Os12g0162900

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Revision as of 10:22, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os12g0162900| Description = Protein of unknown function DUF537 family protein| Version = NM_001072758.2 GI:297612721 GeneID:4351578| Length = 48...")
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Gene Name

Os12g0162900

Description

Protein of unknown function DUF537 family protein

Version

NM_001072758.2 GI:297612721 GeneID:4351578

Length

4821 bp

Definition

Oryza sativa Japonica Group Os12g0162900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:3179026..3183846

Sequence Coding Region

3183344..3183769

Expression

GEO Profiles:Os12g0162900

Genome Context

<gbrowseImage1> name=NC_008405:3179026..3183846 source=RiceChromosome12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008405:3179026..3183846 source=RiceChromosome12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcccagctcgtgctcctccgccgcatccccgtccgccgccactgcggccccagcagcagccgcctcctcagctcggccgccgccggggcaggcggcgtggggcggcggggaccctaccagcagcagcagcaggaggaggaggagagcaaggcggtgaaggtgtccgtgtggtgggacttcgagaactgcaacctccccaacggcgtcaaccccggccgcgtcgccccgcgcgtcaccgccgcgctccgcgccgccggcatccgcggcccgctctccatcaccgccttcggggacgtcgtccagctcgcccggccgtcccaggaggacctcgtcgccaccggcgtctccatctcccacgtccccaacagttgcgtccgctctcctttccccacttcgatccccccctgcggttctgatttttga</cdnaseq>

Protein Sequence

<aaseq>MSQLVLLRRIPVRRHCGPSSSRLLSSAAAGAGGVGRRGPYQQQQ QEEEESKAVKVSVWWDFENCNLPNGVNPGRVAPRVTAALRAAGIRGPLSITAFGDVVQ LARPSQEDLVATGVSISHVPNSCVRSPFPTSIPPCGSDF</aaseq>

Gene Sequence

<dnaseqindica>78..503#cgccgccaccgcctgcgccgccggcgagagaccccggcccccgccgatccaaaccccacccaccacccgcagcggccatgtcccagctcgtgctcctccgccgcatccccgtccgccgccactgcggccccagcagcagccgcctcctcagctcggccgccgccggggcaggcggcgtggggcggcggggaccctaccagcagcagcagcaggaggaggaggagagcaaggcggtgaaggtgtccgtgtggtgggacttcgagaactgcaacctccccaacggcgtcaaccccggccgcgtcgccccgcgcgtcaccgccgcgctccgcgccgccggcatccgcggcccgctctccatcaccgccttcggggacgtcgtccagctcgcccggccgtcccaggaggacctcgtcgccaccggcgtctccatctcccacgtccccaacagttgcgtccgctctcctttccccacttcgatccccccctgcggttctgatttttgacacgtatcctctttgagttgttcttcgtctctagagatgtaatcatgaattaggaaatggtattgtcgcctttgctacgagtgatgcgccctagtgcgtatttctctggattatgcgttgctggaggagtgattgatatgagtttccatattattagagggttaatgagcaattgatcattcctttttgtgtagaaatggatcatgggtagctcatagggatgaatgatgcggagtacaagagctatgctctccttctgtttagccttacaaaggctacacatttttttttgtcatgggctcagatttgtcggctaatttttctagtgaagcacaaaataaaataaatctatttggttaatgtttacttgattttggtgtcaattagcttcaaattgctagatgatcaggaccatttcattttcatcatggatattggggaaaaagatctctatgaatattttcttttttaattcctgatgtagttaagttatgtggttcttgttgtttttgatgggtaaattattaggtagtgcccgagcagtgttgtcgagtttaatacactttcggtgactccaatatcaggtggttagttggacggtctcactgccgtagatgacagttgaatgtgcttggatgtttgttcctaaaaatggtgaattagcagcattagcgcttctcattagcactacttatgttaacagtgaaaacttagcattctgtcacctccattatttttttcgtgcattcattttcttatgatgtattttggtttcttcttgttctgctaataatgctattgccgtgatgtaggtggaaagaatagttctgatcggtcatttatggctgatcttgtctattggatcgcacagaatcccccaccagcccattttttccttatatctggggataaagactttgcaaacattttgcatcgcctgcgaatgagcaactataacatactgcttgcttctcctggtactgctaccaccagtgtactctgtagtgcagcaacaatcatgtggccctgggaagctctagtgaaaggggaggatttctcacctaaacgttttaaccacccacctgatggtttagctggttcttggtatggtcactataaaggagccctggatgatccctttgtagacacagaacccgaggaactcgttgtagtaccatctgatctcaagcatggttcaatccccaaatatgtggttaatgcgatccagcaggtactaaaatcatatcctaatggagtgaatctgtcagacctccgactagagcttaaaaagaaaaatatttatctgggaaatgatttttttggccacaagaagttctcttgccttctccaatcgctgccaaattttgtggaatttattagtcctccagttggtgcaaaccagccatgtgtagttgcagccaacagaaaattgatgggtcctgacaaacaaaattttgagagttcaactgaaagtaatgtcggggacaataacttgaatcgagcaatacacaatgacaagccacctccactccctgtgtcgacttctttttctgaaaagaatgctaagaccgaaaattcttctcaaaatattgccaagaagctgcagactgcaagcgagaatccacctacatttgctgtcttatcttcccgatcagatgtgttacctgaggatcaaaaggagcacccagctgccaacttgaatgcacagatagaatcaccagaggaccacaaggaagttgatcctacgactgcctctggaattccctcttcctcaggggtggaagacaatgttaacaaggaagggctattcaaaaggatctggctattgtggaaaggccctgagagtgccaagtctgaagtttcccatcttgaaagtacttccactgtagtggttggtgatgcccaatctcctcagcaagagcataatgctaatgagcatcggagacttttgaagagagtctataaaaaatcttgtcgaaatggcagcacagacggatctgacagtgtgacaacaggcagtgcatcaacttcatctcatgatgaccgctctaaaaagttaaagcatgtggatgatatgagatcattagaaagggatacatcaaattcagaaccatgtgatagatctgtatctgtttccgtggacaaagctgagaaaggagatggtatttccaaaatggataagggtttatttagctgggtaacagggtggttgaaatttggaaaatcagatgcagataatgttacagccaatagaaatgtgattgatgaagcaagcacagactcactaaaaggacctgaatccttgaaggtttcagcttgtggaagtggagaagaggaggttcatgaaatattcacaaaatctttcttctgggatgttttgcagcaacagctatcaaagccccttggttctgagcttgtttcaaaagcaaagacaaggtaagatttttatgcctttatacattaattaatgccttctggttagttctagaccttactttgcataccaaaattttttgacctgataaaagatttccaataatgtaacatggtgttcttgtatttctttccataccagaagaaatatgtaggtctactgagtatcagcctgtcaattagtgagaagaaaataactcgcaaagctgagttttctactctgatgtcagcaagacaattctgagtgtgtttgtgacagatcaaaaactttggtttatgtgtgtagcttgatatagtgtgttatgagcaagttgaaataactgttattgcccagatggttcatttagtttgtagctggaatgcctgtaagtctatagaagtattagtttttccttttacttcaacttcctatgagcatgtctgtttgggtacactagaagacgagtactaattgccgggcgaaaaaaataattctaacccggattcttatgagatgatttgataaatcatttttggcttgtcccttcgagagaatcttactgacatgattacattttcgtgatcagggaggagttagtgcatcaattgcacaaattagattgttggcctctgaaaggcctagctgagaaagatctccatcagctggtgaatattttagtttcagagaagaaatgggttgaagaaaccccttccaggtattttccgtttcgtcttacccttcctcacaagagaacatgcattccatcgaactccaggaagtttgatggtctcagttctctgttttccaatgggaagccattgccgggcaaatacactggtgatcaaagcacaaacagtcctctccctagggaggaaactttgtcggactgtcacaagctgttaaaggaccttcttctggaatatgaatatggttttaacatcagcattttcaagcttcgttttgctcagaagcatggatatgagctagaccctcaaaagcttggatatccagaccttaagtccctgttgcagattatgcctggtgtgagagtaaaatttccaagggttctacctgcagaaaacggaaatggccaagctggcagcaagggcaatggaaatcaaagtaatggcgatgactttgtttgggaggaacttggtcctgtatctgctaccactgaaactgtgcaaactgttgacaaagaaatgtgctaccgtcctcctactctttcagatgatgatttttcagaggatgagaaccatgcagaccagcagcctagaaaagaggctgaagcaagctcgctcctccaaattattgattcctggcacaatagtaaggatgtctctagcaaaaaaactcaagacattgatgggcttgttgattgttcaaggagtgaccatggctatcttgacaatctgaccggaggaaatgcaccgaagcctacaaggccacagcataaacagtactctttcgtgtcagactcggaagaagatacagagaagggtaagctagttgagagcgtcttgggcagcttgcaaaaagcacggacctcaaagttgcacaactgaaatctgttgtatgcatcaatgctgacttgctgctttcatccccaaattgcagcattagcctggtaacattctgaaagcagagtgttccttgtttggatgaatcatacaccaaacaaaatggcactcctatggttatctgtcaactgtaggttcagctgctataatatcggcaggagtcatctaacaaagtagcattcttttgttctccccagttgagggagaatgcttatgatgtcatatggttaacaaagtctagagttctagagttataataaggaggaattctggaacctgaacgcttggaagtttttaaccaagatgttattatcatttgctctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os12g0162900, RefSeq:Os12g0162900