGAGATACCCTGGAGTTTCAAAAGGTATATGTCTATCAATGGGGTTACTCTTATTATGGTCAATTGATCACCTTCAGTTTTGTTTAAATGACAAAGTAACTGAGCAAAATTATTACTATGAACAGTTCTACCAAACGCTCTCGACGCAACTAAAAGATGTTGTTTGGGAATTAGAAGATGCGGCTGAGGATATGAGCTAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026426