BGIOSGA026443

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Revision as of 06:44, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA026443| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA026443, complete gene.| tag = P0034A0...")
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Gene Name

BGIOSGA026443

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA026443, complete gene.

LocusTag

P0034A04.124

Ensembl Transcript ID

BGIOSGA026443-TA

Ensembl Protein ID

BGIOSGA026443-PA

Length

2323

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 7

Location

Chromosome 7:27597854..27600176

Sequence Coding Region

27597854..27597941,27598038..27598077,27598368..27598828,27598921..27599111,27599251..27599383
,27599587..27600176

Genome Context

<gbrowseImage1> name=IndicaChromosome07:27597854..27600176 source=RiceIndica07 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome07:27597854..27600176 source=RiceIndica07 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGCGCTGCCTTTGCTTCGCCTGCTGCTGCTGCTTGTGCTATCATCGGTTCCTCTCTCTTGCCAGCTCGCCCACTCTACTGCTGCAGACACACAGAATTGGGGACAGACCTCTGTTGTTCATCTTAGGAATGCACATACTAGAAAATTACTTGGCCTATTGGACGATATCAGTGGTAGAACTGGAAGCCTACATGCTCTTCTTCTCGAGGAGTCACCTAAACAAGCTCCTCCTCATCATCACAATAGGCACGGGGGGCATCACAGAGCAGCACATACACCAGCACCATCGCCTGCACCATCCCCTTCTCCATTCACTGCTCCACCTAAATCAGCCTCACCTGCTGCCATAACAATCCCCATATCTCCTTCAACCCCACAGCCAAAGGCAGAGAGTAATCCTGCTGTTGAAGATGCTCCGGCTCAACCTAGGCATTCCTGGAGAAACTACGGTTTGGTCACAGCAGGAAGTGCAGTTTTCCTTGTCATGACAATAGCATCTGTTATTTACTGTCGAGCTAAGAAAGTCGGAACTGTCAGACCTTGGGCCACGGGGTTAAGCGGGCAATTGCAACGAGCATTTGTCACAGGTGTACCTTCATTGAAACGGTCTGAGCTGGAAGCAGCATGTGAGGATTTCAGCAATATAATTGGTTCTACATCTAGTTGCATGTTGTACAAGGGAACTTTATCAAGTGGAGTTGAAATAGCAGTTTTGACAAGTTCAACAGAATCCGGGAAGGAATGGTCAAAAGAATGCGAGTCACAGTACAGAAAAAAGATCACAAATTTATCCAAAGTTAGCCATAAGAACTTTATGAATCTGCTCGGCTATTGTGAAGAAGAGAATCCTTTTACCAGAGCTATGGTGTTTGAGTATGCTCCAAACGGGACACTTTTTGAGTATCTCCATGTCAGGGAAGCTGAGAACTTGGACTGGATGGCACGGGTTAGGATATCGATGGGAATAGCTTACTGTCTAGAGCACATGCATCAGCTGAACCCACCTGTTGTGCCAAGGAACTTCAACTCGACAACTATATACCTGACTGATGATTTCGCTGCAAAGGTTTCAGATCTTGATTTCTGGAACGACAGTAAGGGATCCTTCAATTCTGCTACTTCTGATGAAACCGTCATGGTGGAGATAGATAGCATGGTGCATCAATATGGCATAATACTGCTGGAGATATTGACCGGAAGAGTTCCCTACTCTGAGTCAGATGGGCCACTGGAGCATTGGGCATCTGGTTACTTTGAAGGCAAGATGACTCTTGCAGAGCTGATTGACCCAAGCCTGGGATCATTCCCTGAAGACGCTGCGCGTGCATTGTGCGATGTGGCGAGGTGGTGCATTGAGCCAGAGCCGAGCAAGAGGCCGCTCATGTCACAGGTTGCAGGTCGGATGAAGGAGATCACCTCCCTGGGGCCTGAGGGAGCGACTCCAAAGGTGTCGCCGCTATGGTGGGCGGAGCTGGAGATCATGTCTGGCCAAGCTACCTAG</cdnaseq>

Protein Sequence

<aaseq>MALPLLRLLLLLVLSSVPLSCQLAHSTAADTQNWGQTSVVHLRNAHTRKLLGLLDDISGRTGSLHALLLEESPKQAPPHHHNRHGGHHRAAHTPAPSPAPSPSPFTAPPKSASPAAITIPISPSTPQPKAESNPAVEDAPAQPRHSWRNYGLVTAGSAVFLVMTIASVIYCRAKKVGTVRPWATGLSGQLQRAFVTGVPSLKRSELEAACEDFSNIIGSTSSCMLYKGTLSSGVEIAVLTSSTESGKEWSKECESQYRKKITNLSKVSHKNFMNLLGYCEEENPFTRAMVFEYAPNGTLFEYLHVREAENLDWMARVRISMGIAYCLEHMHQLNPPVVPRNFNSTTIYLTDDFAAKVSDLDFWNDSKGSFNSATSDETVMVEIDSMVHQYGIILLEILTGRVPYSESDGPLEHWASGYFEGKMTLAELIDPSLGSFPEDAARALCDVARWCIEPEPSKRPLMSQVAGRMKEITSLGPEGATPKVSPLWWAELEIMSGQAT</aaseq>

Gene Sequence

<dnaseqindica>1..88#185..224#515..975#1068..1258#1398..1530#1734..2323#ATGGCGCTGCCTTTGCTTCGCCTGCTGCTGCTGCTTGTGCTATCATCGGTTCCTCTCTCTTGCCAGCTCGCCCACTCTACTGCTGCAGGTTAATTGGTGCCCTTTTATTTCTTTCGTTTGGCCCCTTGGTTAATTCGGTTGTGCTGCTGATTATCCTCATTGTTTCTTGGGTTGATTTTTGCAGACACACAGAATTGGGGACAGACCTCTGTTGTTCATCTTAGGTGAGAATGTATTTACAGACTTTCTTTTTTTCTGCTGGGCAACACTGGCAATCTATTCTGGCATTAATCTCTCTCTCTTTCGCTACTTCTTGATTTGGTCGGCCATTCCATGTGGAATTTGTTTGTACGAATTTACGATTTATTTATTTATTTATTTTCGATTATCGAGATCGATGCCTGTGATCTACTTCATTACGATTTAGACAGCTTAATTTTACCGTGAAGAGGAGGCATACTAAAAAAGGAATTTCCTTTCTTTTGCTCTTGCTTCTTGTGATTTCAACTTTCAGGAATGCACATACTAGAAAATTACTTGGCCTATTGGACGATATCAGTGGTAGAACTGGAAGCCTACATGCTCTTCTTCTCGAGGAGTCACCTAAACAAGCTCCTCCTCATCATCACAATAGGCACGGGGGGCATCACAGAGCAGCACATACACCAGCACCATCGCCTGCACCATCCCCTTCTCCATTCACTGCTCCACCTAAATCAGCCTCACCTGCTGCCATAACAATCCCCATATCTCCTTCAACCCCACAGCCAAAGGCAGAGAGTAATCCTGCTGTTGAAGATGCTCCGGCTCAACCTAGGCATTCCTGGAGAAACTACGGTTTGGTCACAGCAGGAAGTGCAGTTTTCCTTGTCATGACAATAGCATCTGTTATTTACTGTCGAGCTAAGAAAGTCGGAACTGTCAGACCTTGGGCCACGGGGTTAAGCGGGCAATTGCAACGAGCATTTGTCACAGGTACACGCTTCCTCTACATGTATATTTTGTGTGTCTTATATCTAGTATTTCAGTTACACCTTACACCATGACCCATCAATCTTTTATCCCAGGTGTACCTTCATTGAAACGGTCTGAGCTGGAAGCAGCATGTGAGGATTTCAGCAATATAATTGGTTCTACATCTAGTTGCATGTTGTACAAGGGAACTTTATCAAGTGGAGTTGAAATAGCAGTTTTGACAAGTTCAACAGAATCCGGGAAGGAATGGTCAAAAGAATGCGAGTCACAGTACAGAAAAAAGGTAACATGTGCTCATAACTTTTAGGATATCCCCTAAAATACAAATATGTTTTCTGTGGTGCAAATGACTTTTCTCAGAAATGTGCGTATGCTTTTTCTCATCTTTACTGTGCGAATGGCTGAAATGGTTATGATTTCAGATCACAAATTTATCCAAAGTTAGCCATAAGAACTTTATGAATCTGCTCGGCTATTGTGAAGAAGAGAATCCTTTTACCAGAGCTATGGTGTTTGAGTATGCTCCAAACGGGACACTTTTTGAGTATCTCCATGGTAAGCCTGCCCCTGTTTACTAATCTGTTCCTTTTATTCCATGTCATTTCTTTGATTTTCTGTGAACAGGGTAATTCCTGTATCACATATATCGCTTCAAATATTATACTGGTAAAATCTGCGAATTTCGCACACTACAGAATGCAACCCCGTATGATTATTGATATGGCATTTTGACAATGCCTTTGATTGTGTTGCTGCAGTCAGGGAAGCTGAGAACTTGGACTGGATGGCACGGGTTAGGATATCGATGGGAATAGCTTACTGTCTAGAGCACATGCATCAGCTGAACCCACCTGTTGTGCCAAGGAACTTCAACTCGACAACTATATACCTGACTGATGATTTCGCTGCAAAGGTTTCAGATCTTGATTTCTGGAACGACAGTAAGGGATCCTTCAATTCTGCTACTTCTGATGAAACCGTCATGGTGGAGATAGATAGCATGGTGCATCAATATGGCATAATACTGCTGGAGATATTGACCGGAAGAGTTCCCTACTCTGAGTCAGATGGGCCACTGGAGCATTGGGCATCTGGTTACTTTGAAGGCAAGATGACTCTTGCAGAGCTGATTGACCCAAGCCTGGGATCATTCCCTGAAGACGCTGCGCGTGCATTGTGCGATGTGGCGAGGTGGTGCATTGAGCCAGAGCCGAGCAAGAGGCCGCTCATGTCACAGGTTGCAGGTCGGATGAAGGAGATCACCTCCCTGGGGCCTGAGGGAGCGACTCCAAAGGTGTCGCCGCTATGGTGGGCGGAGCTGGAGATCATGTCTGGCCAAGCTACCTAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA026443