BGIOSGA035748

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Revision as of 08:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035748| Description = Sucrose transport protein suc4| Definition = Oryza sativa Indica Group BGIOSGA035748, complete gene.| tag = | tid = ...")
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Gene Name

BGIOSGA035748

Description

Sucrose transport protein suc4

Definition

Oryza sativa Indica Group BGIOSGA035748, complete gene.

LocusTag

'

Ensembl Transcript ID

BGIOSGA035748-TA

Ensembl Protein ID

BGIOSGA035748-PA

Length

3611

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:23022250..23025860

Sequence Coding Region

23025356..23025860,23024455..23024499,23023437..23024164,23023292..23023355,23023177..23023220
,23022250..23022411

Genome Context

<gbrowseImage1> name=IndicaChromosome12:23022250..23025860 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:23022250..23025860 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGCCGCGGCGGCCTAGCGGCGGCGGCGGCGGCGCTGGTCCCGCGGCGGCCGCGGTGCGCAAGGTCCCCCTGCGGAAGCTTCTGCGTGCGGCGTCGGTGGCGTGCGGCGTGCAGTTCGGGTGGGCGCTGCAGCTCTCCCTGCTGACCCCCTACGTCCAGGAGCTCGGCATCCCGCACGCCTTCGCCAGCCTCGTCTGGCTCTGCGGCCCCCTCTCCGGCCTCCTCGTCCAGCCCCTCGTCGGCCACCTCTCCGACCGCATCGCCCCCGCCGCCTCCCCCCTCGGCCGCCGCCGCCCCTTCATCGCCGCCGGCGCCGCTTCCATCGCTGCCGCAGTCCTCACCGTCGGATTCTCCGCCGACCTCGGCCGAATCTTCGGCGATTCCATCACCCCGGGCTCCACCCGCCTCGGCGCCATCATCGTCTACCTCGTCGGCTTCTGGCTCCTCGACGTCGGCAACAACGCTACACAGGGACCCTGCAGGGCCTTCCTCGCCGACCTCACCGAAGGCATGATTGTGCTTTTTGTCATGGAAATGCTGGAGTTCCACGAGAATGACCCAAGGAGGACTCGGATAGCTAATGCTTACTTCTCATTGTTCATGGCCCTGGGAAACATACTTGGATATGCCACTGGAGCATACAGTGGCTGGTACAAGATATTCCCGTTCACCGTTACTCCATCATGTAGCATCAGCTGTGCCAACCTCAAGTCTGCCTTTCTACTTGATATTATCATTTTGGTGGTCACTACATGCATCACTGTAGCATCAGTGCAAGAGCCTCAATCCTTAGGAAGTGATGAAGCAGATCACCCTAGCACAGAACAGGAAGCTTTCCTCTGGGAACTTTTTGGATCATTCCGGTACTTTACATTACCGGTTTGGATGGTTTTGATTGTTACTGCCCTCACATGGATTGGATGGTTTCCATTTATCCTCTTTGATACCGATTGGATGGGTCGAGAGATCTATCGTGGAAGTCCAGATGATCCAAGTATAACTCAGAGCTATCATGATGGTGTGAGAATGGGTTCTTTTGGTCTGATGCTGAACTCGGTCCTTCTTGGATTCACTTCTATTGTACTAGAGAAGTTATGTCGGAAGTGGGGAGCTGGACTGGTGTGGGGTGTCTCCCAATATCCTAATGGCGTTGTGCTTTGTGGCATGCTTGTAATAACATATGTGGCAAGAATATGGATTATCCACCTAGTGGAGTACACCAACCGGCATGTCATTGCTTCCCTGGTAGTTTTTACAATTTTAGGAGCGCCCCTGGCGATCACGTACAGTATACCATATGCAATGGCTGCTAGTCGGGTTGAAAATCTGGGACTTGGCCAAGGTCTAGCAATGGGCATTCTTAATTTGGCTATTGTCATACCACAGGTTATTGTGTCACTGGGTAGCGGGCCCTGGGACCAACTGTTTGGTGGTGGCAATGCACCAGCCTTTGCAGTGGCTGCTGCTGCATCTTTTATCGGTGGGCTGGTGGCTATTCTGGGCCTTCCACGAGCCCGCATTGCATCAAGGAGGAGAGGTCACCGATAA</cdnaseq>

Protein Sequence

<aaseq>MPRRPSGGGGGAGPAAAAVRKVPLRKLLRAASVACGVQFGWALQLSLLTPYVQELGIPHAFASLVWLCGPLSGLLVQPLVGHLSDRIAPAASPLGRRRPFIAAGAASIAAAVLTVGFSADLGRIFGDSITPGSTRLGAIIVYLVGFWLLDVGNNATQGPCRAFLADLTEGMIVLFVMEMLEFHENDPRRTRIANAYFSLFMALGNILGYATGAYSGWYKIFPFTVTPSCSISCANLKSAFLLDIIILVVTTCITVASVQEPQSLGSDEADHPSTEQEAFLWELFGSFRYFTLPVWMVLIVTALTWIGWFPFILFDTDWMGREIYRGSPDDPSITQSYHDGVRMGSFGLMLNSVLLGFTSIVLEKLCRKWGAGLVWGVSQYPNGVVLCGMLVITYVARIWIIHLVEYTNRHVIASLVVFTILGAPLAITYSIPYAMAASRVENLGLGQGLAMGILNLAIVIPQVIVSLGSGPWDQLFGGGNAPAFAVAAAASFIGGLVAILGLPRARIASRRRGHR</aaseq>

Gene Sequence

<dnaseqindica>1..505#1362..1406#1697..2424#2506..2569#2641..2684#3450..3611#ATGCCGCGGCGGCCTAGCGGCGGCGGCGGCGGCGCTGGTCCCGCGGCGGCCGCGGTGCGCAAGGTCCCCCTGCGGAAGCTTCTGCGTGCGGCGTCGGTGGCGTGCGGCGTGCAGTTCGGGTGGGCGCTGCAGCTCTCCCTGCTGACCCCCTACGTCCAGGAGCTCGGCATCCCGCACGCCTTCGCCAGCCTCGTCTGGCTCTGCGGCCCCCTCTCCGGCCTCCTCGTCCAGCCCCTCGTCGGCCACCTCTCCGACCGCATCGCCCCCGCCGCCTCCCCCCTCGGCCGCCGCCGCCCCTTCATCGCCGCCGGCGCCGCTTCCATCGCTGCCGCAGTCCTCACCGTCGGATTCTCCGCCGACCTCGGCCGAATCTTCGGCGATTCCATCACCCCGGGCTCCACCCGCCTCGGCGCCATCATCGTCTACCTCGTCGGCTTCTGGCTCCTCGACGTCGGCAACAACGCTACACAGGGACCCTGCAGGGCCTTCCTCGCCGACCTCACCGGTATCTATCTACCCTACCTACCATCGATTGCTTGATTGATTGCTAGCTTGCTTGCTTCCCAACTTCGCATCGAACAGCCAAGAGGAATTGGAATTGGACCTCGCTTCCGCCACAAGCTTTTTCGATTCCGTCCAATTGCGAAACGTAGGACCAAACTTCAAAACAATTTCCTCTTTTTCTTTTTTTTTCTTATGTGGCTGTATGTGTGGCTGTGTGTGGACACAACACAACAGCAGCCTGCCTCTGCGTATCGCTTTCCCCTTTAGCCTGCCTGCCTGAGATTCTTGCTCCGATGGATGCTGGTCGGCGTAACTCATTTTGCTTGTCTCCCTAAAAATTATATTATATATTTCCTCTTCATTTGTTTATTTATTTTACGGCCATGGTTTTTTGTTTGCCCTGCCAGCTGGCCTATTATTAGCATCAGGGTTAGGCGAGCTGGACAACACGAACCACAAAACGACATGACAACTCATTACACAATGCATATATTTGAATAATTAGGGTTGGTACAAATGTCGCACCAATTGTTTTTTTTTTTTCATTTCTTCCTTGTAGTTTTTTTTTTCTCATTTCTTCCTTGTTTACACGGAGTATTCGATGGTTGTGGGAGGGGGAGGTCAAGGGATCGCTTTCTGACTGAGATAGGAATATAGAAAGGAAGATATTTGAGTGTTACAGTACCCCTGTAAGTTTGGAATCATAGGAGGAGAAAGAGCATCTTTTGTCAACAGACAGGGCTATTGTCTGAGGGGCCCTGGTTAAATAATTGCAAGGCTGGCAGTGGTTTGTAGCTGTGGTCTTTGTTATGCCTTTGCATTCTATGGGAAACACCTGATGCAAACATTACATTCAGAAGGCATGATTGTGCTTTTTGTCATGGAAATGCTGGAGTTCCACGGTAAATTGGTGATAAAATTGATATGATTGTAATATTACTCCATGATCTTCTGTTTAGGCAGTCAAATTCAGCTGGCACGATCTCCATTATCCAATGCATGTGGATATGTGCATACAAGAGCTTTTCAGATATTCTTAACTTGTAGTTGCACATGCCTGTCCTCAAATTTTTCCCAGTAATGTTTACACCAATAACCCATCTGTGCAATGTAACGTGTTCAAAAGGCATCGTAATTGCATTAGCATTTTTCCACACCTCGTAAATGCTCATTCTGATCTTTTCTATTTCAGAGAATGACCCAAGGAGGACTCGGATAGCTAATGCTTACTTCTCATTGTTCATGGCCCTGGGAAACATACTTGGATATGCCACTGGAGCATACAGTGGCTGGTACAAGATATTCCCGTTCACCGTTACTCCATCATGTAGCATCAGCTGTGCCAACCTCAAGTCTGCCTTTCTACTTGATATTATCATTTTGGTGGTCACTACATGCATCACTGTAGCATCAGTGCAAGAGCCTCAATCCTTAGGAAGTGATGAAGCAGATCACCCTAGCACAGAACAGGAAGCTTTCCTCTGGGAACTTTTTGGATCATTCCGGTACTTTACATTACCGGTTTGGATGGTTTTGATTGTTACTGCCCTCACATGGATTGGATGGTTTCCATTTATCCTCTTTGATACCGATTGGATGGGTCGAGAGATCTATCGTGGAAGTCCAGATGATCCAAGTATAACTCAGAGCTATCATGATGGTGTGAGAATGGGTTCTTTTGGTCTGATGCTGAACTCGGTCCTTCTTGGATTCACTTCTATTGTACTAGAGAAGTTATGTCGGAAGTGGGGAGCTGGACTGGTGTGGGGTGTCTCCCAATATCCTAATGGCGTTGTGCTTTGTGGCATGCTTGTAATAACATATGTGGCAAGAATATGGATTATCCACCTAGTGGAGTACACCAACCGGCATGTCATTGCTTCCCTGGTAGTTTTTACAATTTTAGGAGCGCCCCTGGCGGTGAGTAACAATTTTTTCCCTCCAGAGTTTCTTCAAGTTCTCACTGGTGTATGGTATCCTTATTAATTCTTGTTATTGCAGATCACGTACAGTATACCATATGCAATGGCTGCTAGTCGGGTTGAAAATCTGGGACTTGGCCAAGGTACTGTTCCTTTTGAGTCAATGCTATCATTTTGGGTTCCTGTACTTAGGAAGTCTTTGTTTCACATGCAGGTCTAGCAATGGGCATTCTTAATTTGGCTATTGTCATACCACAGGTATGTATTTCTTGCCTTTTTTTCTCTTTGTTTTAGAGTTTGATTCGTTCAAACATATGACTGTAACACAGTACAATTATGAATATTGACATGATTGCTGTATCCTAAAATAACCTGTTGATGGTGGAAACTTACTTAATTCATGGCTCAACCACAGTTATCAGACACAATTTAAGAAATGGTTTAATGGTTAATTGTAAGCTATGACCTGCCGTCGACCATGTCAAAACAACCATATACTGCATAATTTACTAAGTAGGATAACTAGTCATACTGGTACAAGTAAATTTGTTATGAAAAACAATGCTTTCACAGTATTGTGCTGACCTCCGAAATCATTTACTTTCGTGCTAACTTTGTTAAGGCACAATGAATATAATTTAGTAGTCATGGTGTTATCTTATTGACTTCGAGAATCAAAAGCCAATTTACTTGAGTGAAAGTGTGAACTCAGGAATAATTGTGTTATGTAAGCTAGATACATTTTGTGAGCTACAGCATGAGAAATCATTCTCTTACAAATTTAGTATACTGTGAGTGCCATCATGGTAGTTGAAATTTAAAAGGTTGAAACCCTGATGGAAGATTACAAGTTCAGGATTGGCACAATTTGCCCTGATTTACGGGCTACAGAATATATAAGGAGGGATTTAGTAGTTGGATGTCAACCATTCGCTTGTTGCTACTACAAAGCTTCCATGCTATTCCAGAAAATTACTTTCATACATTAGGTTATCGTGCATGTACTGACACTGGTACATTCAGGTTATTGTGTCACTGGGTAGCGGGCCCTGGGACCAACTGTTTGGTGGTGGCAATGCACCAGCCTTTGCAGTGGCTGCTGCTGCATCTTTTATCGGTGGGCTGGTGGCTATTCTGGGCCTTCCACGAGCCCGCATTGCATCAAGGAGGAGAGGTCACCGATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035748