Os09g0369400

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Revision as of 07:23, 21 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os09g0369400| Description = Similar to Trehalose-6-phosphate phosphatase| Version = NM_001069549.1 GI:115478840 GeneID:4346885| Length = 3748 bp...")
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Gene Name

Os09g0369400

Description

Similar to Trehalose-6-phosphate phosphatase

Version

NM_001069549.1 GI:115478840 GeneID:4346885

Length

3748 bp

Definition

Oryza sativa Japonica Group Os09g0369400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 9

Location

Chromosome 9:12856647..12860394

Sequence Coding Region

12856647..12857576,12857659..12857806,12857886..12857956,12858171..12858263,12858874..12858948
,12859686..12859709,12860341..12860394

Expression

GEO Profiles:Os09g0369400

Genome Context

<gbrowseImage1> name=NC_008402:12856647..12860394 source=RiceChromosome09 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008402:12856647..12860394 source=RiceChromosome09 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaaggcgagcgtggtggtgcctgagcaggtgggcgcggcggcggcggcgcaggtggggtgcccctgtccgggcacgacgctgttcccgtacccgccgccgcgcgccgggatcgccgtgcggcgcaagtgcctgcaggcggcgcagcagctggagctcggcgccgggctgcgcggcggctgggtggagtccatgcgggcgtcgtcgcccacccacgccaaggccgccgccgccctcgccgccggcgtcgacgaggagcacgccgcctggatggtccgtttccgttcaccgattgatcgatgttcgtcgcgttcttggcgcgcgcgcgctgacactgacatgaaccgtgcatttccgttcgtctttgtgcaggcgaggcacccgtcggcgctgggcgagttcgagaaggtggtggcggcgtcgaaggggaagcagatcgtcatgttcctcgactacgacggcaccctctcccccatcgtcgacgaccccgacgccgccttcatgagcgagacggtgagcttgagctcccctcccctgtcacctactctgctcctccactcatcatcatctcacacctctctccttcctcatcagatgcggatggccgtgcgcagcgtggcgaagcacttcccgacggcgatcgtgagcgggcggtgccgcgacaaggtgttcgagttcgtgaagctcgccgagctgtactacgcggggagccacggcatggacatcaagggccccgcctcccgccacgccgccgccaagtctcctccccacaacaagggagtcctcttccagccggccagcgagttcctccccatgatcgagcaggtgcaccagcgactcgagcaggccaccagctccatcccgggcgccaaggtcgagaacaacaagttctgcgtctccgtccacttccggtgcgtcgacgagaagagttggggggcgttggcggagacggtgaggagggtggtgagggagttcccgcggctgcggctgagccaggggaggatggtgttcgaggtgcggccgaccatcaagtgggacaagggcaaggccctcgagttcctcctcgactcgctcggtttcgccgactgcagcgacgtgctgccggtctacatcggcgacgaccgcacggacgaggacgcgttcaaggttttgcggcggcgtgggcagggcgtggggatcctggtgtccaagcaccccaaggagacgagcgcctccttctccctccaggagcccgccgagctgaagaaaagctcagtgcactacccactgccggcacaacgtagcaacaggctgaaccgcatattggtcaattggtggggtgaaggacttaaggacaaattgtgtgctttggagccaagccatgagagggaggggtgcatggccccccactag</cdnaseq>

Protein Sequence

<aaseq>MAKASVVVPEQVGAAAAAQVGCPCPGTTLFPYPPPRAGIAVRRK CLQAAQQLELGAGLRGGWVESMRASSPTHAKAAAALAAGVDEEHAAWMVRFRSPIDRC SSRSWRARADTDMNRAFPFVFVQARHPSALGEFEKVVAASKGKQIVMFLDYDGTLSPI VDDPDAAFMSETVSLSSPPLSPTLLLHSSSSHTSLLPHQMRMAVRSVAKHFPTAIVSG RCRDKVFEFVKLAELYYAGSHGMDIKGPASRHAAAKSPPHNKGVLFQPASEFLPMIEQ VHQRLEQATSSIPGAKVENNKFCVSVHFRCVDEKSWGALAETVRRVVREFPRLRLSQG RMVFEVRPTIKWDKGKALEFLLDSLGFADCSDVLPVYIGDDRTDEDAFKVLRRRGQGV GILVSKHPKETSASFSLQEPAELKKSSVHYPLPAQRSNRLNRILVNWWGEGLKDKLCA LEPSHEREGCMAPH</aaseq>

Gene Sequence

<dnaseqindica>1..930#1013..1160#1240..1310#1525..1617#2228..2302#3040..3063#3695..3748#atggcgaaggcgagcgtggtggtgcctgagcaggtgggcgcggcggcggcggcgcaggtggggtgcccctgtccgggcacgacgctgttcccgtacccgccgccgcgcgccgggatcgccgtgcggcgcaagtgcctgcaggcggcgcagcagctggagctcggcgccgggctgcgcggcggctgggtggagtccatgcgggcgtcgtcgcccacccacgccaaggccgccgccgccctcgccgccggcgtcgacgaggagcacgccgcctggatggtccgtttccgttcaccgattgatcgatgttcgtcgcgttcttggcgcgcgcgcgctgacactgacatgaaccgtgcatttccgttcgtctttgtgcaggcgaggcacccgtcggcgctgggcgagttcgagaaggtggtggcggcgtcgaaggggaagcagatcgtcatgttcctcgactacgacggcaccctctcccccatcgtcgacgaccccgacgccgccttcatgagcgagacggtgagcttgagctcccctcccctgtcacctactctgctcctccactcatcatcatctcacacctctctccttcctcatcagatgcggatggccgtgcgcagcgtggcgaagcacttcccgacggcgatcgtgagcgggcggtgccgcgacaaggtgttcgagttcgtgaagctcgccgagctgtactacgcggggagccacggcatggacatcaagggccccgcctcccgccacgccgccgccaagtctcctccccacaacaagggagtcctcttccagccggccagcgagttcctccccatgatcgagcaggtgcaccagcgactcgagcaggccaccagctccatcccgggcgccaaggtcgagaacaacaagttctgcgtctccgtccacttccggtgcgtcgacgagaaggtaactgatcgatctgcaagctcgattggttgattggcttttttcatttggtgatcaattgatgatggaattgggggtgcagagttggggggcgttggcggagacggtgaggagggtggtgagggagttcccgcggctgcggctgagccaggggaggatggtgttcgaggtgcggccgaccatcaagtgggacaagggcaaggccctcgagttcctcctcgactcgctcggtacgtgcagtgtgttactactctacaactttgccattcctcgtcggcaaaaaaacccattggctctgctccgccgcaggtttcgccgactgcagcgacgtgctgccggtctacatcggcgacgaccgcacggacgaggacgcgttcaaggtaaataaatacttgtactactaaccgacaaaaattactgcatgctgccacgctacgactacgtgtagcagcagcagtaacacgagacgctaccactacttcgtttgcaagtggttcgacgaacgtacggccggttcgtcgcgtgcagctagcgacaacgtacgtcttcttctacgttggactaatcggcgagccgtgtgcatgatccgggcaggttttgcggcggcgtgggcagggcgtggggatcctggtgtccaagcaccccaaggagacgagcgcctccttctccctccaggagcccgccgaggtaattaagcaaaaccactcgtacgcacgcatgaaaacgttcgtatcactctgctcatgtttgtgttgcaattgcgacaacaggtgatggagttcttgctgcggctcgtggagtggaatcgcctgtccaggacacggttgaggctgtaacaattgaatttaaccggcgaggctagctagagagaagcgcgtgatctgggccgtccaagcgattacatcggcagggtaacccgtgacgctgatcgatcgtggattctacaccaacacaggtgctcgaaaatggtgtccacattgcagaagcgcagagagctaattaatcaacgacggacgagagaaactgatggctgtctggccattgttgtgccataatcctgtttagttcttcacctttctcccttcttcttttttcccatttggggccccccttttggtaccaaccatgtaaattccgtactactagtaccttgtcatgcacaagaggaagatcaatgcaaataatgaagagcaactaatgcaagtatatactcatcagcacattttctttctgctagcttagctatagctcttgctctgatctgatgcaccaatgatgcattacacatttgctttagctgaagaaaagctcagtgcactacccactgccggcacaacgtagcaacaggctgaaccgcatattggtcaattgggtgagtgtaaagcttgatctgctcgttgatggatgttgttaggacgagcagtaaactgggcctcactcacatgatcggtagcacggagtggtaccacggcttctctactgctctctgtcaatggatccaacgacacattgccttgtcatgttcttcctgtgaatcatgtcctcatctctgaagaagggcctgccagagcaacctctttcagcgtgttcttggtgggcgaagctttcactgatgcacaaaatgagcagcaatctttgatgaggttctgtgtgctcgttgaccactaatttgttcggatcgaaagctcgacaatgtcagtaactatcactgcatcatgctctcgcacacatcgagtgaatgagacatcctcgatcgactcatttaagtagattgcagtaataactgaaacgagcatcgattaaccaacttggatcacttgcaaacaagggaaggtaggtacgacgctgcatgcagattgattgatctggtcagatcataatagtctcgcttaaaaattgcacatgaatcgcactcattttggatttggatgggactgatctcgattgtacacgttgatctgccttgaagagttacacgacaaacacagccggcccacaggcaaaataatccttggaaataatgcagagaaaagattagcatctgcaagaacctcgtactgagaagctagctgttggatcgatccatggtgcatttttctgcatccacagtggggtgaaggacttaaggacaaagtgagcaatcatcaacagatatactagtacgagttaatcataattatgtgttagatccagtgctagctatgatctagtagttaaaatcatttcttcctcctaacaatactagcatatgcaccgataataatcaacgagagaagtgctagtgctggttctacatgcctacaatccacgcatcatatcaatcattaaggttgatatttcagtccaatggcgcactatgagagagcccaaaaagtaagaaaaatgaggggttaagtgattttactacacacacaaaacgactgtccacagaaaccatgccgatgtcactgataggtgggccccacgggctggttagacttcgggggcccttttgtcggcggctatataagaaatcacagtacacatacatagctatttttttcttttttttataacaaacttaaaaatagtcagatatttaaactgttgtcgatttgcactctccaaaaagtttaaactgatggtgaagtgatcaaatgccaccatccccattggccagccccacatcagaaaggagcaaccaattggtggaatcttggataatgtatcttgatatacacaagacataatatttaccatttggggatatcatctgtgcatccagttgtgtgctttggagccaagccatgagagggaggggtgcatggccccccactag</dnaseqindica>

External Link(s)

NCBI Gene:Os09g0369400, RefSeq:Os09g0369400