Os12g0161900

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0161900| Description = Hypothetical protein| Version = NM_001072753.2 GI:297612719 GeneID:4351572| Length = 6482 bp| Definition = Oryza sa...")
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Gene Name

Os12g0161900

Description

Hypothetical protein

Version

NM_001072753.2 GI:297612719 GeneID:4351572

Length

6482 bp

Definition

Oryza sativa Japonica Group Os12g0161900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3117228..3123709

Sequence Coding Region

3118772..3119896

Expression

GEO Profiles:Os12g0161900

Genome Context

<gbrowseImage1> name=NC_008405:3117228..3123709 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3117228..3123709 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaatggtggtaatgatgactatgtcagtgatgacttgatgttggagagaaataaggaaagatttcagttgcatgacgaggcaaacaatgatatacacctgaaaagtatgtccgctaatgtgccccggtcttccactttgcatgaaaactctgtggcccgaaacgtatcatcctcagcaaatacagggctaccgatggatagcaattgtgtgccatctgcacacattgatattggaaatccaagagacagtagtgtgagactaatattaacaggggaaaatcgaagagaatcttcaatgctgctagatggggcttgttcaggttccttgtcaaaagactcgtcgaaagagaaaattgatcgtgaggccaattcttcccatatggaaccttctgatgctgtcaagaacttctgtaaggacaacccaatgaagcgaagaaaactcatgttattagatgatgatgatgatgatgtaggtgtggaactgtctgatactgttcaaaatgttgtcaaggacaacccaagcaaacgaagaaaactcattttacctgatgatgatgatgtagaggtggaactttgcaatactgttcaaagtattgcaaaggacaacccagggaagacaatacagcttattgtactagatgatgatgatgacaaacaagaggatgctgaaaatctgaatcacctatctcttgagtttgaaggaccaattgagaagcataaaatacacattggatatgccacagggcagagatgtttagaagatgatgaacatggactactggatagtttggatcaccggtctttggagaacacttgtcccacaaagaaacggaggagatacatatgtccaagtgacgatgaagaagaagaggttattaaaggttctacgaccactggatgtgctccgaatgatgttgcaaatacagcttcacaacatgtagatgccaaggaccaccatctgcagtccagaatggcatttgcttcagatttcaccaaacatcagtattatatttactcagagcctatgggtgagcctgcttggaggtatgtgatattctcctttttcctcttgagtaatatttatttgtttgcacaaaatgtgaatgatttttttttcttctag</cdnaseq>

Protein Sequence

<aaseq>MNGGNDDYVSDDLMLERNKERFQLHDEANNDIHLKSMSANVPRS STLHENSVARNVSSSANTGLPMDSNCVPSAHIDIGNPRDSSVRLILTGENRRESSMLL DGACSGSLSKDSSKEKIDREANSSHMEPSDAVKNFCKDNPMKRRKLMLLDDDDDDVGV ELSDTVQNVVKDNPSKRRKLILPDDDDVEVELCNTVQSIAKDNPGKTIQLIVLDDDDD KQEDAENLNHLSLEFEGPIEKHKIHIGYATGQRCLEDDEHGLLDSLDHRSLENTCPTK KRRRYICPSDDEEEEVIKGSTTTGCAPNDVANTASQHVDAKDHHLQSRMAFASDFTKH QYYIYSEPMGEPAWRYVIFSFFLLSNIYLFAQNVNDFFFF</aaseq>

Gene Sequence

<dnaseqindica>3814..4938#ggagcggatttcgcggctgcagaatctctcttcttgcaccgcgggcgggggcgttctgttctgttcttgggttcgttgattaggagagattgaggaggagatggagatttagatgggatgagacgggtttattggggcctccattggttggattccgattctgttttcttggagagatcttcggtttcggatttcggaatccatctgaggtgcagggctggaaccggttctttttcttggtgattcttttggcgtcgcagaacaaagtgctggaaaatggtaatgctttttctttttctttgtttaacaaaaaaaaaagaaaatctctttcatcccaatctcctcttgtttgcttttcttgggttctttgattgaggaaaattggccggtgtacagaaaatctatggaaaaagaaaagattggttcttgatggtcgatgatgtgcgcataggtttgaccaccattgtttcggttatatatccttcggtttgggtatcaggtaggccatgcggatggaaccgcttttctttcttggttagaaccgcgagcctttcttttctttcttttgagcacaagaatcgcgagctttctcatagggatggcagaatattctcttttttggagtaataacagaggaggattttcaaccaccccaaactttggcattttcaaattttggcaaggtagtaagctgaacacatcacaaatactctacggccttaccatgccaaattttggtgattttctagaaacttttccacataacactatacaagaatatttggcatggtggcaaacaaacaacacccatacacttttatcctaccaaaatttggcattaccaaactttgccaaattttagtgtcaccaaaatttggaagttttaattttggcatcaaagtgagcaaacccgaaatctaggtgaaatggccattgtgagattccaaattgaaacaaatggtaggacagtgcacactgtctgttgaatggttaccataccttcccaccttcagttcacctcgacttcctcattgacggttattttcattgtttttgcatatttttattgattttgtgcatatcactactaaattatcccttccttgtcaaattacttgtcttttgttttgtcctaagtgaaacatttctaactttgaccatcgatttctaacaaaaattgagtaaatttcatttcgggccatattttactaccaatgtttcacttaggaccaccttttaaccattgtttttactttggatcaccccgattttcttctcgagcatatgaacaatctcgagtatgtttcctactcgtcaattaactctcacagtcacagctataagttcgatgtggatggataaaagagttgagtgtggtccaaagtgccacaaaggtgaaaataccctgtccaaagtgaaaacattggtgaaatggtggtctaaagcgaaacattggtaataaaagatggcccaaagtgaaatttatgtttttcaattcaccatgagaaatattttcataatatataattcacatgttaaaccatatgaatttttagaaattgatggtcaaagttacaaatgtttgattagaacaaagctgaaacgaggattaagtttgaaatggatggagtacttacaataaaccctatgtatgttttttactccctccgtttcacaatgtaagtcattctagcatttcccatatcatattgatgttaatgaatttagataatatatatgtctagattcattaacataaatatgaatgtgggaaatattagaatgacttacattgtgaaacggaggaagtatttattttattttttaaaaaagcctaagcatgcctaagttgagttcagagtggcaaaactatggagtataaacattattgttagaaaacgatagatgaacagtgaaaacagtgaatcccttcaagttttattgatctcaatatgtccccttttatagtgaggatttgtatgtatacaagcctgtgattctcctagtatttaagggagatttaagccactaaatatggctgattatatgtcacaaatacaccataatatggctgttacaagtcacttgattcctgccattgttgctctttgatgagcctttgatgagatcaaatatgcctcatgatgcttttgtaacaattatgcctagttggtttgtaatcgaagccattcattggtgcaatggtattgaatatggtgcttacacagatacaccttttcatcattcatgaatcatcttccaatttgtagtggggagcgtcacattaaccaatgacagagcttatttaatttacttttacttaaaatctggatgtggcatagttgtgttgttgtggcatggtaagggcgaggtgtattcgttacagatggaaagggttttcaaaccaagttgtttttagtattgggaagggagaaatgggacataagaagtagccaatgagatgacatggctgtagacctcagccatggcactttgtccagactgtggcgccgtaacagtatagatgaggcttttgtgctcatgctgtacagatttgacaaaatgcttcctttatcactttttaatcattagcccaatctgtttatcttgagataattagccaatgctaactaagtcctttagagtatcgagatatcttgttaattcctgcaccaccagtgaaaatatctggcttatgctttgtttgcattgactactgtcgccgaatgcctgcccctcttttgatgccagtggcagctatggagctgtatgtgtcattaggtgaaatgagattgaatgaaacagatcggcagtcaagcaacaatgcatgagataacatgataagtaaaaaaaaacacatatcacaagtctgacaaatattttcaaacttctgtcttttcagtatcctgcctaatattggattgttaatagttaattggttgtgtatctttgattcatacactattacctaaagatgatcattgactgtcttcaatttactatatgatgcctactgtcagtggtgatactttctgattacctgcttaagagatggtttttccaaatttttttttggcattatgcagattactgtatgcgaagtttgtggagttcttggttacaaaaatcttctgctatcttgcaaaaactgcaacggagctgctgtgcaccggtatgttctcaaactaaatatagcatgtagcacaaatgcttagttgatgaatgtgatagttgtttttaatgatgatttaattcgatgaccgtagactggatcatcacacagtctctttttgttttttacagtcattttcaaatttttacaccaagtttattttgcatgtgaatgtcaaacaactgttgtctgctaaatgttagtattttctctatttgaacatggcagagcacttgttttgagttttctttactcgaaatataagttttcttttgagcgaattttaatttctatgtaatgatgtacctaataataagtttgttttcttaatggaaaagtttttgttaactacataagttgtgatattgttcatgtataattgttttgccattacttatttaattgtcattttatctttctaataatgattttttcctttgtgtggttctaaattttgtagatactgtctggacaaagttgattttgatgggacagtagattggtcatgtgatgaatgccatcctaggcatggcaaaggtactaatagaagatctttagaagtgactttagatgataaaacagtggttggcaagcagccagaaaatcagtcatcactggataccaaccacgacaagcctgggatgaatggtggtaatgatgactatgtcagtgatgacttgatgttggagagaaataaggaaagatttcagttgcatgacgaggcaaacaatgatatacacctgaaaagtatgtccgctaatgtgccccggtcttccactttgcatgaaaactctgtggcccgaaacgtatcatcctcagcaaatacagggctaccgatggatagcaattgtgtgccatctgcacacattgatattggaaatccaagagacagtagtgtgagactaatattaacaggggaaaatcgaagagaatcttcaatgctgctagatggggcttgttcaggttccttgtcaaaagactcgtcgaaagagaaaattgatcgtgaggccaattcttcccatatggaaccttctgatgctgtcaagaacttctgtaaggacaacccaatgaagcgaagaaaactcatgttattagatgatgatgatgatgatgtaggtgtggaactgtctgatactgttcaaaatgttgtcaaggacaacccaagcaaacgaagaaaactcattttacctgatgatgatgatgtagaggtggaactttgcaatactgttcaaagtattgcaaaggacaacccagggaagacaatacagcttattgtactagatgatgatgatgacaaacaagaggatgctgaaaatctgaatcacctatctcttgagtttgaaggaccaattgagaagcataaaatacacattggatatgccacagggcagagatgtttagaagatgatgaacatggactactggatagtttggatcaccggtctttggagaacacttgtcccacaaagaaacggaggagatacatatgtccaagtgacgatgaagaagaagaggttattaaaggttctacgaccactggatgtgctccgaatgatgttgcaaatacagcttcacaacatgtagatgccaaggaccaccatctgcagtccagaatggcatttgcttcagatttcaccaaacatcagtattatatttactcagagcctatgggtgagcctgcttggaggtatgtgatattctcctttttcctcttgagtaatatttatttgtttgcacaaaatgtgaatgatttttttttcttctagtggtatctttatgacagatagcaatgtgcctattatgttggctgcacacctatcaactaaagcatgccagagagtgtcggaatttgcaagatcgttgcaaccagtagttgaagtaatcaagctccctaggttgaaagcatggccagagaggtgggacaaatcaggacctactgacgacagcattgggttgtttttcttcccgcatagtatgaggtgtgtattatgttatgtttattcacttattttcctctgatctgagactaaaggtctaacacccttgtttcatctccaggccaaatgaagaattagataaactagtgaaagaagtaattgagagtgatgttgtcttaaaagctgttctaggaactgtggagctactaatcttcccctctattcttttaccagaacaatatcatggtaagtgcccacttggtgatttcttgcttctgcaaatgttatactagacatggcactgcacctagtgcccaaatcaggaagttcggtggagctaagcatggctattagttattgcttggaattattttcttgcaaaccagtgttactggggatgaagttttgttgtttcattctatatcataatacttttttactcgttttagcagttgatgaacaaaaattgtgtgatatttcagagttccaggggaaatactacctgtggggagtgtgcaaggccaggaaacataatcctgacacagctgttcttgttgaagaacaatgtggcttggtctctgcctcggaggaagggtcatcggacaaagaaagttatgtcatgaaacatgtcgaggatcgattgcctgcagactgtaacccggaggcacgggagggggacatcaaaactgctttgggagaaggttgtttctcacctgatagctgtttgtcaagtaataaggcaagccctgtgaagggtggatcaccatgctttatgcaaccaggacttggcgataaacctcatgagcctggtgtagcagaccagaaagaagatgagcaagacttcacctctttacctagaaggaatgatcaaaatgctaccaatccaccaatcgactctttaccttccgcgaccagactgtttggattcgttacagcacggtctgaaagatgtcagcaactcatccaggagatggtcaaggaaggtgctctcttattctcggtgccggaagatatgacgatcaatcgatctaccataagcaagagcaatggagtaggagcagctcaggcccctgacagtggctgtcaacatgtgcaggagcgttgtgaacccattgaattcgttccgattgatcacaatgaccccgactcggcttctgaagcctgcctggatctgttcccggttcggcatgagcagattggattgacttctcaggtagatgttaaagaagtagaactggacttgagccttggcgcatttcggcgagcaccttcagagctgccatgatgagcagctcctgtgattctggtgttttgctgaagttctggacagcctcaataattttgtctgtgaataaaaactgtagcgtttacgg</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0161900, RefSeq:Os12g0161900