BGIOSGA026442

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Revision as of 06:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026442| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026442, complete gene.| tag = P0034A0...")
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Gene Name

BGIOSGA026442

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026442, complete gene.

LocusTag

P0034A04.123

Ensembl Transcript ID

BGIOSGA026442-TA

Ensembl Protein ID

BGIOSGA026442-PA

Length

4368

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27592253..27596620

Sequence Coding Region

27592253..27592517,27592783..27593000,27593102..27593896,27593971..27594839,27595082..27595514
,27596024..27596620

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27592253..27596620 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27592253..27596620 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGGTGCTTACGGTTTCTGCGCAGGGGCTTGCTCTCCATGCTTCCCACCAACAAGAGAGCCGCCGGCACGGACGACGACCGCCCCACCGACCCCAAGAGACCCAAGGTCGCCCAAAACGGGAGCACGAATGGAGTGGTGGTGCCGGAGATTGACGAGGACCTGCACAGCAGGCAGCTCGCCGTCTACGGGAGGGAGACCATGCGCCGCCTCTTCGCCTCCCATGTCCTCGTCTCTGGCCTCAATGGCCTCGGTGCAGAGATTGCCAAGAACCTTGCTCTTGCTGGGGTCAAGTCCGTCACCCTACATGATGTGAAAAACGTTGAGATGTGGGATTTGTCTGCCAATTTCTTTTTATCTGAAAATGATATTGGCAAAAACAGGGCTGCTGCTTGTGTATCCAAGCTGCAAGAGCTCAACAATGCTGTTCTTATCTCTGCTCTAACAGAGGAACTGACCACAGACCACCTGTCTAAATTCCTGGCTGTTGTTTTCACCGATATAGGTTTAGACAAGGCCTACGAATTTGATGACTACTGTCACAGCCACTGCCCTCCTATTTCCTTCATCAAAGCTGAAGTTTGTGGTCTCTTTGGTACTGTCTTTTGTGACTTTGGACCAGAGTTTACCGTTCTTGATGTTGATGGTGAAGACCCACATACTGGTATAATTGCATCCATCAGCAATGACAACCCTGCGTTGGTGTCCTGTGTTGATGATGAACGGCTTGAGTTTCAGGACGGTGATTTTGTGGTTTTCTCTGAGGTCCATGGTATGGCTGAGTTAAATGATGGAAAACCAAGGAAGGTTAAAAATGCAAGGCCATTTTCATTTTGCATTGAGGAAGATACAACTAAATATGACATGTATATAAAAGGTGGAATCGTTACACAGATCAAGGAGCCAAAGATACTACGATTCAAGTCACTAAGAGATGCTATGAGAGATCCTGGAGATTTCCTTCTGAGTGACTTCTCTAAGTTTGAACGTTCCCCCGTGCTTCACCTAGCATTTCAAGCTCTGGATAAGTTTAAGAAAGAATATGGACGCTACCCTGCTCCTGGTTGTGAGCAGGATGCTCAAAGTTTCCTTAAGTGTGCTGCTGATATTAACGAAGCCTTAACTGATCACAAGCTGGATACAATTGATGAGAAGTTATTCAGACATTTCGCAAGTGGTTCTCGAGCTGTTTTGAACCCTATGGCTGCAATGTTTGGTGGTATTGTTGGTCAAGAAGTTGTGAAGGCATGTTCAGGAAAATTCCATCCTCTCTACCAGTTCTTCTACTTTGATTCTGTCGAATCCCTGCCAACGTATCCACTTGACTCTGAAGACATCAAACCGTCAAACAGCCGCTATGATGCTCAGATCTCTGTATTTGGTTCCAAACTTCAGAAGAAACTGGAAGAGGCAAATACTTTTGTTGTGGGGTCTGGTGCCCTTGGATGTGAATTTTTGAAGAACCTTGCTTTAATGGGAGTGTCTTGCAGCCCTAAGGGAAAGCTAACTATAACAGATGATGATGTCATTGAGAAAAGTAATTTAAGCCGCCAATTTCTGTTCCGTGACTGGAATATCAGGCAGGCAAAGTCTACTGTGGCCGCTGCAGCTGCCAGTGCTATCAACCCCAACCTCTGTATTGATGCTCTCCAGAACCGTGCTTGTCCAGATACAGAGAATGTGTTCCATGACACGTTCTGGGAGGGTTTAGATGTTGTCATCAATGCGCTTGATAATGTTAATGCCAGGATGTATATGGACATGAGATGCCTGTACTTCCAGAAGGCATTGTTGGAGTCAGGAACATTGGGTGCAAAGTGCAATACGCAAATGGTGATTCCTCACCTTACTGAAAATTATGGGGCTTCAAGAGATCCTCCAGAGAAGCAGGCACCAATGTGCACAGTCCATTCTTTTCCGCACAATATTGATCATTGCTTGACTTGGGCACGCTCTGAGTTTGAGGGTTTGCTAGAGAAGACACCAGGTGAAGTAAATTCATTTCTCTCTAATCCGGCTCAATATGCTGCTGCCATGAGGAAGGCAGGTGATGCCCAAGCTAGAGAATTGCTCGAGCGTGTTTCTGAATGTCTTGGCAAAGAGCGTTGCAGTTTGTTTGAGGATTGCATAAGATGGGCCAGACTGAAATTTGAGGACTATTTCTCAAACCGTGTGAAGCAGCTCACATTTACCTTTCCTGAAGATGCTGCCACTAGTACGGGTGCTCCTTTCTGGTCTGCCCCCAAGCGCTTCCCTCGCCCACTGCAATTTTCAGTCTCTGATCCCTCCCACATTCACTTTATTATGTCTGCTTCAATACTGAGAGCTGAGTCATTTGGAATTGCTATACCGGACTGGGCAAAGAACACAAGTAAGCTGGCTGATGCAGTAAGTGAAGTTGCTGTTCCTCAATTTGAGCCAAAGAAAGGGGTCAGTATTGTGACAGATGAGAAAGCTACTAGCCTTTCCAGTGCCTCAGTTGATGATGCTAGTGTTATTGATGACCTTCTTGCTAAGTTGGAAGAATGTGCCAAGAGGTTACCTCCAGGATTCCAAATGAAACCTATCCAATTTGAGAAGGATGATGACACCAACTTTCACATGGATCTGATCTCTGGATTTGCAAATATGCGCGCAAGGAACTACAGCATTCCAGAGGTTGACAAATTGAAGGCTAAGTTCATTGCTGGAAGAATCATCCCAGCTATTGCAACTTCAACAGCGATGGCGACAGGACTGGTCTGTCTTGAGCTATACAAGGTTATTGCTGGCGAGCACCCCATTGAAGACTACCGCAATACATTTGCGAACCTGGCACTGCCACTATTCTCAATGGCTGAACCTGTTCCACCCAAGGTGATGAAGCATCAAGACATGAGCTGGACTGTATGGGACAGATGGTCCATCAAGGGCAATCTGACTGTTGCTGAGCTCCTGCAATGGTTCAGCGACAAGGGCCTTACCGCTTACAGCATTTCCTGTGGCACTTCGCTGCTGTACAACAACATGTTCGCAAGACACAAGGAGAGATTGAACAAGAAGGTGGTAGACGTGGCCAGAGAAGTCGCCAAGGTGGATGTTCCTGAATACAGGAAGCATTTGGATCTTGTGGCGGCCTGCGAGGATGATGATGGAAACGACATCGATATTCCTCTTGTCTCAGTTTACTTCCGATAG</cdnaseq>

Protein Sequence

<aaseq>MRCLRFLRRGLLSMLPTNKRAAGTDDDRPTDPKRPKVAQNGSTNGVVVPEIDEDLHSRQLAVYGRETMRRLFASHVLVSGLNGLGAEIAKNLALAGVKSVTLHDVKNVEMWDLSANFFLSENDIGKNRAAACVSKLQELNNAVLISALTEELTTDHLSKFLAVVFTDIGLDKAYEFDDYCHSHCPPISFIKAEVCGLFGTVFCDFGPEFTVLDVDGEDPHTGIIASISNDNPALVSCVDDERLEFQDGDFVVFSEVHGMAELNDGKPRKVKNARPFSFCIEEDTTKYDMYIKGGIVTQIKEPKILRFKSLRDAMRDPGDFLLSDFSKFERSPVLHLAFQALDKFKKEYGRYPAPGCEQDAQSFLKCAADINEALTDHKLDTIDEKLFRHFASGSRAVLNPMAAMFGGIVGQEVVKACSGKFHPLYQFFYFDSVESLPTYPLDSEDIKPSNSRYDAQISVFGSKLQKKLEEANTFVVGSGALGCEFLKNLALMGVSCSPKGKLTITDDDVIEKSNLSRQFLFRDWNIRQAKSTVAAAAASAINPNLCIDALQNRACPDTENVFHDTFWEGLDVVINALDNVNARMYMDMRCLYFQKALLESGTLGAKCNTQMVIPHLTENYGASRDPPEKQAPMCTVHSFPHNIDHCLTWARSEFEGLLEKTPGEVNSFLSNPAQYAAAMRKAGDAQARELLERVSECLGKERCSLFEDCIRWARLKFEDYFSNRVKQLTFTFPEDAATSTGAPFWSAPKRFPRPLQFSVSDPSHIHFIMSASILRAESFGIAIPDWAKNTSKLADAVSEVAVPQFEPKKGVSIVTDEKATSLSSASVDDASVIDDLLAKLEECAKRLPPGFQMKPIQFEKDDDTNFHMDLISGFANMRARNYSIPEVDKLKAKFIAGRIIPAIATSTAMATGLVCLELYKVIAGEHPIEDYRNTFANLALPLFSMAEPVPPKVMKHQDMSWTVWDRWSIKGNLTVAELLQWFSDKGLTAYSISCGTSLLYNNMFARHKERLNKKVVDVAREVAKVDVPEYRKHLDLVAACEDDDGNDIDIPLVSVYFR</aaseq>

Gene Sequence

<dnaseqindica>1..265#531..748#850..1644#1719..2587#2830..3262#3772..4368#ATGAGGTGCTTACGGTTTCTGCGCAGGGGCTTGCTCTCCATGCTTCCCACCAACAAGAGAGCCGCCGGCACGGACGACGACCGCCCCACCGACCCCAAGAGACCCAAGGTCGCCCAAAACGGGAGCACGAATGGAGTGGTGGTGCCGGAGATTGACGAGGACCTGCACAGCAGGCAGCTCGCCGTCTACGGGAGGGAGACCATGCGCCGCCTCTTCGCCTCCCATGTCCTCGTCTCTGGCCTCAATGGCCTCGGTGCAGAGATTGGTTCGTCTTTCTATCCACTCACTCTGTTCGTCCTCTGTTTCTTTCTGTTCCAGATTGCTTTCAACTGTCTCCTCATCACAAGTATGCAACATGGATTCGATTCTATAGCAAAATCATGTCCCCGCATCATTTTTTTTCCGATTTTAACATGTATTCCGTAGAATGGATTCGATTGTAACTTGTTTATGCTACCTTACTTCAGTTTCATATATTGCCAACAATATGCAACTCTCGTGTATTAAACAAATGTGTTGCGTTCCTGCAGCCAAGAACCTTGCTCTTGCTGGGGTCAAGTCCGTCACCCTACATGATGTGAAAAACGTTGAGATGTGGGATTTGTCTGCCAATTTCTTTTTATCTGAAAATGATATTGGCAAAAACAGGGCTGCTGCTTGTGTATCCAAGCTGCAAGAGCTCAACAATGCTGTTCTTATCTCTGCTCTAACAGAGGAACTGACCACAGACCACCTGTCTAAATTCCTGGTTTGTTGCACTTGCAGTATCTTGCCATATGATGAATGGTCACATATATTCCATGCATCTCTGATATGCCTGTCTAACCCATAGTTTTATCTGGATGGCAGGCTGTTGTTTTCACCGATATAGGTTTAGACAAGGCCTACGAATTTGATGACTACTGTCACAGCCACTGCCCTCCTATTTCCTTCATCAAAGCTGAAGTTTGTGGTCTCTTTGGTACTGTCTTTTGTGACTTTGGACCAGAGTTTACCGTTCTTGATGTTGATGGTGAAGACCCACATACTGGTATAATTGCATCCATCAGCAATGACAACCCTGCGTTGGTGTCCTGTGTTGATGATGAACGGCTTGAGTTTCAGGACGGTGATTTTGTGGTTTTCTCTGAGGTCCATGGTATGGCTGAGTTAAATGATGGAAAACCAAGGAAGGTTAAAAATGCAAGGCCATTTTCATTTTGCATTGAGGAAGATACAACTAAATATGACATGTATATAAAAGGTGGAATCGTTACACAGATCAAGGAGCCAAAGATACTACGATTCAAGTCACTAAGAGATGCTATGAGAGATCCTGGAGATTTCCTTCTGAGTGACTTCTCTAAGTTTGAACGTTCCCCCGTGCTTCACCTAGCATTTCAAGCTCTGGATAAGTTTAAGAAAGAATATGGACGCTACCCTGCTCCTGGTTGTGAGCAGGATGCTCAAAGTTTCCTTAAGTGTGCTGCTGATATTAACGAAGCCTTAACTGATCACAAGCTGGATACAATTGATGAGAAGTTATTCAGACATTTCGCAAGTGGTTCTCGAGCTGTTTTGAACCCTATGGCTGCAATGTTTGGTGGTATTGTTGGTCAAGAAGTTGTGAAGGCATGTTCAGGAAAATTCCATCCTCTCTACCAGGTTTGTGTTATGACTCATCTGTTGCTTTTATGATAATCCATTGACCCTGTCTGATAGAACTCAATTTTATGTAGTTCTTCTACTTTGATTCTGTCGAATCCCTGCCAACGTATCCACTTGACTCTGAAGACATCAAACCGTCAAACAGCCGCTATGATGCTCAGATCTCTGTATTTGGTTCCAAACTTCAGAAGAAACTGGAAGAGGCAAATACTTTTGTTGTGGGGTCTGGTGCCCTTGGATGTGAATTTTTGAAGAACCTTGCTTTAATGGGAGTGTCTTGCAGCCCTAAGGGAAAGCTAACTATAACAGATGATGATGTCATTGAGAAAAGTAATTTAAGCCGCCAATTTCTGTTCCGTGACTGGAATATCAGGCAGGCAAAGTCTACTGTGGCCGCTGCAGCTGCCAGTGCTATCAACCCCAACCTCTGTATTGATGCTCTCCAGAACCGTGCTTGTCCAGATACAGAGAATGTGTTCCATGACACGTTCTGGGAGGGTTTAGATGTTGTCATCAATGCGCTTGATAATGTTAATGCCAGGATGTATATGGACATGAGATGCCTGTACTTCCAGAAGGCATTGTTGGAGTCAGGAACATTGGGTGCAAAGTGCAATACGCAAATGGTGATTCCTCACCTTACTGAAAATTATGGGGCTTCAAGAGATCCTCCAGAGAAGCAGGCACCAATGTGCACAGTCCATTCTTTTCCGCACAATATTGATCATTGCTTGACTTGGGCACGCTCTGAGTTTGAGGGTTTGCTAGAGAAGACACCAGGTGAAGTAAATTCATTTCTCTCTAATCCGGCTCAATATGCTGCTGCCATGAGGAAGGCAGGTGATGCCCAAGCTAGAGAATTGCTCGAGCGTGTTTCTGAATGTCTTGGCAAAGAGCGTTGCAGTTTGTTTGAGGATTGCATAAGATGGGCCAGACTGAAGTATGTCTCTCCTGCTTGCCATTGCTATATTATTTTTATTATATTTTTGTTGGCCCTTTCTTCTTGACAAGAAAGATTAGTTTAGCCCACTATTAATAAATTGTCTGAGTTAGTCCTTTGCACTGTTAAATCAGCTTTTGTGTTTCCTGTGAAGACTAGTACAGTTAAGGCTGGTGCAATTTTATGGCTCCGTTTTCCCTTTTCACAAGTTGAAAATTTTCCTTTTGTTTTGTTCTTGGCAGATTTGAGGACTATTTCTCAAACCGTGTGAAGCAGCTCACATTTACCTTTCCTGAAGATGCTGCCACTAGTACGGGTGCTCCTTTCTGGTCTGCCCCCAAGCGCTTCCCTCGCCCACTGCAATTTTCAGTCTCTGATCCCTCCCACATTCACTTTATTATGTCTGCTTCAATACTGAGAGCTGAGTCATTTGGAATTGCTATACCGGACTGGGCAAAGAACACAAGTAAGCTGGCTGATGCAGTAAGTGAAGTTGCTGTTCCTCAATTTGAGCCAAAGAAAGGGGTCAGTATTGTGACAGATGAGAAAGCTACTAGCCTTTCCAGTGCCTCAGTTGATGATGCTAGTGTTATTGATGACCTTCTTGCTAAGTTGGAAGAATGTGCCAAGAGGTTACCTCCAGGATTCCAAATGAAACCTATCCAATTTGAGAAGGTTAGTATTTTAAGTACAAGTTTCTGCAAGTCTAGGTTTAAGATACTTGTTGATATATATCCACCTAGTTCAATATAGTTCAAGTGTCCCTAGTTACACTGGATCTGTTGTTTTTCCACTTCCTTGCTGATGTTTGATATATCGACGTACCACATCTCTAGTCACTTGTAATGCATGGCTTGTACTTATTACCATCGTTAGTAGTTAGCACAATATTTCAAATCATGGCTTCTGTACTTTGGAGATGTATGTATGTTAGTACAATCTGGTGAATCGTGAGGATATGTATTTGGTTATTAGCTCCTTGTTCTTCCTTAGAATGACATATTAGGAAATTTTCTTCCTCTTGGTTGGCTGTGTAGCTTCTGTTGTCCATATGCATACAACAGAAATTCCTATTTCCTTGAACATGAAAGCTGATATACTAGCAATGTTGTGTCGAATGTTGCCACCCTCAAAAACTACTGGTGCATGAGCTATTTGATATTAAATTTCGCTTGCTTTTACAGGATGATGACACCAACTTTCACATGGATCTGATCTCTGGATTTGCAAATATGCGCGCAAGGAACTACAGCATTCCAGAGGTTGACAAATTGAAGGCTAAGTTCATTGCTGGAAGAATCATCCCAGCTATTGCAACTTCAACAGCGATGGCGACAGGACTGGTCTGTCTTGAGCTATACAAGGTTATTGCTGGCGAGCACCCCATTGAAGACTACCGCAATACATTTGCGAACCTGGCACTGCCACTATTCTCAATGGCTGAACCTGTTCCACCCAAGGTGATGAAGCATCAAGACATGAGCTGGACTGTATGGGACAGATGGTCCATCAAGGGCAATCTGACTGTTGCTGAGCTCCTGCAATGGTTCAGCGACAAGGGCCTTACCGCTTACAGCATTTCCTGTGGCACTTCGCTGCTGTACAACAACATGTTCGCAAGACACAAGGAGAGATTGAACAAGAAGGTGGTAGACGTGGCCAGAGAAGTCGCCAAGGTGGATGTTCCTGAATACAGGAAGCATTTGGATCTTGTGGCGGCCTGCGAGGATGATGATGGAAACGACATCGATATTCCTCTTGTCTCAGTTTACTTCCGATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026442