BGIOSGA035820

From RiceWiki
Revision as of 08:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035820| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035820, complete gene.| tag = OS12G06...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035820

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035820, complete gene.

LocusTag

OS12G0618400

Ensembl Transcript ID

BGIOSGA035820-TA

Ensembl Protein ID

BGIOSGA035820-PA

Length

2364

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21945386..21947749

Sequence Coding Region

21947740..21947749,21946633..21946691,21945874..21945963,21945386..21945757

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21945386..21947749 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21945386..21947749 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGTCTCAAGATTCAGTTGATGGACCTCAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAGCCCAAGAGTAAGCGCAGGACTGGTGACAAGGCAAGAGGGGAGAAGAAGGCACTCAAAGTTAAGATTAACCTTGCCAGCCCGGCCAAAAAAATTAAGAAAAGTAGCAAAAAGAAGGGCAAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCTAAAGGGCGCTTTCTTCCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTATGACCGCTTCATGAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTATTTTGAAAGGCTGGAAAGGCATGAAGCAATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAG</cdnaseq>

Protein Sequence

<aaseq>MSQDSVDGPQVSGCSATSLGQPKSKRRTGDKARGEKKALKVKINLASPAKKIKKSSKKKGKKGTVAGRIGRKCTLSRDSKGRFLPRESKGGDIGGNATESEVDYDRFMNFQAPDFATILSILKGWKGMKQCNKIRRLKDPDFVPLMNVMSNTGYVTEDDGHYDVLKVLMHADGWSA</aaseq>

Gene Sequence

<dnaseqindica>1..10#1059..1117#1787..1876#1993..2364#ATGTCTCAAGGTGGCAATGCTCTATCTTAATTCATGTTAGCAGTAGGCCTATTCATGGGTTCAGGCTTAAGGTGTAGTTAGGCTAAAGCAAATAGATTGTACACAACTAAGTAGTTTGTCTTGTTTTTTTATGCTTTTGTGTGGTATGTTATGGGTTTTGTGTCTATTGGCAGCTGAGCTCACCTACCTAGGTCAAGCAATGTTTGTGTGAACACAATGCAATACAGTTTTTTCTTTTTTAAGCCACAGGTCAATTGTTAGAAATATCGTCGATCTTATTTGGAATATGGGAGCTTCGATCTTATTTGGAATATGGGAGCTTCTTTAGGAATTGAACTGTTCCTGGAGAAATTCACATGTTCCAAATAGGCTGAGTAAAATAGGATCTTGTTCCTAATTGGAAGCTTGTAGCTGGGGATTATTGCTTTATTTGTCAAATTCAGCCTTGCTTAGCCTGATTTAACATTTAAAAGGTGTTCTTCTATTATGTTTATTCTACATATTACTACAAAAATCGAAATATACACTTATCTGAGAAAGATTTTCCATCGCCATGGATCTGGGAGTTTCCCAGTTATTGTTATAGAAATCATGCTTGATGACAACTTCGTTTTATCACTGAATCACTTCTTTTCCAGGACAACCCTCATATAGTAAAAGGGGTTTTAGTTCTAGTAGCTTCATCTGAATTTCGTTGCATCGTGCATAGATCTGACTAGACTACAAGATAACCATGTGCAAAATAGTACTGATTATCTGCATATAATCATGAATAGGCTTTTAACAGTTTTGATTGGGTAGAAATCTTAATTATAGGTTTTGCAGAAAAATGTCCATATGAAGAGGCAATTAGAGCCTTAACATATCTTACTACCTTGATGAAATTTGGATAGTTTTCTTTTGAAATTTATAGGGATTTAAGTTATCCATGGACAGCTGAAAATTTGTATTATTCTATTCATTTCACCTGTTATTAACTACTTTTACCATATATCTAAGGACCCCTGATGGACTTTATGGATATTGAAAATATACTAAAGCATCGTTTTGACATTTAGATTCAGTTGATGGACCTCAAGTTTCTGGGTGCAGTGCCACGAGTCTTGGTCAGCCCAAGGTATAAAGATATTTCCTAACCTTGTTTACTTAAAAGCACGAATACACATTCAGCTTTAGTTCATAATGCATTTGGTAATTTACCACATTTGCAACGCCTTTCATTATCCCATTTCCAGCTAATGCTTCTTGCCTTGACTTGTCTTAATGTATACGTGCACTAGGGCCTACTTCTCACTGAATAAACAATAAGTTCTAGTTTTCACATGATGAATCGCTAACACAGTTTTTGTTCTGACTAAATTACCTTTGCATACTCCAAACTTTGCTCTAGCTTGATCACAAATTGTGTGGGGTACTATCATTAAAGCAATATACACATGAGTTCACTTGAAATATTGTACCAACACTTCTTAATTGTTTCAGTTTGATACTACCTGTTTTGATGTTGGAACTACAAGTATCAGTACTATAACAAGCATGATCATACAACCTTACTTGAACACTCACGTTAATTTTGCACTTTGGTAAATAACATAATGCTCATTCTCAAATATTTGAATTTTGTATTTAATTTTTCATATTTATGTGACACAAACTTATTAAGAGAATGGTCTATTGGAATATCCTGTCATGATATAGTAAAAGTTTAATATTTTGACTGGAGTAGCTGTTGGAGGAACATGTGGTTTTGTATGATCTCAGGCCCAATCTCTTTTCTGAAATGCAGAGTAAGCGCAGGACTGGTGACAAGGCAAGAGGGGAGAAGAAGGCACTCAAAGTTAAGATTAACCTTGCCAGCCCGGCCAAAAAAATTAAGGTGTGCCTCACTGAACTATTGCAAGGGTCCTATTTTGTACATTAGGGTGTTTCCATCATGCCATACAGTACTTATTTCCCTTCAATAATTTCTGTAAGTGCCACCTGATGATGCAGAAAAGTAGCAAAAAGAAGGGCAAAAAGGGCACTGTTGCTGGCAGGATAGGGAGAAAATGCACTCTCTCAAGAGATTCTAAAGGGCGCTTTCTTCCAAGAGAGAGTAAGGGGGGAGACATCGGAGGAAATGCTACAGAGAGTGAAGTTGATTATGACCGCTTCATGAACTTTCAGGCACCTGACTTCGCTACCATCTTAAGTATTTTGAAAGGCTGGAAAGGCATGAAGCAATGTAACAAGATCAGGCGCCTCAAGGATCCTGACTTCGTCCCTCTCATGAACGTCATGAGCAACACTGGATATGTGACCGAGGATGATGGTCACTATGATGTGCTGAAAGTCTTGATGCATGCAGATGGCTGGTCTGCATAG</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035820