BGIOSGA035840

From RiceWiki
Revision as of 08:10, 27 June 2012 by 127.0.0.1 (talk) (Created page with "{{IndicaGene| GeneName = BGIOSGA035840| Description = Putative uncharacterized protein| Definition = Oryza sativa Indica Group BGIOSGA035840, complete gene.| tag = OsI_391...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

BGIOSGA035840

Description

Putative uncharacterized protein

Definition

Oryza sativa Indica Group BGIOSGA035840, complete gene.

LocusTag

OsI_39101

Ensembl Transcript ID

BGIOSGA035840-TA

Ensembl Protein ID

BGIOSGA035840-PA

Length

4796

Source

Oryza sativa Indica Group

 ORGANISM  Oryza sativa Indica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 12

Location

Chromosome 12:21626023..21630818

Sequence Coding Region

21630761..21630818,21630262..21630374,21629918..21630016,21629784..21629840,21629532..21629687
,21629361..21629445,21628947..21629037,21628689..21628853,21628483..21628605
,21628334..21628409,21628015..21628171,21626809..21627938,21626322..21626512
,21626023..21626221

Genome Context

<gbrowseImage1> name=IndicaChromosome12:21626023..21630818 source=RiceIndica12 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=IndicaChromosome12:21626023..21630818 source=RiceIndica12 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ATGAAGCTCTCTCCGCCGGCGTCAGCGGATATGCCGCAGGCCTTGCCGGAGAACGACGGGGAACAAAGATGTCTGAACTCGGAGCTGTGGCATGCATGCGCTGGGCCCCTTGTGTCTTTGCCAGTGGTCAGGAGCAGGGTCGTCTACTTTCCACAGGGCCATAGCGAGCAGGTTGCGGCATCAACTAATAAGGAAGTTGATGCTCAAATCCCAAATTATCCAAACTTACCTCCTCAGTTAATCTGCCAGCTTCATAATGTCACCATGCATGCTGATGCAGAGACAGATGAAGTTTATGCTCAGATGACATTGCAACCATTGAGCCCGGAAGAGCAAAAGGAGCCTTTCCTTCCAATGGAGTTGGGTGCTGCTAGCAAGCAACCCACTAATTACTTCTGCAAGACATTGACTGCAAGTGACACGAGCACTCATGGTGGTTTCTCTGTTCCCCGCCGGGCAGCTGAGAAAGTCTTCCCTCCACTAGATTTTTCACAGCAGCCTCCGGCACAGGAGCTGATTGCAAGAGATTTGCATGATAATGAATGGAAATTTCGCCATATATTTCGTGGTCAGCCTAAAAGGCATCTCCTGACAACAGGCTGGAGTGTGTTTGTGAGTGCGAAAAGACTAGTAGCAGGAGACTCTGTTATATTTATCTGGAATGATAACAATCAACTTCTTTTGGGAATACGTCGTGCAAATCGCCAACAGACTGTTATGCCCTCTTCCGTGCTGTCAAGCGATAGCATGCATATAGGTCTTCTTGCAGCAGCAGCTCATGCCGCAGCCACAAATAGTCGCTTCACTATTTTCTATAACCCCAGGGCTAGCCCTTCTGAATTTGTGATTCCATTGGCCAAGTATGTGAAAGCTGTTTACCACACACGTGTATCTGTTGGAATGCGTTTTAGAATGCTTTTCGAGACAGAGGAGTCAAGTGTCAGGCGATACATGGGTACAATCACCAGCATAAGTGATCTAGATTCAGTGCGCTGGCCAAACTCACACTGGCGTTCTGTTAAGGTTGGTTGGGATGAGTCCACCACTGGTGATAAACAGCCAAGGGTTTCTCTTTGGGAGATTGAGCCTTTGACAACCTTTCCGATGTACCCCAGTGCTTTTCCTTTAAGACTTAAGCGTCCGTGGGCTTCAGGACTGCCTATGCATGGCATGTTCAATGGTGGGGGAAATGACGATTTTGCACGCTATTCTTCTCTCATGTGGCTTCGAGACGGAAATAGAGGAACCCAGTCCCTGAATTTTCAAGGACATGGAGTCTCACCATGGCTTCAGCCAAGAATAGATTCTCCATTGCTGGGCCTTAAGCCAGACACGTACCAGCAAATGGCTGCAGCAGCACTGGAAGAAATTCGATATGGGGACCCTTCAAAGCAGCATCCAGCTACTCTGCAATACCAACAGACTCATAATCTGAACAGTGGATTAAATTCTCTGTTTGCAAGCCATGTTCTAGGGCAGGTGCAGTTTCAACCTCAGCAGTCACCCCTGCAAGTTGTTCAGCAAGGCCATTGTCAGAACACTGGTGACTCTGGGTTCCTTCAAGGTCAGCTTCCACGGCTGCAGTTGCATAACACTCAGCAGCTGCTAAAGGAGCAAGAGTTGCAGCAGCAGCAAAGACAGCATGTTTTACAAGAGCAATCTAGTCAAGAGATGCAACAGCAGCTCCCATCTAGTGATCATCGTGTTGCTGATGTAGCTTCTGAGTCTGGATCTGCTCCTCAGGCACAATCATCATTGCTTAGTGGATCATCATTCTACAATCAGAACCTCTTAGAAGGAAATAGTGATCCCCCTTTACATCTACACAACAATTTCCACAACTTCTCTAACCAGGAACCCTCAAACCTTCTTAGTTTGCCTCGAAGTAGCCAATTAATGGCATCAGATGGGTGGCCTTCAAAGCGATTAGCTTTAGAATCTGCTGTTCATCCTGAAGCTCCGTCCATGCACCCCAAGATTGAGAAAGTAAATCACCAGGGTATTTCTCATTTTCCTGGCGCCTTTCCACCACAATCAGCAAGAGGCTGTTCCATCGTCCAGGATTGCAGGGCAGATGCTGAGAACCGCCTACTTTCATCATCATTTGAACTCCAGGATGGCATGACAAGCATCATAACTGATGCTAACAGAGAAACTGATACTATGGCCATACCTTTGTTGAGATATAGTGGTGCAGATTTGACAACTGAAAACACCTTAGCAACCTCCAATTGTTTAGGTGAATCTGGAACGTTCAATCCTCTTAATAACATATCTGTAAATCCATCACAAGGAGCAACCTTTGTGAAGGTTTACAAATCAGGGTCCCTTGGGAGATCACTTGACATCTCCAGATTCAGCAGCTACTGCGAGTTACGTAGTGAGCTTGAGCGTCTCTTTGGTCTTGAAGGCCAACTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTCGACCGGGAAAATGACATTCTTCTCGTCGGCGACGATCCATGGCAGGAGTTTGCAAATAGCGTATGGTGCATCAAAATACTCTCGCCACAGGAGGTGCAGCAGTTGGTTCGTGGTGGAGACGGCCTTCTGTCCTCACCTGGAGCAAGGATGCAGCAGAGCAATGCCTGCGACGACTATTCTGCAAGCCACAACATGCAGAATATCGCCGGAAACATTGCATCTGTAGCGCCTCTGGACTACTGA</cdnaseq>

Protein Sequence

<aaseq>MKLSPPASADMPQALPENDGEQRCLNSELWHACAGPLVSLPVVRSRVVYFPQGHSEQVAASTNKEVDAQIPNYPNLPPQLICQLHNVTMHADAETDEVYAQMTLQPLSPEEQKEPFLPMELGAASKQPTNYFCKTLTASDTSTHGGFSVPRRAAEKVFPPLDFSQQPPAQELIARDLHDNEWKFRHIFRGQPKRHLLTTGWSVFVSAKRLVAGDSVIFIWNDNNQLLLGIRRANRQQTVMPSSVLSSDSMHIGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEESSVRRYMGTITSISDLDSVRWPNSHWRSVKVGWDESTTGDKQPRVSLWEIEPLTTFPMYPSAFPLRLKRPWASGLPMHGMFNGGGNDDFARYSSLMWLRDGNRGTQSLNFQGHGVSPWLQPRIDSPLLGLKPDTYQQMAAAALEEIRYGDPSKQHPATLQYQQTHNLNSGLNSLFASHVLGQVQFQPQQSPLQVVQQGHCQNTGDSGFLQGQLPRLQLHNTQQLLKEQELQQQQRQHVLQEQSSQEMQQQLPSSDHRVADVASESGSAPQAQSSLLSGSSFYNQNLLEGNSDPPLHLHNNFHNFSNQEPSNLLSLPRSSQLMASDGWPSKRLALESAVHPEAPSMHPKIEKVNHQGISHFPGAFPPQSARGCSIVQDCRADAENRLLSSSFELQDGMTSIITDANRETDTMAIPLLRYSGADLTTENTLATSNCLGESGTFNPLNNISVNPSQGATFVKVYKSGSLGRSLDISRFSSYCELRSELERLFGLEGQLEDPVRSGWQLVFVDRENDILLVGDDPWQEFANSVWCIKILSPQEVQQLVRGGDGLLSSPGARMQQSNACDDYSASHNMQNIAGNIASVAPLDY</aaseq>

Gene Sequence

<dnaseqindica>1..58#445..557#803..901#979..1035#1132..1287#1374..1458#1782..1872#1966..2130#2214..2336#2410..2485#2648..2804#2881..4010#4307..4497#4598..4796#ATGAAGCTCTCTCCGCCGGCGTCAGCGGATATGCCGCAGGCCTTGCCGGAGAACGACGGTATATATCCTTGCTAACAATTTCGACATTGTTTCAGTTCTGCACTTTCTCAGCTTGTGTTGATGCCTGCATTGTAAAGTGGATTATGGATCATGGAGCTTTGTGATTCTGCACTTTGAGTTGTTTGTGCATGATTACATAATGCATAAATGAGTCTCCATTGCTGCCTTGCACACACTCCGCACATACACACACAAAGAAAAAAGAAAGAAAAAAAAAGAACTACTCCTACATTACTTGGCTCTGTTCATTGCCCTCATGTTATAACATTATTTGATACTGACTGAACCTCCTACTGTCTGTGGGCAAGTACAAATAGTAGCTTCACATGAACTTAACTTTCTGGTGGTTTGCTGTTCAGCTCATGTGTGTTTGGCATGTTGCAGGGGAACAAAGATGTCTGAACTCGGAGCTGTGGCATGCATGCGCTGGGCCCCTTGTGTCTTTGCCAGTGGTCAGGAGCAGGGTCGTCTACTTTCCACAGGGCCATAGCGAGCAGGTCAGTCACTTGGTTTGTAGTCTGTGCACATCTCTTTCATTATGCTAGGCATGGCCGGATTTTGTTGACTCGAATTTACTAGAATTTATAAAAGAAGGTAGAACAGCTCTGCTTTTGCATTTGTGCATCAGTACATAATAGGGCAGAGGATTGTCTTTATTGTTTGCTCAGTGCATCATTAAACTTAATATGGCAGAAGAATGAACTGAAACTGTACTGTCTAAAGTAATTTTAGTTCTGTGCAGGTTGCGGCATCAACTAATAAGGAAGTTGATGCTCAAATCCCAAATTATCCAAACTTACCTCCTCAGTTAATCTGCCAGCTTCATAATGTCACCATGCATGTGAGTTCACTCTTAAAGAAACCATCATGTAGCTTCTTAATAAGCAGCTTATGATAATTCACCTGGTGCTTTTGCAGGCTGATGCAGAGACAGATGAAGTTTATGCTCAGATGACATTGCAACCATTGAGCCCGGTATTTGACCACTGCTTTGCACTTCTAGCCTTATTTCTTTTAAAAGGGCAAAGATGTTACAAGGATTATGTATTTGTCATGTAATCCTGTTGACAGGAAGAGCAAAAGGAGCCTTTCCTTCCAATGGAGTTGGGTGCTGCTAGCAAGCAACCCACTAATTACTTCTGCAAGACATTGACTGCAAGTGACACGAGCACTCATGGTGGTTTCTCTGTTCCCCGCCGGGCAGCTGAGAAAGTCTTCCCTCCACTAGTATGCCTTTAAGCTCAGTCTTTTTTTTGGTAGGAAATGTTCATTTGCTATGTGTTCTTCAAATTGACTCCTTTAGTTCTCTGTAGGATTTTTCACAGCAGCCTCCGGCACAGGAGCTGATTGCAAGAGATTTGCATGATAATGAATGGAAATTTCGCCATATATTTCGTGGTATGTAACTATGGCCGACACACATAGAACTGATTATGAGTTGTTTGTGTACACAAAAAAATTGACATAAAATCATGTACTATGCCTTTTAGATAGCATTTCCATTAGACATGACATCTATCCGTTTTGCTCTTTTTTCTTTGTTACCAAGATCTGTTTATGCATTTTTATCTGGCTAAGAAATTACCTGGACATGCTATAATGACAATACTGCAACTAGCCTCCTTCTGTTCCTGCCTTGCAGAATTGTTGAATTATGAAATTATATTGTGAGGGTATCTTCTTCTATTGAACTTTCAATTGGCTATGCATTTGTCGTGCAGGTCAGCCTAAAAGGCATCTCCTGACAACAGGCTGGAGTGTGTTTGTGAGTGCGAAAAGACTAGTAGCAGGAGACTCTGTTATATTTATCTGGTACCACCCACTTTATTCCTTATTTAAATTGTATACTGTTGCTAGAGGTTGTACTCATTGCTGAGACTTAATTACCTTTATCATTTTTACCAGGAATGATAACAATCAACTTCTTTTGGGAATACGTCGTGCAAATCGCCAACAGACTGTTATGCCCTCTTCCGTGCTGTCAAGCGATAGCATGCATATAGGTCTTCTTGCAGCAGCAGCTCATGCCGCAGCCACAAATAGTCGCTTCACTATTTTCTATAACCCCAGGTAAATGTACTGCAATCTTACAGCAGAACCTTTAATGTTTTATTTTATTTCCATATTTAATTGACATGGGCATCCTTTTTCAGGGCTAGCCCTTCTGAATTTGTGATTCCATTGGCCAAGTATGTGAAAGCTGTTTACCACACACGTGTATCTGTTGGAATGCGTTTTAGAATGCTTTTCGAGACAGAGGAGTCAAGTGTCAGGCGGTAAGCTGATATTAAGCACACAGCATGAACCGTGAAAGCTCCATTAATTCTTATATTTACCTCTTACTTTCAGATACATGGGTACAATCACCAGCATAAGTGATCTAGATTCAGTGCGCTGGCCAAACTCACACTGGCGTTCTGTTAAGGTAATATCTGCTAAATATATTTTGTGGTCTCTACAGAAATGATGTTATCTTGTTCCATTATCTAGTAGTCTGTCAAATCTGTTATCACATCCCTCATGGATCCCTTTCTGTGGATATGTTTTCCTTGTGATTTTTTTTCATTTTGGATTTATGGCGCATTAGGTTGGTTGGGATGAGTCCACCACTGGTGATAAACAGCCAAGGGTTTCTCTTTGGGAGATTGAGCCTTTGACAACCTTTCCGATGTACCCCAGTGCTTTTCCTTTAAGACTTAAGCGTCCGTGGGCTTCAGGACTGCCTATGCATGGCATGTTCAATGGTATGCTGATTGATGGCCGGAACACTAGCACGCAAAATTCTAAGAGCATACTCTTTAACCACTTCTTTTTCTGCAGGTGGGGGAAATGACGATTTTGCACGCTATTCTTCTCTCATGTGGCTTCGAGACGGAAATAGAGGAACCCAGTCCCTGAATTTTCAAGGACATGGAGTCTCACCATGGCTTCAGCCAAGAATAGATTCTCCATTGCTGGGCCTTAAGCCAGACACGTACCAGCAAATGGCTGCAGCAGCACTGGAAGAAATTCGATATGGGGACCCTTCAAAGCAGCATCCAGCTACTCTGCAATACCAACAGACTCATAATCTGAACAGTGGATTAAATTCTCTGTTTGCAAGCCATGTTCTAGGGCAGGTGCAGTTTCAACCTCAGCAGTCACCCCTGCAAGTTGTTCAGCAAGGCCATTGTCAGAACACTGGTGACTCTGGGTTCCTTCAAGGTCAGCTTCCACGGCTGCAGTTGCATAACACTCAGCAGCTGCTAAAGGAGCAAGAGTTGCAGCAGCAGCAAAGACAGCATGTTTTACAAGAGCAATCTAGTCAAGAGATGCAACAGCAGCTCCCATCTAGTGATCATCGTGTTGCTGATGTAGCTTCTGAGTCTGGATCTGCTCCTCAGGCACAATCATCATTGCTTAGTGGATCATCATTCTACAATCAGAACCTCTTAGAAGGAAATAGTGATCCCCCTTTACATCTACACAACAATTTCCACAACTTCTCTAACCAGGAACCCTCAAACCTTCTTAGTTTGCCTCGAAGTAGCCAATTAATGGCATCAGATGGGTGGCCTTCAAAGCGATTAGCTTTAGAATCTGCTGTTCATCCTGAAGCTCCGTCCATGCACCCCAAGATTGAGAAAGTAAATCACCAGGGTATTTCTCATTTTCCTGGCGCCTTTCCACCACAATCAGCAAGAGGCTGTTCCATCGTCCAGGATTGCAGGGCAGATGCTGAGAACCGCCTACTTTCATCATCATTTGAACTCCAGGATGGCATGACAAGCATCATAACTGATGCTAACAGAGAAACTGATACTATGGCCATACCTTTGTTGAGATATAGTGGTGCAGATTTGACAACTGAAAACACCTTAGCAACCTCCAATTGTTTAGGTGAATCTGGAACGTTCAATCCTCTTAATAACATATCTGTAAATCCATCACAAGGAGCAACCTTTGTGAAGGTATGCATTTTCAACTTGTGTGTTAGCTTGCGTTAATTCTTCTCTCTGCATTTCTTTTTTCAATTTTCACTGATTGCGAACATTGGTCGCTAAAAGTACTTTACTAAGTGGATAAATAACAAACATTTTAGTAGGTTGATGGTAGCAAAGGAGGCAATTATTTTTTAAAGTTTTGTATGAAGTTTGGAAATGCCTGTTTCTCTTCTTTTTACTACCCTACTTAACATGTCTGTGAGTGTGAGCTGCTCATTTATTCTATATGATCTGGCTAATATCTTCTGCATTTTCTTCAATAGGTTTACAAATCAGGGTCCCTTGGGAGATCACTTGACATCTCCAGATTCAGCAGCTACTGCGAGTTACGTAGTGAGCTTGAGCGTCTCTTTGGTCTTGAAGGCCAACTGGAGGACCCTGTAAGATCAGGCTGGCAGCTTGTATTTGTCGACCGGGAAAATGACATTCTTCTCGTCGGCGACGATCCATGGCAGTAAGCACTTACAAACCTAAAATGTTTCGTATGCAAACACAATATTTGTCAATGTTCAAAGCAAACAAACATGATATTCTATGCCGTCTTTTTTTTTCAGGGAGTTTGCAAATAGCGTATGGTGCATCAAAATACTCTCGCCACAGGAGGTGCAGCAGTTGGTTCGTGGTGGAGACGGCCTTCTGTCCTCACCTGGAGCAAGGATGCAGCAGAGCAATGCCTGCGACGACTATTCTGCAAGCCACAACATGCAGAATATCGCCGGAAACATTGCATCTGTAGCGCCTCTGGACTACTGA</dnaseqindica>

External Link(s)

EnsemblPlants:BGIOSGA035840