BGIOSGA035813

From RiceWiki
Revision as of 08:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035813| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035813, complete gene.| tag = OS12G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035813

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035813, complete gene.

LocusTag

OS12G0620600

Ensembl Transcript ID

BGIOSGA035813-TA

Ensembl Protein ID

BGIOSGA035813-PA

Length

4024

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:22057705..22061728

Sequence Coding Region

22061390..22061728,22059716..22059862,22058905..22059600,22057705..22058772

Genome Context

<gbrowseImage1> name=IndicaChromosome12:22057705..22061728 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:22057705..22061728 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTGGCCGTGGCCGCCTCCGGCGAGGAAGTTCCGTGTCAGGCTGGTGGTGCGGCGGGCGGAGGGGCTCACGGCGACGGCGACGGCGACGGCGAGCTCGTCGCCGGTGGCGGAGGCGAAGGTGGCGGTGGAGGTGAGGTGGAAGGGGCCCAAGGCGTCGCCGCTGGGGTCGCTGCGGCGGGTGATGCACAGCAACCGGACGCGGCTGGAGTCGGCGGCGGAGGCGGCGGTGGCGTGGGAGGAGGAGTTCGAGAGGGTGGAGACGTTCACGGCGACGTCGCACCGCAAGTCCGGCGCCGCCTTCCACCCGTGGGACCTCGCCTTCTCCGTCTTCGTCAATGATTCAAATAAAGGGCCAAAGGGTGAATTGATTCTGGGTACCGCTTCACTGAACCTAGCAGAGTACACATCTGCTTCTGAAGAAGTCGAGATAATCCTCCCATTGTCGGTGCCAAACGGTTCATCCGAGTCTTCCCCATCACTTCATCTCACTTTGAGCCTGGTGGAATTAGGACCTCCTCACCAATCACCTGATGCTTCACAGCGTTCTGCTGTTACCGCTCCATTGTCACCTTCCAGTGGTGACTCTGTTCCTTCCAGCAAAGATGAGGTTTCTTCTGTCATTAAAGCGGGGCTGAGAAATCTAAAAATTCTCACAGATCTAGTGTCGACACGGAGGTCCAAAAAGACTAACCGAGATGATGATGGCAGTGAGGATAAGTGCTATGTTCACAGTGATGGTGCTGAATACCCTTCTGATACTGACTCCCTCGACGAAGATCTAGATGATAGAGAGCGGGATGATGGCTTAGGGGGTTCAACTGTCAGGAAATCCTTCAGCTATGGTTCCTTGCAGTCTGTGAATTATGCCGGTGGCCTACTTTATGCACATGCAAGGATTGATGGAGAGCATGAGGACTGGATATACTACAGTCACCGGAAATCTGAAGCGGGTTATTCTGTAGAGCAAGAGGCCTCATCCACTGCTGAAGAACCTGTGGTTTCAGTATCGCGGAGGAGTCTGCTTCCCTGGAAGAAGAAGAGGAAATTGAATTTACGGTTATTGAAGGTACTGAAGAATAAAGGGGAACCTTTACTGAAGAAGGGGAATGACGAAGAGGGAGGTGATGACATTGACTACGATCGGCGATTATTGACCACTTCTGACGGAAATGCTTTAGAGGGATCAGATAGCTCCATCAATAGTATGGTGTCAATATTTGGTGATGATAATTTTGTAGTTGGGAATTGGGAGTCAAAGGAAGTACTTAGTCGTGATGGCCACCTGAGGTTGTCTACCCAGGTGTTCTTTGCATCAATTGACCAGAGAAGCGAACGAGCTGCAGGGGAGAGTGCCTGTACAGCACTTGTAGCTGTCATTGCAGATTGGTTTGAAGCAAACCAGGATCTGATGCCAATCCGCTCGCAGTTTGATAGCCTTATCCGAGAAGGGTCTCTGGAATGGAGGAAACTCTGTGAGAACGAGACATACAGAGAGCGATTTCCTGACAAGCACTTTGATCTTGAAACTGTCCTTCATGCCAAGATCCGCCCACTCACAGTTTCCCCCAACAGGTCATTCATTGGGTTCTTCCAGCCTGAAAGTACTGAGGATGGAAGTGGATTCGATTTCCTTGATGGAGCAATGTCATTTGACAACATATGGGATGAGATTAGCCGAGCAGCAGAGTGCTCCACTGAAAAACCTACTCTATATATTGTCAGCTGGAATGACCATTTCTTCGTCCTCAAGGTTGAGGCTGGCGCATATTACATTATCGATACACTTGGTGAGAGGCTGTATGAAGGTTGCAGCCAAGCTTACATCTTGAAGTTTGACGACAACACTACAATTCACAAAGTACCTGCTGAAAAGAAAGAAGCCAACCCTGATTCCAGCGGGCGGTTGAAGGATTCGTCAGATAGCTCATCAACTGATCAGGACAGCGGAACTGACACTGAAGAGTGCGAGCTCGTGTCGAAGGGTAAAGAATCATGCAAAGAGTACATCAAGAGCTTCTTGGCTGCCATCCCGATCCGCGAGCTGCAGGCCGACATCAAGAAGGGTATCATAGCATCGACGCCACTGCACCACCGTCTCCAGATCGAGTTCCATTACACCGAATCATGCCCCGAGGAGATCCCGCTGCCTGCTCCATTACCTGCCATTGAAGCTCCCTTTGAGTTCTCCTGGCCTGAGCCGCCTCCTGCCATGGAGGTTACCCTAGCACCCGCAGTCGCCGCCATATAA</cdnaseq>

Protein Sequence

<aaseq>MWPWPPPARKFRVRLVVRRAEGLTATATATASSSPVAEAKVAVEVRWKGPKASPLGSLRRVMHSNRTRLESAAEAAVAWEEEFERVETFTATSHRKSGAAFHPWDLAFSVFVNDSNKGPKGELILGTASLNLAEYTSASEEVEIILPLSVPNGSSESSPSLHLTLSLVELGPPHQSPDASQRSAVTAPLSPSSGDSVPSSKDEVSSVIKAGLRNLKILTDLVSTRRSKKTNRDDDGSEDKCYVHSDGAEYPSDTDSLDEDLDDRERDDGLGGSTVRKSFSYGSLQSVNYAGGLLYAHARIDGEHEDWIYYSHRKSEAGYSVEQEASSTAEEPVVSVSRRSLLPWKKKRKLNLRLLKVLKNKGEPLLKKGNDEEGGDDIDYDRRLLTTSDGNALEGSDSSINSMVSIFGDDNFVVGNWESKEVLSRDGHLRLSTQVFFASIDQRSERAAGESACTALVAVIADWFEANQDLMPIRSQFDSLIREGSLEWRKLCENETYRERFPDKHFDLETVLHAKIRPLTVSPNRSFIGFFQPESTEDGSGFDFLDGAMSFDNIWDEISRAAECSTEKPTLYIVSWNDHFFVLKVEAGAYYIIDTLGERLYEGCSQAYILKFDDNTTIHKVPAEKKEANPDSSGRLKDSSDSSSTDQDSGTDTEECELVSKGKESCKEYIKSFLAAIPIRELQADIKKGIIASTPLHHRLQIEFHYTESCPEEIPLPAPLPAIEAPFEFSWPEPPPAMEVTLAPAVAAI</aaseq>

Gene Sequence

<dnaseqindica>1..339#1867..2013#2129..2824#2957..4024#ATGTGGCCGTGGCCGCCTCCGGCGAGGAAGTTCCGTGTCAGGCTGGTGGTGCGGCGGGCGGAGGGGCTCACGGCGACGGCGACGGCGACGGCGAGCTCGTCGCCGGTGGCGGAGGCGAAGGTGGCGGTGGAGGTGAGGTGGAAGGGGCCCAAGGCGTCGCCGCTGGGGTCGCTGCGGCGGGTGATGCACAGCAACCGGACGCGGCTGGAGTCGGCGGCGGAGGCGGCGGTGGCGTGGGAGGAGGAGTTCGAGAGGGTGGAGACGTTCACGGCGACGTCGCACCGCAAGTCCGGCGCCGCCTTCCACCCGTGGGACCTCGCCTTCTCCGTCTTCGTCAATGTGAGCCACCGTCTCTTCTTCTCACTCTTCTCCTCTTTCTTGGTTTTGCCTCCTTGACGCGTTTCAATTTTTTAGATAGAATAAAATTTGTTCTTGTTTTATTGTTTGATTGGTTGTGTGAAATAAAAATAATGAAATTTTGCCTTGAATGGGATTTTCATCTAGAATGGACTTTTTTTTTGTGTGTTTCATTGTTTGGTTGGTTGGTTGGTTGGTTGTTTGTGTGAAATAAAAAGAGTGAAATTTTGCCTAGAATGGGATTTTCATCTAGAATGGAGGGTTTTTTTTTTTGGGGGTTTCATTGTTTGTTTGGTTGGTTGGTTGTGTGAAATAAAGAGGACGAAATTTTGCCTTCAATGAGCGCTTTTGGTTTGATTGGATGGAACAATTGCTGTTTGTCATGTTAGTTTTCGTCCAATGATCAATTTAATCTGTTTTGCTTTGGTTGTTTGAATGATTCTTGCTGATAATTTTTTATCTTATCATTCATGTCACATTGACAGCGAAAGTTTTGACTTTTCTTTTGAAAAAGTCAAGTCTCATTGGTTTATTGGTAATTCCCTTCAATTCGCTTGGATCTAACAGAACCATAAATAATATTAAATTGGTTTTATTTTTTACCAGTCCTCACTGTAAAAAACATGATGATTTAAGGAGCTTTAAAGAAACAGTGTTGCATGCTATTGGTTTATATTGGTGGTTGGTTTTGGCTTTGTACCTTTCTTTGGCGATGATATGATGGTTGATTGGTTGGGTTCTTACATTTTTTTTTTTGTTGGCGATGATTAAGTTATCAGCAAATTGTTGTGGCCAGAGTGTGGATTTATTGGACGTGCCTTGATCATTATACTTTTACATGACAACCTCAAACAATTAAACATTTCAAGCTAGATCGTTTCTGTTTTAAGAAAATGAGTTATTTGAATGTATGGTAAGTACCTCTCGGATCAACAAACAATTATGCTACTTATTTAATAGCTTGGCTAGCATAATTTAGGTTCAATGTATCAGAAAGCATATAACTGTTTTATCCGTTTAGAAGTTTTGACGGCAAATCAGGAAATGCCAAAAAACATCTACTTATTGTTCTGGAAACAAAAGGTGAAATTAGCCAATCATGAATTGTGAAGGATTATTGTCTTTTCCTGTGCCAATTTTTATTATGATGCAATTACCGTTTTGTCGTGTTCGATTCGACTGATAGGCGAGATTCTCATTTTGTCGCGTTGTTTGCTTTGGATATATCGTCATTCGTGTTTCAATATTATTTGATCTCTGCTGACAAGAGAAAGAAACAGAGCTAAGTTGGGAATTATTACAGCTAACGTAATTTGAGCAAGAATCAAAGCTAAAGTTATGGGTTATTACAGCTAACGTTATTTGAACAAAGCTAAAGCTGGGGGTTATTTCAGCTTTTACATGCTGTTAACCAAACAGTAATCTATATAAACAAGCGGAACAATACTTCTTTTGGCATTCTCCCTTGAGTTTAGTCTAACTTCCTTGGTTTTGCTTTTGTCCTTACAGGATTCAAATAAAGGGCCAAAGGGTGAATTGATTCTGGGTACCGCTTCACTGAACCTAGCAGAGTACACATCTGCTTCTGAAGAAGTCGAGATAATCCTCCCATTGTCGGTGCCAAACGGTTCATCCGAGTCTTCCCCATCACTTCATGTATGTCAGTTATACGATGCTATAAACCAGTTACATTGGAATGCCAATACTATTTTTTGTTTCTGATTCTCCTCAAATGGTCATCCATTACCTGACTTTAATATCCTTTTTTCAGCTCACTTTGAGCCTGGTGGAATTAGGACCTCCTCACCAATCACCTGATGCTTCACAGCGTTCTGCTGTTACCGCTCCATTGTCACCTTCCAGTGGTGACTCTGTTCCTTCCAGCAAAGATGAGGTTTCTTCTGTCATTAAAGCGGGGCTGAGAAATCTAAAAATTCTCACAGATCTAGTGTCGACACGGAGGTCCAAAAAGACTAACCGAGATGATGATGGCAGTGAGGATAAGTGCTATGTTCACAGTGATGGTGCTGAATACCCTTCTGATACTGACTCCCTCGACGAAGATCTAGATGATAGAGAGCGGGATGATGGCTTAGGGGGTTCAACTGTCAGGAAATCCTTCAGCTATGGTTCCTTGCAGTCTGTGAATTATGCCGGTGGCCTACTTTATGCACATGCAAGGATTGATGGAGAGCATGAGGACTGGATATACTACAGTCACCGGAAATCTGAAGCGGGTTATTCTGTAGAGCAAGAGGCCTCATCCACTGCTGAAGAACCTGTGGTTTCAGTATCGCGGAGGAGTCTGCTTCCCTGGAAGAAGAAGAGGAAATTGAATTTACGGTTATTGAAGGTACTGAAGAATAAAGGGGAACCTTTACTGAAGAAGGGGAATGACGAAGAGGGAGGTGATGACATTGACTACGATCGGCGATTATTGACCACTTCTGACGGAAATGCTTTAGAGGTACTTATTTCCTTGATATCTTGTGAAAGAGTCTTTAGTTTCATTTTTTTGTTCATCATATGACATCAATATTGGACCTGTATTATCGTTGGACCATTCATTATTTATAGCATATCATCTTCTCATCTGCAGGGATCAGATAGCTCCATCAATAGTATGGTGTCAATATTTGGTGATGATAATTTTGTAGTTGGGAATTGGGAGTCAAAGGAAGTACTTAGTCGTGATGGCCACCTGAGGTTGTCTACCCAGGTGTTCTTTGCATCAATTGACCAGAGAAGCGAACGAGCTGCAGGGGAGAGTGCCTGTACAGCACTTGTAGCTGTCATTGCAGATTGGTTTGAAGCAAACCAGGATCTGATGCCAATCCGCTCGCAGTTTGATAGCCTTATCCGAGAAGGGTCTCTGGAATGGAGGAAACTCTGTGAGAACGAGACATACAGAGAGCGATTTCCTGACAAGCACTTTGATCTTGAAACTGTCCTTCATGCCAAGATCCGCCCACTCACAGTTTCCCCCAACAGGTCATTCATTGGGTTCTTCCAGCCTGAAAGTACTGAGGATGGAAGTGGATTCGATTTCCTTGATGGAGCAATGTCATTTGACAACATATGGGATGAGATTAGCCGAGCAGCAGAGTGCTCCACTGAAAAACCTACTCTATATATTGTCAGCTGGAATGACCATTTCTTCGTCCTCAAGGTTGAGGCTGGCGCATATTACATTATCGATACACTTGGTGAGAGGCTGTATGAAGGTTGCAGCCAAGCTTACATCTTGAAGTTTGACGACAACACTACAATTCACAAAGTACCTGCTGAAAAGAAAGAAGCCAACCCTGATTCCAGCGGGCGGTTGAAGGATTCGTCAGATAGCTCATCAACTGATCAGGACAGCGGAACTGACACTGAAGAGTGCGAGCTCGTGTCGAAGGGTAAAGAATCATGCAAAGAGTACATCAAGAGCTTCTTGGCTGCCATCCCGATCCGCGAGCTGCAGGCCGACATCAAGAAGGGTATCATAGCATCGACGCCACTGCACCACCGTCTCCAGATCGAGTTCCATTACACCGAATCATGCCCCGAGGAGATCCCGCTGCCTGCTCCATTACCTGCCATTGAAGCTCCCTTTGAGTTCTCCTGGCCTGAGCCGCCTCCTGCCATGGAGGTTACCCTAGCACCCGCAGTCGCCGCCATATAA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035813