BGIOSGA035769

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Revision as of 08:09, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035769| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035769, complete gene.| tag = OsI_392...")
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Gene Name

BGIOSGA035769

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035769, complete gene.

LocusTag

OsI_39253

Ensembl Transcript ID

BGIOSGA035769-TA

Ensembl Protein ID

BGIOSGA035769-PA

Length

5024

Source

Oryza sativa Indica Group 

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22768839..22773862

Sequence Coding Region

22773811..22773862,22773637..22773708,22773312..22773476,22773045..22773179,22772761..22772840
,22772169..22772226,22771887..22772026,22771545..22771634,22771289..22771405
,22770421..22770573,22769828..22769929,22769140..22769310,22768961..22769040
,22768839..22768863

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22768839..22773862 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22768839..22773862 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGGACGGCATCATGTCGCTGCCCGACCTCTTCGAGAAGCTTCTCGGCGACGATCAGGACAGCTGGCCCGCGGAGGCCAACTTGCTCCTCGCCGCCCACGACGGCAACCTCCGCCGCATCAAGGAGATCGCCGCGACGCTGGACGACGACGGGGAGGGGATCGCGGCCACCGTGGCGCGCACGGCCTTCCACGGCATGAACGCGCTGCACGCCGCCAGAAGCCTGCACGTCTACCGCTACTTGCTCGAGGTGGCCAACATGGACGTCAACAAGCCGGACACCACTCCAGGTAGGAAGACTCCCCTCGAGCGAGCCATTGCCGGTGGGGACCTGCCCTCTGTCAGGTATCTCATTGATCATGGTGCTGATATCCATCATGAACGTGAAGGAAACATCACTTTTCTTCATTCAGCTGCAAAGAAAGGATTCCCTGCTACATACAATCTGCATTCTGTCATGATGAGCAGCCTTACGTTGAATGTGGAGAAAAATGCAGACAATACTCCACTGAAACATGTTCCTCCAAGAGTGAACTGCTCTTTTTGTGTGTTATTTAGGACTGGGAGGACTGAAATAGTAAAATTGCTGCTTTCTAGAGGAGCTCATGTTGATGGCAAATCAGATCATGGGACACCTCTGCATTTTGCTGCTATTAAAGGATATGAAAGTACTGTGAAGATTTTGTTGGAGCACCAAGCAGATCCCAACAAGGTTATGCCTTCTTCTCAAGCAACACCTTTATCTGCGGCGTTATTCACTACTTCCTTACCTTGTGTGAAGCTATTGATCCAGGCTGGAGCTGATGTAAATGCTACAAACAACCCCCTGGCGAGAGCTGCAGGGAGTGGATTAACTGAAGCTATAAAGTTGTTGTTGAAGGCTGGAGCAAACCCAAATTGTCCTGACACGCATGGTAGAATGCCAATAGAGCTGGCTGCTGTGTATGGTACAAGGGAAGATGTTGAGATTCTATTTCCTTTGACCAACCCAATTCCAACTGTTGCTGACTGGAGCGTTGATGGGGTAATTACTTATGCCAATCTGGAACGCAAGAAGCTAGAGGATGATGATTACGTTAACACGAAAATGTCTGACCTGAAACAAAAAGGGAATGAAGCATTTGATGAGCAGGATTATGAAAAAGCATCAGTGTGGTACACACAGGCACTGGAAGTTGATCCTTGTGATGCCACAACTCTTCTAAAGAGGTGTCTTTGCTGGCTTCGCATGGGTGAGGGAAAAAAGGCTGTGAAAGATGCAACCACATGCGCAAAACATCACCCGAAGTTGTCGGAGGCCTACCATCGGCTAGGAGAAGCTCTAATGCTTGAGAAGGATTATGAGAAAGCTTGCGTGGCGTTGACCCATGGTATAGAGTTGGATCCTGAAAGTGATGAGATGGACAAACTGTTCTGGGAGGCGATGGACCTGAAGAACTGA</cdnaseq>

Protein Sequence

<aaseq>MDGIMSLPDLFEKLLGDDQDSWPAEANLLLAAHDGNLRRIKEIAATLDDDGEGIAATVARTAFHGMNALHAARSLHVYRYLLEVANMDVNKPDTTPGRKTPLERAIAGGDLPSVRYLIDHGADIHHEREGNITFLHSAAKKGFPATYNLHSVMMSSLTLNVEKNADNTPLKHVPPRVNCSFCVLFRTGRTEIVKLLLSRGAHVDGKSDHGTPLHFAAIKGYESTVKILLEHQADPNKVMPSSQATPLSAALFTTSLPCVKLLIQAGADVNATNNPLARAAGSGLTEAIKLLLKAGANPNCPDTHGRMPIELAAVYGTREDVEILFPLTNPIPTVADWSVDGVITYANLERKKLEDDDYVNTKMSDLKQKGNEAFDEQDYEKASVWYTQALEVDPCDATTLLKRCLCWLRMGEGKKAVKDATTCAKHHPKLSEAYHRLGEALMLEKDYEKACVALTHGIELDPESDEMDKLFWEAMDLKN</aaseq>

Gene Sequence

<dnaseqindica>1..52#155..226#387..551#684..818#1023..1102#1637..1694#1837..1976#2229..2318#2458..2574#3290..3442#3934..4035#4553..4723#4823..4902#5000..5024#ATGGACGGCATCATGTCGCTGCCCGACCTCTTCGAGAAGCTTCTCGGCGACGGTATTGCGCTGCATTCATCATGTCTTCTTCTCTTCATTCTTTATTCTTAATCTAATCTCTTCCTCCTCCTCCTCGATCCATTTGCCTGCCATTCACGCGCAGATCAGGACAGCTGGCCCGCGGAGGCCAACTTGCTCCTCGCCGCCCACGACGGCAACCTCCGCCGCATCAAGGGTACACTTCTCTTCCTCGCCACCCCTGAACACCTGTACTTGTACATGCAAGAAAACAAAACAAAAAAATAATCTTTTTTTAAAATCTTTTTCGGGCTTCTTGATTCCGCTCATGGAAGTGATAGAACGAGACTTGCTTGCTTGCTGTTGTGCTCAATCAGAGATCGCCGCGACGCTGGACGACGACGGGGAGGGGATCGCGGCCACCGTGGCGCGCACGGCCTTCCACGGCATGAACGCGCTGCACGCCGCCAGAAGCCTGCACGTCTACCGCTACTTGCTCGAGGTGGCCAACATGGACGTCAACAAGCCGGACACCACTCCAGGTGCATGTCAAGATTCATCCTCCTCTTCTGCTTCCTTTTGTCCTCTTCGCCAGCTAGGAGTACTAGCTAGCTATTTCAGCTGGATGTCTTACTGTTATTGTGAATCTGGTTTTCATTGCCTTGCCACGCTAGGTAGGAAGACTCCCCTCGAGCGAGCCATTGCCGGTGGGGACCTGCCCTCTGTCAGGTATCTCATTGATCATGGTGCTGATATCCATCATGAACGTGAAGGAAACATCACTTTTCTTCATTCAGCTGCAAAGAAAGGTATAAACAGGGGAAACCAATCCTCAGATTTAGTTCAACTTCTTCTTTTTCTTTTTTTGTTTTTATTACAAAAGAACAATCTGAGTTATGCTGTACTACCCGGCATACTATGTGTCATTCGGAATACTGCTTCAACCCAATCCCGTTCAGTGGAACAGCATTATGCCCTTGGATTTATTAGGGGAATATCCTATCTTCTTGTAGGATTCCCTGCTACATACAATCTGCATTCTGTCATGATGAGCAGCCTTACGTTGAATGTGGAGAAAAATGCAGACAATACTGTAAGGGCCTCATTGTTTGCCCCATGGCTTATAAGCTAAAGCCAAAATCTGAACTTTAAAACTTGATTTTTAATTTGATTTTGATGTTTTTTTTTTCAACATAGTTTTTTTTTCAGCTTTGACTTTTAAGTCGCTAAGAATATATATACAAAAGTTTTTTTCGCACAACATTTTTTAATTGCTAATAAGCCGTTACGGCTTATAATAAGTTGTAAGCAACTGATGGGGACCTTAGCGTCTAGCAAATGTACAACAAAGCAAGCCTAATGCAGCATTTCCTGACGCATTTTGTTTTTACAGGTGTTGTTTAAGTGATATAGACCTTGCTGATGTACACTTTTCATGTTCATCAGCCTATACATATTAATTCATCATAAGAAAATGTTAAAATATATCATTCACATCATCATAGATTATCTGCACTTTACCATTCATCCTAGTATAACTGTTGGACTGTTTCTACTTCATAAACCTCATATTTATTTATCAACCTGCTGCCAGGGTTTCTTTTTGTGTGTGTGTGTTTTGTTCTAGCCACTGAAACATGTTCCTCCAAGAGTGAACTGCTCTTTTTGTGTGTTATTTAGGACTGGTTTGTCTTTTTGTTTTATTATCCTCCAGTTAAGCAGTTAAGTGTTAAATTGCCTCTTTGCTCTGGCTTCTCAAACTTGTCTGCCCCCAAATTGTTTCTCTCATACATCAGTGACCTTCAATTTTTTTATGTGATTGTTCAGGGAGGACTGAAATAGTAAAATTGCTGCTTTCTAGAGGAGCTCATGTTGATGGCAAATCAGATCATGGGACACCTCTGCATTTTGCTGCTATTAAAGGATATGAAAGTACTGTGAAGATTTTGTTGGAGCACCAAGCAGATGTACGATGCTTATACTTTTCTTATGTTGGGGCTTACTATTTCCTCCCACTGTTCCATCCTTACTCTCATTTTGGTTATTGATGTGTGAGCACTGAGCTAGCCCAGGTCTGGCTGAGCCGTGATCCACACATTAACAACTACTCCACTGAATAATCAATAGGAACAACGGAAGAAACACAAACAACTTTCTTAAATTATCTCTTTCTCTAGGAACTGTCATAATGTATGATAATACATTTCTTTCTTTTCCAGCCCAACAAGGTTATGCCTTCTTCTCAAGCAACACCTTTATCTGCGGCGTTATTCACTACTTCCTTACCTTGTGTGAAGCTATTGATCCAGGTACAATATTTTCTCCTTTGGACTGCTGCAATAGGATAAGGCTAAATAACTGATACTATATATGGCTAGAGCTGTTATAATCATCAAGTTATGTGAAGAAAATGTATAATCATTTTGTATTATACATAAACATTTGTAGGCTGGAGCTGATGTAAATGCTACAAACAACCCCCTGGCGAGAGCTGCAGGGAGTGGATTAACTGAAGCTATAAAGTTGTTGTTGAAGGCTGGAGCAAACCCAAATTGTCCTGACACGGTGAGCCTTCTGTTTTGCTTATCACACCATCACTATCAGCAGATTGAGTTTGTAGCTTCAATGATTTTAGGCCTGTGGCATTGATATGCATCACTAGTATGGAACAATGAAATGTATTCCTGAAAATTCACATATGTGGCACACGCTTATTTGTAAAAGATACTAGGCAAAATTGGTTATAGAGCATCGAAAGTTCACAGTTTTTGGTTATAGGAAATTCTTTTTTCTTTCGGAAACAAGATTATGCAAAAGATTTGGAGCATTTGAGCATCAGTTGAATAGTGTGATTTGATTTGTGAGACATGTGTACACCATTCTGTGGTGTGTTTCGCAGACCACTATCATCTGCTTCTAGAGTTGACACAAGCCTGCTAAATTCCCTGTTTTCATTTTCATTTAGCTTTTTTTGTTGGTCAGGTGCATAGAGATAATTAATAGTCGGTGAGCATAATGCTAATTGGTCTTTTCTAATGGCAACATGTTTAAAAAGTTTAGGACAACAAGAACTGATGGTAGCAATTTTGAAAAAATTATTGATAAAACAAGTACTATTCCATATTCATCAGTCATTTATGTGGTGGCATTACATCATTTAGTGATGTGCCTTGGTGGAGCAAAGTTAATTCCTAAATTAGCGTTATTGGAAGGAAGCATCGTCTTACCTTTCTCTAATCTCCAATATGACTTTATAAAGCTTTATTCGTTTGCCAAACAGCATGGTAGAATGCCAATAGAGCTGGCTGCTGTGTATGGTACAAGGGAAGATGTTGAGATTCTATTTCCTTTGACCAACCCAATTCCAACTGTTGCTGACTGGAGCGTTGATGGGGTAATTACTTATGCCAATCTGGAACGCAAGAAGCTAGAGGTATGTTACTATAGCAGTTGCCCATACTTGCTAGCGTCTGGTTGCTCTCTTTAGCTTTCTTCATGTGGGCTTGTTTTATTGTTCTTGCAAAAAGAAGATGAAGGAAGTTTGTTTCTATATTAAATTTGCTTCCCTGAATTGATACCTGGTGAGGGGGATTGGTACATGCTTTTCTAGATACTGATACACATCAGGTTTCCCAGGATCACTGGTAAAAATGGTGGATTACCAGCGGGGTCTCAAACCCTGTTTTGACACAAGGAACCACAATTGTTTGTACCCATTGCAGGCAACATGCCACCTTGTTCTCAGCAGCAGGATAGTTTGTATTAGTTTTGACCCAAAGTTAACAATAGCTCGTAGCTTGTTCATCAGACCTAACAATAGAGAAACAGGGTTTATCAATAAACATCCCCTTTTACTTGTTACATTGCATTTTGTCACATTGGACCTCTGAATCTGTCTGACTCATGCTGTTATAAATTGAACAGGATGATGATTACGTTAACACGAAAATGTCTGACCTGAAACAAAAAGGGAATGAAGCATTTGATGAGCAGGATTATGAAAAAGCATCAGTGTGGTACACACAGGTACATTCTTCTATCTACTTAAATAGTGCATCGACTATTAGAATGCTACTATGCTGAAAGACTAGTGCCATGAGCTCATCACTTCTTTTCATTCAACTCAATGCAAAATTTTCTGTTTCCTTGAATTGTCAATAAGATGCAGCTTTCTTCCATTTCATGGATTCAAAAAATCAGCAGTTATACCTTTTTTACAGGATAAGCAATGATTTTTTGATATAAAATCATCATGAGCTTTGTGCACAAAGTATATGTACTACGAAACAGTGTCTCCTTTGAGTAGTTATTTTGATGATTCAGTATGAGTTGAGCAACAGCAGTTATGTGGGATGATATATCTTCTAGGAATTCTGTCATATAATTGCTATGCCATCTACAGTTTTAAGTTCTTGTTGATATGTGAATTTCACTATGGGTTCAACTCTATCTGAGATAAATGAGAAATGTAACTTTGTGACAATTAAATTTTTGGATGTGGCAGCAACACTATATTTGACAGATACTGTTTGGTTCACCGCAGGCACTGGAAGTTGATCCTTGTGATGCCACAACTCTTCTAAAGAGGTGTCTTTGCTGGCTTCGCATGGGTGAGGGAAAAAAGGCTGTGAAAGATGCAACCACATGCGCAAAACATCACCCGAAGTTGTCGGAGGCCTACCATCGGCTAGGAGAAGCTCTAATGCTTGAGAAGGTGCAGCATAAAAAAAACTTCAATTCACCATTCCATTCTCATTGCTAACTAACTACCATCTCATTTGGCTGACCATATGCGCATTTTGTCCTTCATTAGGATTATGAGAAAGCTTGCGTGGCGTTGACCCATGGTATAGAGTTGGATCCTGAAAGTGATGAGATGGACAAACTGTTCTGGTAAGAGATTCTCACCACTAGTCCACTGGTATTTGTGCATTGTAAGTTGTGCTTTGATATCATTGTGTTGGATGTTCTAATGGAGATTTGCTCTCAGGGAGGCGATGGACCTGAAGAACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035769

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=BGIOSGA035769&oldid=52074"