BGIOSGA035750

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Revision as of 08:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035750| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035750, complete gene.| tag = OS12G06...")
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Gene Name

BGIOSGA035750

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035750, complete gene.

LocusTag

OS12G0640800

Ensembl Transcript ID

BGIOSGA035750-TA

Ensembl Protein ID

BGIOSGA035750-PA

Length

4157

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22990662..22994818

Sequence Coding Region

22994551..22994818,22994048..22994456,22993781..22993962,22993452..22993675,22993290..22993358
,22992419..22992491,22992143..22992299,22991764..22992055,22991403..22991517
,22991134..22991297,22990934..22991008,22990662..22990850

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22990662..22994818 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22990662..22994818 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAGCACCGCAAATCGTATCCTAAAGATTCACATTCCAAAGAGCAGTCTAGAAGATCCCCTTCAAGGCACCATAGCAGTCAAGATCATGCCAGGCATCACTCAAGGTCTAGAGATACTGGTGCTGAAGCTAATGGTTCGCGGGCAAGTACAAGGGAAGATTCTGACCGTGACAGCAACGGCAGAAATAGTAAGCATGGTAGGCATGCAACCAGGAGTCGAGATAATGAGACAGAAAGGAGCAGCAGCTATGCTGTTCGTGATGAGGCGGATAGAGAAAGGAGCAGCAGTCGCAGTAGATCTGATCGTAGGGAGAGCGCACATCACATTCGTGATGAAAGCAGGAAGAGCGAAAAGGCGGAGTAGTAGTTCAAGGCATGAAGATAATGAGAGAAGGGATAGAAGTAAGGATCGCTATAAAGAATCTGACAAGGTTGACAGTGGACATGAAAGGGACAAAACAAGAGATGATAGAGACAGGGGACGACATAAGGATTTGGAAAGTAGAAAGCGGAGAAATGGAGAAGCAAAGGACAGGGATGACAGGCACAAGGATTCTACACGCTCAAAATACAGTACTTCTGATAGTCATAAACACCGCTCAAGATCCAGGGAGAGAGGTAGAGATGCTGAACGTAGAGGCCAGAGATCTGAAGAGCTGAAGGAGAATACTTTCAGGGAGGAGGATGAAGAGGAGTACCAAGAGAAAATTGAACAGCAGTTAGCAATGCAGGAAGAAGAGGACCCTGAAAAAATTAAGGAGGAAGCAAGGAGGAGGAAAGAAGCTATTATGGCAAAATACAGGCAGCAACAATTGCAGAAGCAGCAGCTGGAATCTTTACCTAGAAGTAATGATGAAGAAGAAGTGGAAATGAACAGAGGTGATAATGCAGATTTGAAAGGTGATAACGATAGCAGATTTGTGGCTAGCGAGGAAGCTGAAAATAAGCATGATTCTTCAGATGCAATTGTTGGTGAAACAGACTTCACTGTGGGAAAGTCTCCTGCTCACAATGATGGTGCAGGAACTTTGGGTAATCAGAGAACAACTGGTGTTTCAGGTCTTGGAGAGGGCACTCCAAAGAGTGAGAGATCGGCGGATATGTTTTGTGATGACATTTTTGGAGAATCACCTGCTGGCATCCGGAAATTGGGCAAGGATGATGGTTTGCGCATCGAGAAAAATGCTCTTCATGACAACTGGGATGATGCCGAGGGGTACTATACTTACCGTTTTGGGGAATTGCTGGATGGGCGCTATGAGATTACAGCAGCACATGGAAAGGGAGTGTTTTCAACAGTTGTCCGAGCAAAAGATCTTAAAGCTGGGAAGGATGATCCCGAAGAGCTTGCTATTAAGATTATTCGCAACAATGAGACAATGTACAAGGCTGGTAAGCAAGAGGTTTCAATATTAGAAAAACTGGCAAGTGCGGATCGTGAAGACAAGCGCCACTGCGTGCGGTTTATTTCTAGTTTCATGTATAGGAACCATCTTTGCTTAGTTTTTGAATCTCTAAATATGAATCTTCGTGAGGTACTAAAGAAATTTGGTCGCAATATCGGACTTAAACTAACTGCTGTGAGGGCATATTCAAAGCAGCTTTTCATCGCCCTGAAGCATCTGAAAAACTGCAAAGTGCTGCACTGTGATATAAAGCCGGATAATATGCTGGTGAATGAGGCTAAGAATGTGCTGAAGCTCTGTGATTTTGGCAATGCAATGCTTGCTGGAATGAACGAGGTTACACCTTATCTTGTGAGCCGTTTCTATCGTGCACCTGAGATAATTCTTGGGTTACCCTACGACCACCCATTAGACATGTGGTCAGTTGGCTGCTGTCTATATGAACTTTACACCGGAAAAGTCCTATTTCCAGGTCCATCAAATAATGACATGCTTCGGCTTCATATGGAACTGAAGGGCCCCTTCCCCAAGAAAATGCTTCGAAAGGGTGCCTTTACGATGCAACATTTTGACCAAGATCTCAACTTTCATGCCACTGAGGAGGATCCTGTGACCAAAAAGGCTGTGACAAGGATGATTTTGAACATTAAGCCAAAGGATATTGGTTCCTTGATTTCAAACTTCCCTGGCGAGGATCCAAAAATGCTATCCAACTTTAAAGATCTTCTTGATAAAATATTTGTCTTAGATCCAGAAAAGAGGATAACCATATCACAAGCACTTAGCCATCCATTTATCACTGGCAAGTGA</cdnaseq>

Protein Sequence

<aaseq>MSTANRILKIHIPKSSLEDPLQGTIAVKIMPGITQGLEILVLKLMVRGQVQGKILTVTATAEIVSMVGMQPGVEIMRQKGAAAMLFVMRRIEKGAAVAVDLIVGRAHITFVMKAGRAKRRSSSSRHEDNERRDRSKDRYKESDKVDSGHERDKTRDDRDRGRHKDLESRKRRNGEAKDRDDRHKDSTRSKYSTSDSHKHRSRSRERGRDAERRGQRSEELKENTFREEDEEEYQEKIEQQLAMQEEEDPEKIKEEARRRKEAIMAKYRQQQLQKQQLESLPRSNDEEEVEMNRGDNADLKGDNDSRFVASEEAENKHDSSDAIVGETDFTVGKSPAHNDGAGTLGNQRTTGVSGLGEGTPKSERSADMFCDDIFGESPAGIRKLGKDDGLRIEKNALHDNWDDAEGYYTYRFGELLDGRYEITAAHGKGVFSTVVRAKDLKAGKDDPEELAIKIIRNNETMYKAGKQEVSILEKLASADREDKRHCVRFISSFMYRNHLCLVFESLNMNLREVLKKFGRNIGLKLTAVRAYSKQLFIALKHLKNCKVLHCDIKPDNMLVNEAKNVLKLCDFGNAMLAGMNEVTPYLVSRFYRAPEIILGLPYDHPLDMWSVGCCLYELYTGKVLFPGPSNNDMLRLHMELKGPFPKKMLRKGAFTMQHFDQDLNFHATEEDPVTKKAVTRMILNIKPKDIGSLISNFPGEDPKMLSNFKDLLDKIFVLDPEKRITISQALSHPFITGK</aaseq>

Gene Sequence

<dnaseqindica>1..268#363..771#857..1038#1144..1367#1461..1529#2328..2400#2520..2676#2764..3055#3302..3416#3522..3685#3811..3885#3969..4157#ATGAGCACCGCAAATCGTATCCTAAAGATTCACATTCCAAAGAGCAGTCTAGAAGATCCCCTTCAAGGCACCATAGCAGTCAAGATCATGCCAGGCATCACTCAAGGTCTAGAGATACTGGTGCTGAAGCTAATGGTTCGCGGGCAAGTACAAGGGAAGATTCTGACCGTGACAGCAACGGCAGAAATAGTAAGCATGGTAGGCATGCAACCAGGAGTCGAGATAATGAGACAGAAAGGAGCAGCAGCTATGCTGTTCGTGATGAGGCGTATGATGAGCGGGAAAGATATAAGCATGAAAGAAGGCATAGAAGCAAGCCCAGTTGATAGAGACAAAGTGGATTTGCATGAACTAACTCACAGGGATAGAGAAAGGAGCAGCAGTCGCAGTAGATCTGATCGTAGGGAGAGCGCACATCACATTCGTGATGAAAGCAGGAAGAGCGAAAAGGCGGAGTAGTAGTTCAAGGCATGAAGATAATGAGAGAAGGGATAGAAGTAAGGATCGCTATAAAGAATCTGACAAGGTTGACAGTGGACATGAAAGGGACAAAACAAGAGATGATAGAGACAGGGGACGACATAAGGATTTGGAAAGTAGAAAGCGGAGAAATGGAGAAGCAAAGGACAGGGATGACAGGCACAAGGATTCTACACGCTCAAAATACAGTACTTCTGATAGTCATAAACACCGCTCAAGATCCAGGGAGAGAGGTAGAGATGCTGAACGTAGAGGCCAGAGATCTGAAGAGCTGAAGGAGAATACTTTCAGGTAAAGCTTCTTTCACATGATTTACTATCTTTCCTTTTGACACTTCATAAGTTCATAGTTCATATTGCTGTTTTTATGATGTTAGGGAGGAGGATGAAGAGGAGTACCAAGAGAAAATTGAACAGCAGTTAGCAATGCAGGAAGAAGAGGACCCTGAAAAAATTAAGGAGGAAGCAAGGAGGAGGAAAGAAGCTATTATGGCAAAATACAGGCAGCAACAATTGCAGAAGCAGCAGCTGGAATCTTTACCTAGAAGTAATGATGAAGGTAACTTGAATATCCAAAATTGACAGAATATAAAATTATTATGTGTAATATTCTATTCCTAAATGAATTTATTCCATACTGACTATCTTACCTGTGCCTGTACAGAAGAAGTGGAAATGAACAGAGGTGATAATGCAGATTTGAAAGGTGATAACGATAGCAGATTTGTGGCTAGCGAGGAAGCTGAAAATAAGCATGATTCTTCAGATGCAATTGTTGGTGAAACAGACTTCACTGTGGGAAAGTCTCCTGCTCACAATGATGGTGCAGGAACTTTGGGTAATCAGAGAACAACTGGTGTTTCAGGTCTTGGAGAGGGCACTCCAAAGGTAATTCTGTTCTCTTACCCTGTTGTTCAACTTTAAGTTATTTAAATCTGGCCAGGCCATCCAGAAATTTTATGTTCCCCTTTCTATTTTCAGAGTGAGAGATCGGCGGATATGTTTTGTGATGACATTTTTGGAGAATCACCTGCTGGCATCCGGAAATTGGTAGGCTTCTTTTTTCCTTATGTAATCTGTAAGTGTATCTAAGCTGCAACAGATTAGGACTGATGAATGGTGGAGATGGCATGTTCTAAGTGCATTACTGAAGATGGCAAACTACCCCCTTCTTAGGACTAGTAATGTGTCTAGAAAAATAGTCTAGCATCCTGTGCCAATAGCATCATCATGCTGTAGAGAAAATAGGAATAACAAATCAGTCACCACACTAAAGAAGATACCAAAGCACTTCCACATACATGATTCTTCCAAACCTTGGTCAAAATCTTACCATACTTGGATAGCAGAGACAATAAAGTCAATTTGTGACCATCTAATGTTGAAACATAAAAACCATATAAATTTCCAAGATTGACAGATTGTCTCACTATATACAATCCCAGTACATTAAGAAAGAAGCCCTCCAGATTTAATTATGAGGAGATCCATCCCTCAATATAAATTATGGACATGTTTAGACTAAGAACTGATCGAGTGAATGGCTGGTTAATAGATTTATTAAAATCAGGGAAGGAAAGAAATGAAATCCATGGGAGTGATCAAGCAGCTGGACCAAAGAGGGGTGCAGGCACAAAGAGCATTCACTATGAAGTGATCCATCTTGCACTATGAATTTGCTACACTATATTTGAGGCTATTGATCAAATGGACAGGATTGATATGTGTATATTTCTATGGGTGTTCATAGAAAATACTAGAACTGATCCTTTCTATGTTAGTAGAATATTCCAATATTAGAGATATACATGACCTGTTTACTCAGTGTTTGAATATTATGCCGTGCAGGGCAAGGATGATGGTTTGCGCATCGAGAAAAATGCTCTTCATGACAACTGGGATGATGCCGAGGGGTACTATAGTAAGTTCCACCATATGCTAACCTTCTCCCTTTTAGTTTTCTTTTGTTAACTGTGGTCAACAAACTATTCTTTGCTGTGTCCATTTGTTTCCATTCCTAACTTATGCAAAACTTTGCAGCTTACCGTTTTGGGGAATTGCTGGATGGGCGCTATGAGATTACAGCAGCACATGGAAAGGGAGTGTTTTCAACAGTTGTCCGAGCAAAAGATCTTAAAGCTGGGAAGGATGATCCCGAAGAGCTTGCTATTAAGATTATTCGCAACAATGAGACAATGTGAGTTAAGCTTCCTAGAAGTATTTTTGGTTTACTTGTAGCATGGAACATGTACATGACCCTTTTATTTGATATTTGATTATACAGGTACAAGGCTGGTAAGCAAGAGGTTTCAATATTAGAAAAACTGGCAAGTGCGGATCGTGAAGACAAGCGCCACTGCGTGCGGTTTATTTCTAGTTTCATGTATAGGAACCATCTTTGCTTAGTTTTTGAATCTCTAAATATGAATCTTCGTGAGGTACTAAAGAAATTTGGTCGCAATATCGGACTTAAACTAACTGCTGTGAGGGCATATTCAAAGCAGCTTTTCATCGCCCTGAAGCATCTGAAAAACTGCAAAGTGCTGCACTGTGATATAAAGCCGGATAATATGCTGGTATGATATCTGGCTTGCCATACTTCTTTTCTTACACTAGCATTTGCTCTTGTTTTTTGGCCATTCGGTTTTGTAGAAGTTTTGTCACTATCTACATAAAAAAAACCGCTATCTGGAACATGGCAATTTTGATTCCTGTGGATATTGAACATGCTTGAATATTTTTATTTATGCTTGTTATATACTGCAGTCATTGTATCTACAGTAAACATCCTTTTTAATTTTTTTTGTCTTGATATTCTTTAGGTGAATGAGGCTAAGAATGTGCTGAAGCTCTGTGATTTTGGCAATGCAATGCTTGCTGGAATGAACGAGGTTACACCTTATCTTGTGAGCCGTTTCTATCGTGCACCTGAGATAAGTGAGTTCCTTTTCTCGCACTTCATTTTGTTGTGTATTCAATATTCTTCCTACTGTTATTCTGTCTCCATACTACATGTGGTCTGATGCACAATTTTTCTTGCAGTTCTTGGGTTACCCTACGACCACCCATTAGACATGTGGTCAGTTGGCTGCTGTCTATATGAACTTTACACCGGAAAAGTCCTATTTCCAGGTCCATCAAATAATGACATGCTTCGGCTTCATATGGAACTGAAGGGCCCCTTCCCCAAGAAAATGCTTCGAAAGGTTCTTCATCATTTTCAAATCTCTTCTTACCTTCAAGGAAACAATCTACTTTTGATATTTACATCTGCAACAGTTGCTAAGTGAATATACAAATACTTTCTAAGGAATTGTTCCCAATTTTGCAGGGTGCCTTTACGATGCAACATTTTGACCAAGATCTCAACTTTCATGCCACTGAGGAGGATCCTGTGACCAAAAAGGTGTCTATGCAACCATGTTCTCAAATACTCTGTTTGAGTGCATTGTTATGGATTATCTTAACTTATTCTTCTTTTTCTTGCAGGCTGTGACAAGGATGATTTTGAACATTAAGCCAAAGGATATTGGTTCCTTGATTTCAAACTTCCCTGGCGAGGATCCAAAAATGCTATCCAACTTTAAAGATCTTCTTGATAAAATATTTGTCTTAGATCCAGAAAAGAGGATAACCATATCACAAGCACTTAGCCATCCATTTATCACTGGCAAGTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035750